BGIOSGA009577

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Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009577| Description = BGIOSGA009577| Definition = Oryza sativa Indica Group BGIOSGA009577, complete gene.| tag = | tid = BGIOSGA009577-TA|...")
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Gene Name

BGIOSGA009577

Description

BGIOSGA009577

Definition

Oryza sativa Indica Group BGIOSGA009577, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA009577-TA

Ensembl Protein ID

BGIOSGA009577-PA

Length

1554

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38453128..38454681

Sequence Coding Region

38454070..38454681,38453653..38453810,38453128..38453215

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38453128..38454681 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38453128..38454681 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGAGATGNCCAAGCACCTGCGCCGCCGCGGCCTCGCCGTCGTCGTCGCGGTGATCGACCCGCCCGACAACGACGCCACCTCGGCCGACGCGACGGCGCGCCTCGCCGCGGCCAACCCGTCCATCACGTTCCGCCTCCTGCCGGCGCCTCCCAGCCCGGACGCCGCCGCGCACCCGGCCAGGCGCGCCCTCGACGCGCTCCGCCTGGCCAACCCCGTGCTCCGGGAGTTCCTCCGCTCGCTGCCCGACGCCGCCGACGCCCTCCTGCTCGACGCGTTCTGCGTCGACGCGCTCGACGTCGCGGCCGAGCTCGCCATCCCCGCCTACTTCTTCTTCCCCTCCGGTGCCAGCGCCCTCGCCGCCTTGCTCCACCTCCCGTATTACTACCCCGACGTGCCGTCGTTCAGGGAGATGGGCATGGCGCTCGTCCGCCTCCCCGGCATGCCGCCGCTCCGCGCCGTCGACATGGTGGCGACGGTGCAGGACAAGGAGAGCGACGCGACCAAGGTCCGGCTGTACCAGTTCAAGCGGATGGCGGAGGCGAAAGGCGTGCTCGTGAACAGCTTCGATCGGCTGGAGCCCAAGGCCCTGAACGCGCTCGCCGCCGGCATTCTTAGTGAGAAGGGCTACGTTAAGCGTATGAAGCCTAATACCTTCAATCTACAAAACCGGGGAACGATCGGAAAATCTGTTGGAAAGATGCGAATGAACGACAATACATCCGATTTCATTGTCTGCCAAACACATGATCATGTCCTTTACTTCAGTGACAAGGGAATAGTATACTCAGCACGTGCTTATAAGATACCTGAATGCACAAGAGCTGCGACTGGAACTCCACTGGTACAGGTATAG</cdnaseq>

Protein Sequence

<aaseq>MVEMXKHLRRRGLAVVVAVIDPPDNDATSADATARLAAANPSITFRLLPAPPSPDAAAHPARRALDALRLANPVLREFLRSLPDAADALLLDAFCVDALDVAAELAIPAYFFFPSGASALAALLHLPYYYPDVPSFREMGMALVRLPGMPPLRAVDMVATVQDKESDATKVRLYQFKRMAEAKGVLVNSFDRLEPKALNALAAGILSEKGYVKRMKPNTFNLQNRGTIGKSVGKMRMNDNTSDFIVCQTHDHVLYFSDKGIVYSARAYKIPECTRAATGTPLVQV</aaseq>

Gene Sequence

<dnaseqindica>1..612#872..1029#1467..1554#ATGGTGGAGATGNCCAAGCACCTGCGCCGCCGCGGCCTCGCCGTCGTCGTCGCGGTGATCGACCCGCCCGACAACGACGCCACCTCGGCCGACGCGACGGCGCGCCTCGCCGCGGCCAACCCGTCCATCACGTTCCGCCTCCTGCCGGCGCCTCCCAGCCCGGACGCCGCCGCGCACCCGGCCAGGCGCGCCCTCGACGCGCTCCGCCTGGCCAACCCCGTGCTCCGGGAGTTCCTCCGCTCGCTGCCCGACGCCGCCGACGCCCTCCTGCTCGACGCGTTCTGCGTCGACGCGCTCGACGTCGCGGCCGAGCTCGCCATCCCCGCCTACTTCTTCTTCCCCTCCGGTGCCAGCGCCCTCGCCGCCTTGCTCCACCTCCCGTATTACTACCCCGACGTGCCGTCGTTCAGGGAGATGGGCATGGCGCTCGTCCGCCTCCCCGGCATGCCGCCGCTCCGCGCCGTCGACATGGTGGCGACGGTGCAGGACAAGGAGAGCGACGCGACCAAGGTCCGGCTGTACCAGTTCAAGCGGATGGCGGAGGCGAAAGGCGTGCTCGTGAACAGCTTCGATCGGCTGGAGCCCAAGGCCCTGAACGCGCTCGCCGCCGGCGTCTGCGTTCCCGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAACAAATTTGCTACCCCACGACGTTCTTTCATAGAAGATTCAGCAAGCACTGAAGTTGATGATCTTGATATTATTCCTAATGAGGAAATGCTTTTGGTGAGAAACGTCTGTATTCATGTGTGCTTCTGGTACTTCTTTTTTTTTTTTGCATCACTACTATTCACCTGACGGAATGTATGGCACCTGAAGATTCTTAGTGAGAAGGGCTACGTTAAGCGTATGAAGCCTAATACCTTCAATCTACAAAACCGGGGAACGATCGGAAAATCTGTTGGAAAGATGCGAATGAACGACAATACATCCGATTTCATTGTCTGCCAAACACATGATCATGTCCTTTACTTCAGGTATGCAGTCTGAAAGGCATTCTGATCATTAAATCTTCCAGCATGTTAGAATGGAGGTGATTCTATGCCAAAATATTTCTTGTTTCCCAAAACCTGGAGGGTGAATGTAAGTGATTTAAGTAAAGATTATAAATTAGTTCTCACTAGATAAATCCGTAGTTGCTACAATATAGTTTCTAGTGAATTATGTTACTGTATTCATGTTGGGATGAACACCCCTGAAAGTTCATCCTAATAAGTTTCTTACTGCTCAGCTGAAAATGTGACAGCTAATTAACTGTACATAAATTTCAATCTATCAACCAAGAGCATGTTGAAACTCCAAATACTTTGCATGTTGAGAATTGTATGCCATTTGCATGTGCTTATTCTAATGTTACATTTTGTTGTTTTATGATATCATGTAACTGAATGGTGTTGGCTGTCGTTTGCTTCAGTGACAAGGGAATAGTATACTCAGCACGTGCTTATAAGATACCTGAATGCACAAGAGCTGCGACTGGAACTCCACTGGTACAGGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009577