Os12g0228400

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0228400| Description = Similar to mitochondrial chaperonin-60 [Oryza sativa (japonica cultivar-group)]| Version = NM_001072969.1 GI:11548789...")
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Gene Name

Os12g0228400

Description

Similar to mitochondrial chaperonin-60 [Oryza sativa (japonica cultivar-group)]

Version

NM_001072969.1 GI:115487899 GeneID:4351822

Length

5192 bp

Definition

Oryza sativa Japonica Group Os12g0228400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:6975961..6981152

Sequence Coding Region

6976736..6976801,6978409..6978462,6978539..6978628,6978730..6978810,6978887..6978943

Expression

GEO Profiles:Os12g0228400

Genome Context

<gbrowseImage1> name=NC_008405:6975961..6981152 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:6975961..6981152 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aacttgacagaggctctctctccttacttcattaccaaccaaaagaaccagaaatgtgaactagatgacccactgatcttgatacatgaagtgtccaaccttcatgctgtggcgaaagtgttggagttagctctgaagaagcaaaggcctctgcttattgttgcagaggatttagaaagtgaggcattgggtactctgattattaacaagctttgtgcaggcattaaggtttgtgcagtcaaagctcctgggtttggggagattgttagcacaagaacaaagtcttgtgtggcgccttctggggaatttgaaccattccaatcctggcgcaaagttcctggaacttga</cdnaseq>

Protein Sequence

<aaseq>NLTEALSPYFITNQKNQKCELDDPLILIHEVSNLHAVAKVLELA LKKQRPLLIVAEDLESEALGTLIINKLCAGIKVCAVKAPGFGEIVSTRTKSCVAPSGE FEPFQSWRKVPGT</aaseq>

