BGIOSGA009566

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Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009566| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009566, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009566

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009566, complete gene.

LocusTag

OSJNBA0094J08.26

Ensembl Transcript ID

BGIOSGA009566-TA

Ensembl Protein ID

BGIOSGA009566-PA

Length

3726

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38568612..38572337

Sequence Coding Region

38571464..38572337,38570810..38570928,38570614..38570733,38570352..38570439,38570019..38570110
,38569818..38569922,38569240..38569349,38568935..38569022,38568801..38568836
,38568612..38568695

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38568612..38572337 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38568612..38572337 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTTCATGTTCGCATAAGGGAGAAGACGAGCATAGCGAGTTTGTTGAGTTCCCGGAGGAACTGGAGTGGTGGTGGGGTTGATGGTGGAAAGAAGAGTGGCAAAAGAGAAGGTGCTAAAACGAAAGGAACCAGGACAACTGGTAGGAACAAGAGTGAGAAGAGAGAAGAGCACAAGGAGGCACGGGGAAATGCCGGACAGAGGAGGAGGTGGAGCGACACAAATGGTCAATCAGATGCGAAGAAGAACGCATCACAGGCTGTGAGGAGGAAAAGGAAGGGTGATCATGACTCATGGAATGGTGATCACAGTGACACGCCGTATTCTAAATCAAAGCTGACCAGAAATGGCCCTTCCACCATGACCCGTGGAAAGGCTTCTGCTAGAAAAGGTGATAGATTTAGGTCTGAAACTTTGGATGAGGATGATTTGCATTCAAGGAAAAGGAGTAACAGTATGGTTTCCAGTGTAAGTAGAGGGGGAAGGAGTAACAGCATGGTTTCTGGTATAACTAGAGAGGGAAAGAGTCAATCAGTGTTCAGTAGGAATGCAGAAGCATCATCCAAAGGGAAGAAGTTTGATACACCTACCAGAGTCAGTCGCCAAAAAGAGGCTGCTACAGATGCCAACTTGGATGATCATGGCGCCGAAAGCAAGAAGTCGAATGATTCTGGCCAGATTGCTGAAGAGAAGCCCCGCCCTCGTCGTACTCGAGTTCTGGACAAGACTGGGAAAAAAATTAGGGTTGCAAAGAAGGATCCAGTTTCTGACATTGAGGAAACCCTTCCTCCCAAGAAGAGGAAGCGGATGAAACTGGATCCCTATGACACATCAAACAAAAGACTTGAGGATTCTACTGCCAAACAGGATGTTTGTAGTCCAGAGAAGATTCCTGAAAAAAGTCCGCCTGAAGAGACTGAGACGTCTATAAATGCTAAATTCCGTGCTATACAGCCAAGTTCCTCAATCATTTCATATGTGGAAGACAATCTCCTAGGTCGTAGGCGCCTAAATGAGATAAAAAATGCTGGCTACAATGTTAAGCTCTCTGCCCCTTTGGATAATGTTCCCTTCTCAACCAGCCTTGAACGTGAGCGCATAGAAGAAAATGTGTTCAGAAATAAGTTGGAGTTCTTTGCTGCAGCAAAAATTTCGTCATCATTTCCTCCTCCTACGCTCCCAGAGATAGCATTTGCAGGGGTATCAAATGTTGGGAAATCATCACTACTGAATGCACTTACAAGGCAATGGGGTGTTGTGCGAACATCGGATAAGCCAGGACTTACTCAGACAATAAATTTCTTCCGGCTTGCATCAAAGCTATGCCTTGTCGATCTGCCTGGATATGGTTTTGCTTATGCAAAGGATGAAGTTAAAGACTCATGGCAAGAACTTGTGAAGGAGTATGTTTCAACCAGGGTCGGCCTAGAAAGAGTGTGCCTTCTTGTGCACACTAAACGTGGAATGAAACCATTGGACTACGAGCTTGTAGACCTAATGGAAAGGTCCAAGACGCCATATCAGATTGTATTGACCAAGACTGATTTGGTTTTCCCTATTGACGTTGCTCGCCGTGCTGTGGAGATCCAAGAGAGCCTGAAAAAGAACAAGTCAGTGGTCAGACCGGTGATGATGGTGAGCTCTAAAACGGGAGCTGGTGTGCGCAACCTGAGAGGGGTGCTTGGGAAGATTGCTCGCTTCATCAAACCATAA</cdnaseq>

