BGIOSGA009559

From RiceWiki
Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009559| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009559, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009559

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009559, complete gene.

LocusTag

OSJNBA0094J08.5

Ensembl Transcript ID

BGIOSGA009559-TA

Ensembl Protein ID

BGIOSGA009559-PA

Length

3129

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38692918..38696046

Sequence Coding Region

38695944..38696046,38695786..38695818,38695429..38695651,38693256..38693376,38692918..38693175

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38692918..38696046 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38692918..38696046 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCCCGCGGCGCAGGTGGCGTCGAACCCGCGGACGGTGGAGGACATCTTCAAGGATTACTCGGCGCGGCGCGGCGCGCTCGTCCGCGCGCTCACCTCAGATGTGGACGAGTTCTTCGGGCTCTGCGACCCAGATAAGGAGAATTTGTGCCTGTACGGCCTCGCCAACGGGAGCTGGGAGGTGGCGCTGCCGGCGGAGGAGGTGCCGCCGGAGCTGCCCGAGCCGGCGCTCGGCATCAACTTCGCCCGCGACGGGATGAACCGCCGGGACTGGCTCTCCCTCGTCGCCGTCCACTCCGACTCGTGGCTCGTCTCCGTCGCCTTCTTCTTCGCCGCGCGGCTCAACGGAAACGAACGGAAGCGGCTCTTCAACATGATCAATGATCTACCTACTGTATATGAAGCATTGGTTGACAGGAAGCACGTCAGGGATAGGTCTGGTGTCGATAGCAGCGGAAAATCCAAACATTCAACAAAGAGAACAGGCGAAGGGCAGGTGAAGCGCTCCAGGGTTGTCGCAGAGGAGTACGAGGACGACGACGAAGAACACAACGAGACATTCTGCGGAACTTGCGGTGGCCTCTACAACGCGAACGAGTTCTGGATCGGGTGCGACATCTGTGAGCGGTGGTTCCACGGCAAATGCGTCAGGATAACCCCGGCTAAGGCGGAGCACATCAAGCACTACAAGTGCCCTGACTGCAGCAGCAGCTCCTCCAAGAAAACCAGGCTATAG</cdnaseq>

Protein Sequence

<aaseq>MAPAAQVASNPRTVEDIFKDYSARRGALVRALTSDVDEFFGLCDPDKENLCLYGLANGSWEVALPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLVSVAFFFAARLNGNERKRLFNMINDLPTVYEALVDRKHVRDRSGVDSSGKSKHSTKRTGEGQVKRSRVVAEEYEDDDEEHNETFCGTCGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSSSKKTRL</aaseq>