Gene Sequence

<dnaseqindica>4352..4417#2691..2744#2525..2614#2343..2423#2210..2266#atcctcactcctttcttctttcctttcccctctcttcaccagccgcacgccgtcgcagaggcgctcaatctccggcgtcggtatccactccagcaactcccatagcctggacacgtcagtgatgatgggcttgaggtagtccacgtacagctcgtgtgcgcgctctgccctggacatcgacatgcgcgtctcccgctgcttttggtcgcggtagagctgggcgaagaagaggtgctcaaccttgttgggcacggtgtcgtaggggtagtcggcgagggagggagcagagcgacggcggtgaagacggcgggagcaaggcgacggctcggagatggtgtgcggtggtgacgtgcgaggtcgccgcccgctgcccacctcccgtcggccggcgcgcgcgctgcctcctctcccgccggcccccgcgcgccgctactcctctcccgttggctgccctgacgagctcgcctcatccctcgcggcgctccgtcggccgccctctccaccggcacggcgcgcgccgccgctcctcttcctcccacccaccggccgggcgtgtgccgccgatcctctcccaccggccgccgcgcgccacaccctcccgccggtctccgcgccactgctagagatggtgagtcaaacgctctggacaacttggcatttttgcagcactattatcccgtcaattttattatattgaccacctattttcatctgaaaaagaactggctgaagtttaaatctgtcatacctatgaattaactcttctatactgagtgttatgccatattgctattacacatgttttttttccttttagttttatatatcgaagaacttgtctttttttgattcatacagcccctgtttcttttgtcgttcactcatgttatatttgtgttgtctatataccatgaggaattcctattccttcttgaggctagtttcttgcatgactagctgtgatggaatcaggggccgagctaaagtgagggagggggttcccaggcacccggttccaaagatcattttatctattatctatagtcatcctatgtttgtcagttgtgcaccccctcagttcaattaagcagacaaagcaagaaggcaaaaagagactgcatatttgcagccctgtgctatagaatgatactactactacttgctaatgcatgcacaccataaatcaacaatagccaatgcatagagcccggcgcttgcctcttccaacttttcttaattaatcacttcaaaatcaaatcaaataaacagaatgcccttatgattttagtctttaccttttcttttaattacactctaataatcaatattgacattacgttctctattttggtaagaactcttttttatcgctacaatttttttacctacttttgtttattgaattattttggccggacttttgtttattgaattattttggccggaatacagtgagtcttttattgcattattgatgcttaaaattaattacttcattgtagcaccacatatataaggttaaacttatggtacaatggtgcacccccctcaatgttgctctagctccgccactggatggaatacttgctttattttgttgtctcctctaggcatcatggaatacactgtgttcggaggagggggttaggaaccctcctctccggcacgcaaaacaaagtttattttattgcatgattaattaagtattaactaattttttaaaaaatagattaatataatttttttaaacaactttcatatagaaagtttttacataaatcacaccgtttagcagtttgaaaagcgtgcgcgcggaaaacgatagaggtgggttgggaaaatggagggaagaacacagccctaggttgtgttcggaatccccctttcccaactcacccctctcttttcgcgcgtatgcttttcaaactgctaaatggtgcgttttttgcaaaaagtttctatacgacagttgtttaaaaaatcatattgatctatttttttaaaaaatagctaatactaaattaatcacgtgctaatgaaccgctccatttttcgtgcggagactcgccagcagcgaacatagccaagtcttttagcaagctcgatcaacctatgtatggatgccatgatattttgatctaagattcatgaaatatttgataggatggtaagaccctctacaatgagcttgaagttgtagaaggcatgaaacttgacagaggctctctctccttacttcattaccaaccaaaagaaccagaaatgtgtaagtatttctgctgatgttaatagacttctttaacacaaattatcttggttgtaatatatttcatatgttacaggaactagatgacccactgatcttgatacatgaagtgtccaaccttcatgctgtggcgaaagtgttggagttagctctgaaggtatttttttattagtaaagctgatttttgttgttatgaccttattttgcaatttaatattctatctgcagtctgatggcccataatttctgctaaaacagaagcaaaggcctctgcttattgttgcagaggatttagaaagtgaggcattgggtactctgattattaacaagctttgtgcaggcattaaggttggtgctatccctcctttttctttgtgacccccattattaatatattatctggtctcattgtgtgaaaatgcaggtttgtgcagtcaaagctcctgggtttggggagattgttagcacaagaacaaaggttttgggactagtttttcatttccattagcatcaaacttcaacatggctgttggggtgtgtgtgtgtgtatgggctagtagcttacaccataaggcatagattagagatggcaatggttccccgtcctccgattccccgcggtgaatcctcccattaggaggcgggggtggtataaaatttgtctccacggaggattaaacggagtaaaaacaccctccatcgggtctggcaggggcgggtctggttcaccgtcccccgtccccgctctccgtggaggcccgacataatagtgtatgtgtagttttaccatgcatatttggcccatctggcccatagaaaccaggcccaacaccaagaatatataaagcatctgcaaaaccctagccattccaatccttctcccttctgtgttccttccctagtccccacgtcggcgccgactcccgatctcgtaggcaggcccgccgcgcgcctgccgctcggcacccgcgccgctaggtcgtcggctcgccgcgcgcccgcgcagggccgccggctctccacacccgcgccggcaggtcccagcgcgtccgcgccaggtcgccggctcgccgcgccgccaggtccaggcttgcccgcgcagggctgccggctcgccacacccgcgccggcaggtcgcggcgcgcccgcgccgcaaggtcccggcgtgcccgtgtagggccactggctcgctgctccgccacgccccgacgccgccgcacgcccgcaccaggtccaagcgccgtcctccaccctccgtccatccaccagcaagaaaggggaaaacgatgaccagccgctagacgccgccatggcctcgtcttcacactcgcggggatggaggctccacggggagaaattacccgcacggaggcggtgatggtgaaagatgttgccccgttacatttcacggtgatggtgatgggaaaaattctcctccgcggaggcgggtctggtggtgtaacctccgacggggaattccccgttgccatctctagcatagatacatatgagaagagattgcttacatccaaaggtagctatgcaaataccaaaatagatgctaaacacacaagacttaggctgtgtttagttccacgtcaaaattggaagtttgaagaaattggaacgatgtgacgaaaaagttgaaagtttatgtgtgtaggaaagttcgatgtgacggaaaagttggaagtttgaataaaaaagttagaatctaaacaaggccttaggccgtgtttagttccccatctaaaattcttttgatgtatacggacacacatttgaagtattaaatgtagactaataacaaaacaagttatagattccgcctgtaaactgcgagacgaatttattaagcctaattaatctgtcattagcaaatgtttactgtagcatcatattgtcaaatcatggcgcaattaggctcaaaagattcgtctcgcaatttacatgcaaactgtgcaattggttttttttcgttcacatttaatgctctatgcatgtgtctaaacatttgatttgatatttttggccaaaattttttggaatctaaacacacccttaatctgttattctccccctaagtcttgtgtggcgccttctggggaatttgaaccattccaatcctggcgcaaagttcctggaacttgacccgcccaagagacttggtgagaaggtcggtgagccgatccttggtgttgatgtagctggccttgatgctcccctcgtccaagcagctccgaatgaaatgatacttgatgtggatgtgcttgctgcgctcatggaagatgagattcttcgccaaggccaaagcggacttgctgtccaccctgagctccactgctttagcatctctgcccaggagcgagatcgcccaacagctgagccaacaagagagctgtatctaaggatgacatagtgatccttgatggagctggagataattaagaaggccattgaagagagagagagctgagcaggttcattctatgctagtttagttttacatgaatccctcaaacatgaagccacatgaatcccttcagtctagagtcgtgtggcttcatgtctagacaactcggcatttttgcagcactgttattccatcaattatatagtattgacttttttttcatcttaaaaagagttggctgaaacttaaatctgtcatagctattaattgaaacctctatatgagagttatgtcatattgctgttacatgtagtttctttcctttaattttacagattgaggaacttgcctttttggtccatacgacccgtgttctaaccatactttgggttctctaatcattcagctttgtagatttttgcgtttggctgtgtacactcttgactcttgtggaaaactggactgtacaggctggaatgatatccattatctaaaagaagtgttgatttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0228400, RefSeq:Os12g0228400