BGIOSGA009552

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Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009552| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009552, complete gene.| tag = OsI_141...")
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Gene Name

BGIOSGA009552

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009552, complete gene.

LocusTag

OsI_14100

Ensembl Transcript ID

BGIOSGA009552-TA

Ensembl Protein ID

BGIOSGA009552-PA

Length

3471

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38789861..38793331

Sequence Coding Region

38793128..38793331,38792014..38792159,38791752..38791847,38791042..38791298,38790505..38790725
,38789861..38790229

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38789861..38793331 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38789861..38793331 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAGTTCAAGCAAAAACTTCCAGTCATCAAGCAAACCAGGCAGTGACAGGAAGTACCAGGGTGCATTGGTTGCTTCTCCAGCAAAAGCCATTTCACCCAAGACAGTCAAGCAGATCGTGCCAGGAAAACATTTAATCTTGAGCGGGGAGTCTACAAGTCATCTGGCATCTTTTTTGGTAAAGGTTATTGCCTTGGAAGTAAAATTATCGACACCACTGTTGTTTCTTTCTGTCACAACAACATTATGTGACCGGTCCTCTAAGCGCAATGATGAATTGGGTAGCAATACAGAAGCTCCTGATGTACCTTCTGAATCAGATGAAACAGCATCAACTTCTGGTATAAGGGATGTTGCTGATGGCACAAAGGATACCGAGCCAGATAACTGGCTCATATCACTGTTCAAGGAACTTGAGAAACAAGGCATCACTTTGCCTGAAAGGTTCAATGAGGATGAACTACGCAGATTTTACATTGCAGCCAATGGTGACTTTTCAAGTTTGCTCTCTTCAGTTAAGAAGACAATTCGTTGGAGGGAAACCTTCCATATACTTACATTGCACGAACTCGAGAAGTGGTCCCATTTAGTTTTTTGGCATGGATTCGATACTATGCTTCGGCCCTGTTTAATAGTCCGTCTTGGTCTTGCATGCTCTAGTCTAGCCCCTTCTGATAGACCTCGGTTTGGGCAAGCAGTAGTTTCTCAAATCGACAATGGTATTGTATACTTGACCAACAAAGAAGATCCGAGAATAACTGTTTTGCTGGATTGTCATGGGATTTCTCCATTCAGATTTCCAATGCAAATGATGAGGTCGTTTATCACTATAGTTCAAGAAAACTATCCAAATCGTCTTGGGGTACTATTTATTGTGCGTCTTCCTCCTGTTGTCAGAGTAATTGCGCAGACTCTTATTCAGGTTCTGAAACCATCCACAAAGCAGAAGTTGCGTTTTGAGGGAGAATCATATAAGAAGACATTAGCCGAGTTCTTGCAGATTGTGCCAACTTTTCTTGGTGGCAAATGCAGCTGCCCGCAATGTGAGAAGCCGCGTAATATTTCAGTAATACAGGCAGGGGAAGGCAGCAAGAGCCAACCTCGCCAGATAACCATTGATGATGGATCACCTGTCGCAAGCATGAACTTTGATGAGGCGGAGCTTCCATCTCCTTATAGCTGCGAGAATGCCATAAGGGCTGCCATCATTGGTGTTCTAATGCTGTGGGTCTTCATTGCATTTCTCGCTGGGATGAACGACCCAGAGTCCATCTCGTCCCATGCCCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MASSSKNFQSSSKPGSDRKYQGALVASPAKAISPKTVKQIVPGKHLILSGESTSHLASFLVKVIALEVKLSTPLLFLSVTTTLCDRSSKRNDELGSNTEAPDVPSESDETASTSGIRDVADGTKDTEPDNWLISLFKELEKQGITLPERFNEDELRRFYIAANGDFSSLLSSVKKTIRWRETFHILTLHELEKWSHLVFWHGFDTMLRPCLIVRLGLACSSLAPSDRPRFGQAVVSQIDNGIVYLTNKEDPRITVLLDCHGISPFRFPMQMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGESYKKTLAEFLQIVPTFLGGKCSCPQCEKPRNISVIQAGEGSKSQPRQITIDDGSPVASMNFDEAELPSPYSCENAIRAAIIGVLMLWVFIAFLAGMNDPESISSHAP</aaseq>

