Os12g0230100
| Gene Name |
Os12g0230100 |
|---|---|
| Description |
Similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (Fragment) |
| Version |
NM_001072974.1 GI:115487909 GeneID:4351828 |
| Length |
5749 bp |
| Definition |
Oryza sativa Japonica Group Os12g0230100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:7094912..7100660 |
| Sequence Coding Region |
7095112..7096290,7096667..7096756,7096858..7096933,7097181..7097398,7097533..7097748 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:7094912..7100660 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:7094912..7100660 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcaggcaccctgctccagccggttgccctcggaacaacttttgcaggccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttggcgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcatagcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagatcaagacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaagctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcggtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgctcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattgggaggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttggagctttcattggaagaagctcgtcagctaggacacaactatattggatctgagcacttgcttcttggactgctccgtgagggtgaaggtgtagcagcccgtgtgctcgaaagccttggagccgatcctagcaatattcgcacgcaggttatccgaatgattggcgagactacagaagctgttggtgcaggagttggaggagggagtagtggcaataaaatgccaacacttgaggagtacggaactaatttaacaaaattagcagaggagggaaagctagatcctgttgttggaaggcaaccccagattgagcgtgtcgtacaaattctgggcagacgaacaaagaacaacccatgcttaattggagagcctggtgttggaaagacagcaattgcagaaggccttgctcaacgcatttctactggtgatgtgcctgaaacaattgaaggaaagaaggtcattacccttgatatgggacttcttgttgctggtacaaaataccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgatgagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggtgctattgacgctgctaacattttaaagccagcattagcaagaggagaactacagtgtattggagccaccacacttgatgaatacaggaagcatattgagaaagacccagcattagaaagacgtttccagcctgtaagagtgccagagccaacagttgatgaaaccatagaaattctcagagggcttcgggaacgatatgagatccatcataaacttcgttacactgatgatgctctgatttcagctgccaagctatcttatcaatacatcagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgtaaggcttcgacatgcccaggttcctgaagaagctagagagcttgacaaggagctcaagcaaatcacaaaagataagaatgaagctgtccgtagccaggacttcgaaaaggctggagagttacgtgatcgtgaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaagcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacattgtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagcttcttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagccataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgcaagcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgacttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcgattacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaagcagtacttccgccccgagttcctcaaccgtctcgacgagatgatcgtcttcaggcaactcaccaagctggaggtcaaggagatcgccgagatcatgctcaaggaggtctttgacaggctcaaggccaaggacattgacctccaggtcaccgagaagttcaaggagcgtatcgttgacgaaggcttcaacccgagctatggtgcgaggccgctaaggagggccatcatgaggctcctggaggacagcctcgcggagaagatgctagctggggaggtgaaggagggtgattctgccattgtcgatgtggattccgaggggaaggtgattgtactgaatggccaaagtgggttgcctgagctttcaactccggctgtcactgtgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MAGTLLQPVALGTTFAGRVSGQRWKSHGTRRPPSMLAMSLSRPV KMAAFVGLRSVHSFSVTPVTNFRSTVASYRSRRGRRARFVTRSMFERFTEKAIKVIML AQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGF VAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADP SNIRTQVIRMIGETTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQP QIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMG LLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPA LARGELQCIGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRGLRERYEIH HKLRYTDDALISAAKLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELDKE LKQITKDKNEAVRSQDFEKAGELRDREMELKAQITALIDKSKEMSKAETESGETGPLV NEADIQHIVSSWTGIPVEKVSSDESDKLLKMEETLHQRVIGQDEAVKAISRSIRRARV GLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGR TVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRPE FLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNP SYGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGQSGLPELST PAVTV</aaseq> |
| Gene Sequence |
<dnaseqindica>4371..5549#3905..3994#3728..3803#3263..3480#2913..3128#2523..2708#2327..2449#2116..2231#821..1376#ggaggcccgtcttctccctagtctctcttcttcccccttatctctagggaggaaagaaaaataacaagaacgcaccttttgtctctctcctctcctccgaggtaaggtaaagcttctccccccctatccccatggcgtccatcctagctcgttttctctctgtaaattatatcgttcttggttggttcctgttgttggctgccgggtgggggggattgtggtgcggaaaatttgagttcttggatggattagcgatcttttttttttagttcttggtattggcgatccctagagatgttatctctttcctgtatgggaataaagattacttttcttttgtttgtttgggtgttggtgttgtgaggatgtttgtggatagggatgctgtgttgtatcggtgatctttatccaattctctatcttgggtgtgtggttcagtgattgaacagatgggagtggtagttctttttgctgggagttttgtagcagtgcaatttccttctgaactaatcatagagtagaaagaagaggaaacaaatatatactggagaaatagctatttatgatttgcaatttaatgaatatctttttagatgatgtgcaaatttagtgaagaagatgaagcacagtatctttggtttagaaacgaaagaataataagcagagcatgttttgtagtgttattgtagattccatactctccattgtgcttatctctgagcatttagcttacttccattggggatcaagtatctagattagtttctaactatatcagaattgttggtcccgaacaggtttggggaagctacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcaggccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttggcgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcatagcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagatcaagacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaagctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcggtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgctcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattgggaggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttggagctttcattggaagaagctcgtcagctaggtatgtcttgcattttgattgatttgattttatcactaatttttgtttttattgtacctaatcacacttcaaaaattgaaatccaatagacggacagtgacatctatgtatcaaaaagtctcaatgtgtattgcttagctatccaatcattctcactcactaattaccaacaatccatggatcactctggtttggtgatgaaactgaacctaatcagaagggtagtgactttcataaatagtagttggttattgttgctgtcacacttttggccctaaccaacatgttgctttctaaatgggctgaattggaagtcaccaacatatacttcaagacatcatattcttgttaaatatgtactactaaaagtgctaacttctcctcttacggtaaagtaaaagtaaaaagacgagttacaatggactagttgcatgattatgtaccttgttaatttggtttgccacatctgttgttcttgtattgtttggaattctcttattcattatgggaactattcccttcgcattggtgtattcattggcttatcggtgttactcatattgaatacatggttgctaagctgctgactgttcacatgttaacaaaagaaacttttatatcactatggattttgtatgccgtgatgtgatgcatctgattttcttattatatttcaacatatgagtgtatgacatagaagatcattggttttccagacttgatgcccttatgtttccaggacacaactatattggatctgagcacttgcttcttggactgctccgtgagggtgaaggtgtagcagcccgtgtgctcgaaagccttggagccgatcctagcaatattcgcacgcaggtaaatgatgtgcatatatctgaattttttctcctctctgtacgagtagtctttgtttttctttagcatttataacgaacataacatgcatctaggttatccgaatgattggcgagactacagaagctgttggtgcaggagttggaggagggagtagtggcaataaaatgccaacacttgaggagtacggaactaatttaacaaaattagcagaggaggtaatgtttttgtcctattgcaacatagtagcacttgtgcatgcataattgttaactctgataatctctgtagggaaagctagatcctgttgttggaaggcaaccccagattgagcgtgtcgtacaaattctgggcagacgaacaaagaacaacccatgcttaattggagagcctggtgttggaaagacagcaattgcagaaggccttgctcaacgcatttctactggtgatgtgcctgaaacaattgaaggaaagaaggtatactttgtttctttaattgttcatgatatacccaataccatatgcattaatccttatatttcctctgtgagttgtaaacatcttagcgtaggcttgattgtggcccctttatgtgttaggtctttctgtgctctcttgcttgggcttttgtgtaattagtgagaaaattatctcatatttatttgaacttatttactgcaggtcattacccttgatatgggacttcttgttgctggtacaaaataccgtggagaatttgaagaaagattaaagaagctgatggaagaaatcaagcagagtgatgagataatactatttattgatgaagtccacactctcataggagcaggagcagctgagggtgctattgacgctgctaacattttaaagccagcattagcaagaggagaactacaggtatgtggatggtactctggtctatttgttgtttaatatatgcactatctaccatcattgtgtcatgctgaacctcttgatgtcttcttagttactataatgtctcacaatatattctctttgtttgatttcagtgtattggagccaccacacttgatgaatacaggaagcatattgagaaagacccagcattagaaagacgtttccagcctgtaagagtgccagagccaacagttgatgaaaccatagaaattctcagagggcttcgggaacgatatgagatccatcataaacttcgttacactgatgatgctctgatttcagctgccaagctatcttatcaatacatcaggtgtgtgaattacttggttataagctataaaatatcacctcgttgagcgcgcatattgttcgtggaccttctgtagcatttcaataaaatgtttgtgaggagtttcccagttgaaagattaaattattgaacaggacatatgttactatcagagtcaacaactcaactgtctattgaataaaatatagcttgactactatatatatcattcagattttatttatctgacacattattttgtttgcagtgatcgtttcctcccagataaagcaattgatttgattgatgaagcaggttcacgtgtaaggcttcgacatgcccaggtattgaatttggtcatatgctaccatttgtttggatgttccacacattttgcaatttcttgcatgctctacacaatatctgagtccagccatttctacaggttcctgaagaagctagagagcttgacaaggagctcaagcaaatcacaaaagataagaatgaagctgtccgtagccaggacttcgaaaaggtaactgcctatggatgagctactagatttttatctgtcttcaagttcgtaaagcaacttaactgtttaaatgcttactgaattactatccgttgttatgtgaaatgacaattataattcatacatggcatagttaattaaggtcatctaggaattctttgtacattccatcaaaacaaagtttctatttaagttgatgactgtctactgttcatcaaactgtttcttgaaattctatccaagtagtagtgtctgtgcatattgccttcccattacttcgcccatatacataagtcaatgcttgtcaatttgccttttgtttgatagaaatgataacttataattggttggatatatttgaatttgttgacattaggctggagagttacgtgatcgtgaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaagcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacattgtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagcttcttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagccataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgcaagcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgcagcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggagaggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggtggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatcgaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctgactgacagcaagggaagaacagtggacttcaagaacacacttctcataatgacttcgaacgtcggaagcagcgtcatcgagaagggtggtcggaagataggtttcgatctcgattacgatgagaaggacagcagctacagcaggatcaagagccttgtcgtcgaggagatgaagcagtacttccgccccgagttcctcaaccgtctcgacgagatgatcgtcttcaggcaactcaccaagctggaggtcaaggagatcgccgagatcatgctcaaggaggtctttgacaggctcaaggccaaggacattgacctccaggtcaccgagaagttcaaggagcgtatcgttgacgaaggcttcaacccgagctatggtgcgaggccgctaaggagggccatcatgaggctcctggaggacagcctcgcggagaagatgctagctggggaggtgaaggagggtgattctgccattgtcgatgtggattccgaggggaaggtgattgtactgaatggccaaagtgggttgcctgagctttcaactccggctgtcactgtgtagtagttcatatatactgcagagtgttaagagatgcagtgcttttcattcagatatatttctgcatagttagcaacttagcataactgtatatatagtatatacaaatcaaaggaggaggaaacaccagctgattcctggtttctcatgtttgggacacctttttttttattaacaataatttcatatggtagagggatctt</dnaseqindica> 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| External Link(s) |