Protein Sequence

<aaseq>MPLHVRIREKTSIASLLSSRRNWSGGGVDGGKKSGKREGAKTKGTRTTGRNKSEKREEHKEARGNAGQRRRWSDTNGQSDAKKNASQAVRRKRKGDHDSWNGDHSDTPYSKSKLTRNGPSTMTRGKASARKGDRFRSETLDEDDLHSRKRSNSMVSSVSRGGRSNSMVSGITREGKSQSVFSRNAEASSKGKKFDTPTRVSRQKEAATDANLDDHGAESKKSNDSGQIAEEKPRPRRTRVLDKTGKKIRVAKKDPVSDIEETLPPKKRKRMKLDPYDTSNKRLEDSTAKQDVCSPEKIPEKSPPEETETSINAKFRAIQPSSSIISYVEDNLLGRRRLNEIKNAGYNVKLSAPLDNVPFSTSLERERIEENVFRNKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFRLASKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVRPVMMVSSKTGAGVRNLRGVLGKIARFIKP</aaseq>

Gene Sequence

<dnaseqindica>1..874#1410..1528#1605..1724#1899..1986#2228..2319#2416..2520#2989..3098#3316..3403#3502..3537#3643..3726#ATGCCGCTTCATGTTCGCATAAGGGAGAAGACGAGCATAGCGAGTTTGTTGAGTTCCCGGAGGAACTGGAGTGGTGGTGGGGTTGATGGTGGAAAGAAGAGTGGCAAAAGAGAAGGTGCTAAAACGAAAGGAACCAGGACAACTGGTAGGAACAAGAGTGAGAAGAGAGAAGAGCACAAGGAGGCACGGGGAAATGCCGGACAGAGGAGGAGGTGGAGCGACACAAATGGTCAATCAGATGCGAAGAAGAACGCATCACAGGCTGTGAGGAGGAAAAGGAAGGGTGATCATGACTCATGGAATGGTGATCACAGTGACACGCCGTATTCTAAATCAAAGCTGACCAGAAATGGCCCTTCCACCATGACCCGTGGAAAGGCTTCTGCTAGAAAAGGTGATAGATTTAGGTCTGAAACTTTGGATGAGGATGATTTGCATTCAAGGAAAAGGAGTAACAGTATGGTTTCCAGTGTAAGTAGAGGGGGAAGGAGTAACAGCATGGTTTCTGGTATAACTAGAGAGGGAAAGAGTCAATCAGTGTTCAGTAGGAATGCAGAAGCATCATCCAAAGGGAAGAAGTTTGATACACCTACCAGAGTCAGTCGCCAAAAAGAGGCTGCTACAGATGCCAACTTGGATGATCATGGCGCCGAAAGCAAGAAGTCGAATGATTCTGGCCAGATTGCTGAAGAGAAGCCCCGCCCTCGTCGTACTCGAGTTCTGGACAAGACTGGGAAAAAAATTAGGGTTGCAAAGAAGGATCCAGTTTCTGACATTGAGGAAACCCTTCCTCCCAAGAAGAGGAAGCGGATGAAACTGGATCCCTATGACACATCAAACAAAAGACTTGAGGATTCTACTGCCAAACAGGATGGTGCGAATGCTATCTTACTTTTCTTACTTAGGAGTCTGGAATGTTCTGTAATACAGAATTATGTACATAAAAGTAAGGAATCAAGTAAATGTAGTGTGTCCTATCTATATTGCTAGATATTCACCCCTTTAAGATTGAAAATGATGATAAAAAGAAAGGCCCTTTTCTTTTTTAAAAGAAAGAACCAGGAATTTGGAAGAAAATATGTATAGGAATACATATGCTTTTAACCTCTTGCAAGGTATGTTTTTATTTAGCTAGATAATTTATCCCTATTAGAACTTGGAACTATCTGCGCATGTTTTGTGAATTATAAAGATTGTTGAAGGCAACAACTTCCTCTTTCAGCAGATAGCACCACAAAATTCTTATGTCTGTTTTTTTTTTCTTAACAATATAAAATCTGTTCATGAACTTCTGAATCAACTCACCCACATCCAATTCGTCTTATTTATTTTAGTCTTGGCCTTATGAGGGAAATTTTGATAATCAATTTGCTGCCCTTTTGGTGTAACTTCCTTTCTTTTGTTTTTAGTTTGTAGTCCAGAGAAGATTCCTGAAAAAAGTCCGCCTGAAGAGACTGAGACGTCTATAAATGCTAAATTCCGTGCTATACAGCCAAGTTCCTCAATCATTTCATATGTGGAAGACAATGTACATTTTATTACCTCCTCACTCTTATTTCTCCATGTGGATGCATTTCTGGTGACATAATGCAGTCTTTTTGCAGCTCCTAGGTCGTAGGCGCCTAAATGAGATAAAAAATGCTGGCTACAATGTTAAGCTCTCTGCCCCTTTGGATAATGTTCCCTTCTCAACCAGCCTTGAACGTGAGCGCATAGAAGAAAATGTAAGAAACATACAATATGATCAGTACTAGAAAATATTCTTCTGCTTTTGTTTTAGCTGGGCATGCCTGGTTTCTACATTATTTGAGTTGCTTTTCTAGCTGTGTAGTATCTCTTTGCATAGATTGTTGGGATCCACTTGTATTTATTGTTATCTCACAGAAAACTATTAACAGGTGTTCAGAAATAAGTTGGAGTTCTTTGCTGCAGCAAAAATTTCGTCATCATTTCCTCCTCCTACGCTCCCAGAGATAGCATTTGCAGGTAACATCAGAAAAATGAAGTTTGGCACGGTGAATCTTTGAATTTGATATTTAGTTTAATCACATTATCTTCCTGTGCACACCGTTTAGGTTTGATGTATGTGACTTTGCTGGTATTTATTTTTCTCTGGAAGGGATTATGGTTGATGAGTGTTTAAAGCTGCATGATCTTTTTCTCAACTATCGTAGTGTTTCCACAAAGTTATTTCCTGCCTTCTAATAACTTAACTTTGAAATTTTAGGGGTATCAAATGTTGGGAAATCATCACTACTGAATGCACTTACAAGGCAATGGGGTGTTGTGCGAACATCGGATAAGCCAGGACTTACTCAGGTTTGTCGAATGAAGCTTGTGTGTTTTATTGTAATTAGTTTGGGCATCCAAACAATCCACGAGTCTATCTGTTTATGCTTATTATTCCTTATTCAGACAATAAATTTCTTCCGGCTTGCATCAAAGCTATGCCTTGTCGATCTGCCTGGATATGGTTTTGCTTATGCAAAGGATGAAGTTAAAGACTCATGGCAAGAACTTGTAAGTACCCTAAATCATGAAAAAAAAATCTTGTAATGAATCATATTACCTCACATCGTGCAATTTGATGAAATTGGATATCTAACCCACGTCCATTGTATACTGGTATATCATATGCTCAATAACTTCTGTACATTTTACTTGCTAAGAACTGATGAAATTTCCTTAGCTCAAGACTTCACAACCCTTCTGAGAGTTACTTTCTGATCTCTTTCTTCCTCTAGTACATTCCTTTGGTATCCACGTCCACTTTAGTTATTCAGCTGGGGGACAATTTTAAAATCAAGGATCTAATTGCCATCATTTATGACTGAACAGATTGTTTTTTTACTTTTGCACATTAAACAAACAATATCCTGGTAACTGTCTAGTACTATTTGCATATGCCCACTGGATCTGTATGGGAACACAATTTCCCATCATACTTTGAGTTGTTTAGAACACTAAGCTTTTAAAGTTGGTTTGTAGGTGAAGGAGTATGTTTCAACCAGGGTCGGCCTAGAAAGAGTGTGCCTTCTTGTGCACACTAAACGTGGAATGAAACCATTGGACTACGAGCTTGTAGACCTAATGGAAAGGTTTGCTTTCAAATAAACCACCTAGTTTCAAGTTTCACGGTTCTTTCAAATTTTTAGTTAACATTTTGTGATATTGATGTAAATACATCTGTCAGTTCATTGAAAATTCATTGATGATTCTTTATTTTCTCAGAGCATTTCATAGGCCTCTGATCACATATATTGAGTAATGTTTACTTCAGTTTCTGCTGTAACGTTTCTAATCAAACCACTGTAGGTCCAAGACGCCATATCAGATTGTATTGACCAAGACTGATTTGGTTTTCCCTATTGACGTTGCTCGCCGTGCTGTGGAGATCCAAGAGGTTCTCTTCCCCCCTGTTCCCCCCTTCCCTCTTACTCTCCTTCTCATGCACCCTCTTGAGTTTTTACCTAACAGAATCACTTGCACTCTCTTTTACAGAGCCTGAAAAAGAACAAGTCAGTGGTCAGACCGGTGGTGAGCTCTTGAATCATTTCCTTCATATCTCATGTGCTATATCTTTATTTGAAAAGAATCTCATGTGCAATATCATACATGATATAAAAATGACACGTTTTGCAGATGATGGTGAGCTCTAAAACGGGAGCTGGTGTGCGCAACCTGAGAGGGGTGCTTGGGAAGATTGCTCGCTTCATCAAACCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009566