Gene Sequence

<dnaseqindica>1..204#1173..1318#1485..1580#2034..2290#2607..2827#3103..3471#ATGGCCAGTTCAAGCAAAAACTTCCAGTCATCAAGCAAACCAGGCAGTGACAGGAAGTACCAGGGTGCATTGGTTGCTTCTCCAGCAAAAGCCATTTCACCCAAGACAGTCAAGCAGATCGTGCCAGGAAAACATTTAATCTTGAGCGGGGAGTCTACAAGTCATCTGGCATCTTTTTTGGTAAAGGTTATTGCCTTGGAAGTAGTAAGAAGATTTTCAAAAGCAAGATGCCCTTTTATATGGAATTCTATTCAAGCATTGCAAGTTCTTGGGTACCCTCCATTTAGGTGGATTCAACAGTGGGCGCCACTCAAATTTATTGTGCAAGGAATTCAGGTTGTTTTACCTCTCGGTCCTTCAAGGCCTTAACTCTCTTTTTTTAGATAATGGAAGTAAAGACCTTGATTCTCTTGATTTCCTAGATACACACAATTATTTTTCTTCTATCAGCTTGTGCTTTTGAAAATTGCTTGCTTAAATGAGATATATTTCTCTTGTTGCCTCTCAACTAAGTAGCAATTACCAATAAGAACTGTCACTTATGTTGATTGTAGCATTTTATATTCCACTTTTGACACTTCTGGTTGCAACCATAACATGCACCAGGTTCAGATGCAAGCCACACACTCTGTCCACTTAATCATGCTCAACCTGGACTTAGATTTTCACGGAGAAATGAATATAGGTCCAGCACTATTATTCTTCACATAGGCTTTTAGGCTGCTATAATTTTCTTTTCACCATTACTATATTCTTTGCTGACAGCAACACTAGACCATTGTATTACAGGTTTTTACATATGAACGATTCCATTTGGCTTGGAGTTTGTTTTGGCATAGGTTATCTATTTATCATGCATGTTGGGCTTTTTGAAGCATGTTCTGGGCTTCCACTTAGTTAAAGATTAAGAAACTAGAAATGACCATGTCTTACAATTTCTTGCGACGTATGTTAGCTACTTACTGAGTTAACATAGTGAATCCCAGATCAATTCATGTGAATAATATGATGGATATGTCCATCTATGCTAGACTAAACCTGCTTCAATCCTCGTTTTGAACATGGTTGTGGGTTTTTACTAGTTTGATGAATTGGTGCACTGTGACACTTCTGCTATGCTGTTTCACTTGTTTCTTTAATAATTTCTTTCTGAATATTTTTCTCCTATACAGAAATTATCGACACCACTGTTGTTTCTTTCTGTCACAACAACATTATGTGACCGGTCCTCTAAGCGCAATGATGAATTGGGTAGCAATACAGAAGCTCCTGATGTACCTTCTGAATCAGATGAAACAGCATCAACTTCTGGTATAAGGTTGGTTAAGACTAAACTAGAAGTATCTCTTAGCTGAGGAATGTGTTGCTAGCTTCTTTTCATTGAATCATAGCGTTCTAGTTCTGACCATATCACATCACAATAATGAAATAAACTTACGGAAAGAGGGCTAAATTTTCATCTAGTGTTTTATTTCTTGTTTTAGGGATGTTGCTGATGGCACAAAGGATACCGAGCCAGATAACTGGCTCATATCACTGTTCAAGGAACTTGAGAAACAAGGCATCACTTTGCCTGAAAGGTAAATCTAAAAGTTTGTTTGTTTTTATGAACGATACATTTCTATATGTATCAATTATTCCCATCCAGGGTGCAGGATTAAAAAAATACAACATCTTGAAATGGATTTTCTAATGCAGCTCTTGTTATTGTGATGTATCCAGTACTAAAGTGCCAACTTACATATAAGAGTGGGAAGTGCACAGATGTGTACAGAAGTGTGATATAGGTCAAATAAAGCTTTATATATTTTGAATTTCATGAGTTGTATCTTGTGGGTATAGCTGAGGGTTTCAGGCTATGTAAGCCTAGTTTGGTGTATGAGCTGGTGTTGAGCTTATTTGCATTGAGCTTAGTGTTCAAACATGTCTTTCTGTGCGATTCTGAAGTCTTGTTATAGTTGTATATACACACCAGTGCCCTGAGCTGCAAAAATGACATATAGCTGAGAGAATTTACCTTATGGACATTTCAGGTTCAATGAGGATGAACTACGCAGATTTTACATTGCAGCCAATGGTGACTTTTCAAGTTTGCTCTCTTCAGTTAAGAAGACAATTCGTTGGAGGGAAACCTTCCATATACTTACATTGCACGAACTCGAGAAGTGGTCCCATTTAGTTTTTTGGCATGGATTCGATACTATGCTTCGGCCCTGTTTAATAGTCCGTCTTGGTCTTGCATGCTCTAGTCTAGCCCCTTCTGATAGACCTCGGTTTGGGCAAGCAGTAGGTAACTTCTCAGCCTGCTCTATACACCCATTCATTTATGTCCTAGATTGTCTTCATGTGATAGTTTTTATCATCTTTGAACTGGGAAGGAACATATAGTGTGGGAAATTGCTTTGTTGCTTGCAGTAAGATATTTTCTTTTTCAATAAATATGGTTCATCTAGCAAGATACTGTCCATCAGCAGTTAGTTTGACAGAAAGAAGGCCATCTTTCTTTAACAACATTGTCTATCCAAGTTTTGAGCAGATAATAGGATTCTGTCCGGCTGATTTACCAAGAGGATCACTAATAGTAATCACTAACATTTTCTTTTCAGTTTCTCAAATCGACAATGGTATTGTATACTTGACCAACAAAGAAGATCCGAGAATAACTGTTTTGCTGGATTGTCATGGGATTTCTCCATTCAGATTTCCAATGCAAATGATGAGGTCGTTTATCACTATAGTTCAAGAAAACTATCCAAATCGTCTTGGGGTACTATTTATTGTGCGTCTTCCTCCTGTTGTCAGAGTAATTGCGCAGACTCTTATTCAGGTAACTTTCTCCACCTACATGTCATCTCAATAACTATTTAACTGTCCCCACTGACCACAAATGAACAAGAGCATGTCCCACAGACATTTGTTAGGGGGGGCATAGTTCATTCATGAGCACAATTGCTTGAGTTTTGACTACTTGGACTATCTGCCTAAACAAGGATGGCTACAAATCAGAACTAGCATTAGTTATGACTGTGAGATGACAAACAATTGTGTCCTGCTTCCTCACCACATCTAATGTTACTTATATGTTCTTTCTAATCTACCTAGGTTCTGAAACCATCCACAAAGCAGAAGTTGCGTTTTGAGGGAGAATCATATAAGAAGACATTAGCCGAGTTCTTGCAGATTGTGCCAACTTTTCTTGGTGGCAAATGCAGCTGCCCGCAATGTGAGAAGCCGCGTAATATTTCAGTAATACAGGCAGGGGAAGGCAGCAAGAGCCAACCTCGCCAGATAACCATTGATGATGGATCACCTGTCGCAAGCATGAACTTTGATGAGGCGGAGCTTCCATCTCCTTATAGCTGCGAGAATGCCATAAGGGCTGCCATCATTGGTGTTCTAATGCTGTGGGTCTTCATTGCATTTCTCGCTGGGATGAACGACCCAGAGTCCATCTCGTCCCATGCCCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009552

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009552&oldid=54375"