Gene Sequence

<dnaseqindica>1..103#229..261#396..618#2671..2791#2872..3129#ATGGCCCCCGCGGCGCAGGTGGCGTCGAACCCGCGGACGGTGGAGGACATCTTCAAGGATTACTCGGCGCGGCGCGGCGCGCTCGTCCGCGCGCTCACCTCAGGTAAGGTCTCCCCGCGTCCGCGTCCGCGTCCGCGTCCGCCTCCTCCAGTTCGTGCGGCACTGACTCCCTGCGCAGATCTAACGCTAGGCTTCGCGTCTGTCTGTCTCTCGTGTGCTGCCGTGCAGATGTGGACGAGTTCTTCGGGCTCTGCGACCCAGGTGAGTTGAGTGAGGGGGTGGATTCGATTTCCGCTCGCGGCGAGGTGTTCGTCCGGGTGCGTGTGGGCGGCGGTGGATCCGGGTGTGTGGTGGGGGGGGGGGGGGACTGAGCGGATCGGATTTGCCTTTTGTAGATAAGGAGAATTTGTGCCTGTACGGCCTCGCCAACGGGAGCTGGGAGGTGGCGCTGCCGGCGGAGGAGGTGCCGCCGGAGCTGCCCGAGCCGGCGCTCGGCATCAACTTCGCCCGCGACGGGATGAACCGCCGGGACTGGCTCTCCCTCGTCGCCGTCCACTCCGACTCGTGGCTCGTCTCCGTCGCCTTCTTCTTCGCCGCGCGGCTCAACGGAAACGAACGGTACTACTCGCTCGCATCCGCAATTCCGCATACCTTCCCCGAATTCAATTTCTTGGCTGGAAAAAAAAGAAAGTCAGTAAAATTTTCAGTGTCTCTTTCCTGACAGAAAGATTTGTGCAGTTAAAAGCTGCCTTTCGGTACAGTAGTTTGCTTGATTGTTAGGTGAAGGAGGATTCGCGTGATCGATTTCATGGTCTAATTTTTGTTTCAGTTGGCGCATGTGTCTGCATGTGCACATGTATCCTGTGCTCTTCTTTTTGTTTCCTTTCTTTGCTTTGAGTGAATTGGAGTCATGCGTTCTGGATGTGCTGGCTGTAGTGTACTGGCCGTTCTATGTGAGTTTTACATCCTTACCCTTCTTTCATGATAGAATTATCAATTCATACTCTAGGGTTCATATTGATTCATGGTAGCTGCTCGTAAGAATTTAGTGCCTATCCTATCCCATTTTAGTTTTTGAATTGAAAAACTTTTCCAGAACTTGATTTAATGAGTCGCAGAGTCTAGCAAATGCAGGCTTTAAAGATTGAAGTAGCACCTACAAGACTCTTATATTAAATAAAGGGCCATTCATTTCTGCATTTTTCTGGCATGTCAACTGCGCCACAACTTACTCCATTTCATTGTGGTTGGAGAAGGTGTACATTTACTAGTACTAGTTGATATAGGAGTAATGTGTATACGGAGCAAATATGACAATACGTGCATATGCCTACATAGTACTACTCCCGTCTTAAAATAAGTTCACTTTTATACATAAATCTAGACACTTATTTTGGGACAGAGGTAGCAAGCCATTACTTGATTCCTTGGTCAAGTGCTATGCAAGTAGGTCTCTATCATTCTCCTCTTAGAGCTTTTGGCATTTTAGCTGGCATGATATATCATATATGACCAAATTATTCTAAGATTTTTGTAGCATTTGTTACCGGAATTTTTAGATTAGTAGTGGAGTTTAGCACACAATTCATGCCAGAAAAATATGCTTTCCATCTACTTATGTACTTCATGATGTATCTGTGCTGAAGTTAAATTTTCTTTACTAAGGTGAATAAATCAATGAGGTCATGACAAAAGGAGTACTTGATGCTCGCATCGATGTTAAGCATCAAAATGCCCCTTATTTCAGCTTTCTTGTTCATCCCATCGTTGTTCATTTGTCTAGAGACAGTTGTAGCTAATTGCGGGTATGGGATGTTATATCTAGAACTTAGGAGCACATAATGACATTTTCTGCTAGACATAATCCTACCACTTTTATTCCAATATAGTCTACTGCTGGTATGTCGACAATGCAATCAAAGGGATTAGGCAACATATTTAGGCTTTACTTATTGTTCAACTCTGCGCATATAGTTTGTGGCAGAGGTGTTCTGTTGATAAAAGCGATAACTTGTTTCTTCTTAGTTTAAGAAGTCTGCGTATGCTATGTCCTGGTATGCAATTAGGGTCGTAATCCAGAATCTCGTGTTTTCCACATCAATGTATTTCTCTGTACTAGTTTAGTTTTATGTTATTCATTTTTTTCTTCTTATTTTTCAGGATTAGATGTGTATTTTAACTGAAGAAATGATGTATAGTATTTCTGTTTATGCTACTGAGTTACTCTATTATACTACATGTTAGTCACTTAGTCTCGTCTTTGGCATGCTATCCATGATGGTGTGTTACTATTCTCATGTACATGTATCTGCCCCATCACCTTAAAATTCAATGTTTGCCAAAAAAAAAGAAGTTCCGCAATGCTTACGAGTAGTTTCTTTGCTGCTGACTGTATGTTGACTTTAGGCTGTTACTGAATACTCTCTCCGGCTAATAATATTAGTCATTTTGAACAAGGGTAAAGTTAAACTTAAAAATCTTTGACTATCTAAAATATTTATCTTAAAAATATGGAAACATATGTGTAGATTAGTCTTAAAAAATACTTCAATAAAATTATATATTTGTTGATATTTCTATATATATTATAATAGAAAATAGTTGCTAAAGTTACTTTTTGGAGACCATGCTCTTGGAGGGAGTTACAATATTGCTCCTTTTGTTTCTCAGGAAGCGGCTCTTCAACATGATCAATGATCTACCTACTGTATATGAAGCATTGGTTGACAGGAAGCACGTCAGGGATAGGTCTGGTGTCGATAGCAGCGGAAAATCCAAACATTCAACAAAGGTTAGTATTTCCCTCCCCCAAAATTCAGAAACTTCAAATGCAGTTACTTCAGATTTTGTAACCTAAGCTACAATACACAGAGAACAGGCGAAGGGCAGGTGAAGCGCTCCAGGGTTGTCGCAGAGGAGTACGAGGACGACGACGAAGAACACAACGAGACATTCTGCGGAACTTGCGGTGGCCTCTACAACGCGAACGAGTTCTGGATCGGGTGCGACATCTGTGAGCGGTGGTTCCACGGCAAATGCGTCAGGATAACCCCGGCTAAGGCGGAGCACATCAAGCACTACAAGTGCCCTGACTGCAGCAGCAGCTCCTCCAAGAAAACCAGGCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009559