BGIOSGA009583

From RiceWiki
Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009583| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009583, complete gene.| tag = OsI_140...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009583

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009583, complete gene.

LocusTag

OsI_14027

Ensembl Transcript ID

BGIOSGA009583-TA

Ensembl Protein ID

BGIOSGA009583-PA

Length

2588

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38343785..38346372

Sequence Coding Region

38346164..38346372,38346020..38346043,38345516..38345603,38345176..38345268,38344460..38344492
,38344318..38344413,38344204..38344260,38343785..38343895

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38343785..38346372 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38343785..38346372 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCGGGGGGAGCGGCGATCTCGGCGGGGCCCACGCCGCCGTCGGCGGCGGCGGCGTCGTCGTCGGTGGACTGGCACCTGCGGCCGCCGAACCCGAAGAACCCGGTGGTGTTCTTCGACGTGACCATCGGGTCCATCCCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGTCCCCAAGACGGCGGAGAACTTCCGGCAGTTCTGCACTGGAGAGCACAGGAAATCAGGTTTACCACAGGGATATAAGGGTTGTCAGTTCCATCGAGTGATCAAAGATTTCATGATTCAGGGAGGTGACTATATGAAGGGGGATGGTACTGGATGCACGTCAATCTATGGTACCAAATTTGATGATGAAAACTTCATTGCAAAGCATACTGGTCCTGGCCTACTTTCTATGGCAAATAGTGGGGTGAACTCTAATGGATCTCAGATTTTTTATCCAGCTGGTTTTGCAATCTTCGGGCTGGGGTACTGTTTTGGGATTGTATTTTGTTCTCTATACAAAATTAGCAATATCCAGTTCCAGTTCTTTATAACTTGTGCAAAATGTGAATGGCTGGACAACAAGCATGTGGTTTTTGGGAGGGTGCTAGGGGATGGTATGCTTGCTGTGCGGAAGATCGAGAATGTTGCAACTGGACCAAACAACCGACCGAAGCTCGCATGTGTCATAAGCGAGTGTGGTGAGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MASSGGAAISAGPTPPSAAAASSSVDWHLRPPNPKNPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMANSGVNSNGSQIFYPAGFAIFGLGYCFGIVFCSLYKISNIQFQFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGEM</aaseq>

Gene Sequence

<dnaseqindica>1..209#330..353#770..857#1105..1197#1881..1913#1960..2055#2113..2169#2478..2588#ATGGCGTCCTCGGGGGGAGCGGCGATCTCGGCGGGGCCCACGCCGCCGTCGGCGGCGGCGGCGTCGTCGTCGGTGGACTGGCACCTGCGGCCGCCGAACCCGAAGAACCCGGTGGTGTTCTTCGACGTGACCATCGGGTCCATCCCCGCCGGCCGCATCAAGATGGAGCTCTTCGCCGACATCGTCCCCAAGACGGCGGAGAACTTCCGGTACTGACCCAGAGCCCTCGCTCGCCTTAAACCCTAGGTTCCATCTGTTTAATCCTGCTTCTGATGTGTTTGCTTTTGATGGATCTCACTGATTTGTTTCATCTGTTTGTTTGGTTTCAGGCAGTTCTGCACTGGAGAGCACAGGTAGGGAGGCCCGGCGATTGGTTGATGGCTATGGCCAAGCATTTGTTGTTTATTCTTCAGCATTGACTGTCTTGACAGCTTTAAATGTTTAGCTTTGTTTGACTATGATATTGCCATAGAATTGCTTTATACTGTAGTAGTGGATCTTCGATGAAGATGGTGGGTAGCTAGGTTAGTATTGCTGATACTGGTCGAGTAGCTTTTGGGCACAACTAAATTCCATTCTAATTTGACATCTATTATACCTCCATTGTCTGCGATTGTTGTAATTGGCAGGAAACTGAGCTTGCATTTTTTTTCAGAACATTGATTACTTGATTATGTGATTTAGGCAAAAGTGCGCAAGCTTTCACCCACATATTGAATTACTATCACATCCATTGTTCAATCATAGAAGCTTCATCACTGGATTGCAGGAAATCAGGTTTACCACAGGGATATAAGGGTTGTCAGTTCCATCGAGTGATCAAAGATTTCATGATTCAGGGAGGTGACTATATGAAGGTTCGTGTGCTAAATTTGCTTCAAGTGTCAATCATGTCACCTAGCATAATAGCTTTAATCTGGTGTTTTCATAGGACTAACTAACTAATCCTGTGGATTTATAACAAAAGGCATCTACTATTGCACACTTTGATGTTATCTTTTATCAAGCATTGGGCAATGAACTGTTATTCAGCTATCTCCATACTTGGATTTGATTCATGTGATATTAAAAATAAATTAAAGCACTCTGTTTTGATGTCCTAAGGGGGATGGTACTGGATGCACGTCAATCTATGGTACCAAATTTGATGATGAAAACTTCATTGCAAAGCATACTGGTCCTGGCCTACTTTCTATGGTATTATTCCTCTCCACCTGATTTTCAATTGAAATACTGTTAGAAAATATTACCTCTCTAATGTAATCTTGTGCAGGACAACTATTTCTAGTGTTTGGTGGTTTAGCTATGTTTGCAGATAATTTCCTTGGACTCCTTGCTCTCTCTCTCTCTCTGTTACAAATTCTTAGTTTTCATCTGTTAATGCCTTCGGTGTGTGGCTTCTGGTCATTGGGTAAGCAGAGCCTCTTGTGCTCTGGAAACCTGCAGATAGTTGATACACAATTGTGCGTAAAATGAGGTATCTGAAGTTAACTATCTAAATGTGGCAAATTGTTTTTACACACAGTATTTCCAATCTACTCTTCCCAACGTTGAAATTTGCATAGGTTAGGTCATATTACATTTACATCAAATTAGAACAAGACATTGAAGCATCATCAAAGGTCATTGTGATTGGTGACTGACCCAATTGTATTGTTTACTTTTAGAACATTTGCCTGACCAAGTGACCAACCGCCTTATGCTGTTATTAATCTATATTTTTATCTGTTTCGGTGTAACTAGCTACTTCTACATCCATTTTGTTTTTTAGAACTTTTATGTGCATGTTTCCTGCACTGCAAGACAGTAATTTGATTTATTTTAGATGATATATTTGGTTTTATTTTCTAGATGTAAAAAACTGTCCTATCTTTTTTCAGGCAAATAGTGGGGTGAACTCTAATGGATCTCAGGTACTTCTTTTGATAACTGCTCTATTTTTTTTCTGTGTGGCTGTAGATTTTTTATCCAGCTGGTTTTGCAATCTTCGGGCTGGGGTACTGTTTTGGGATTGTATTTTGTTCTCTATACAAAATTAGCAATATCCAGTTCCAGGTTTCTTTTCAGTTACAGTATTCCTGAAAATATTATCTTCTATTCTTATGCTTGCAGTTCTTTATAACTTGTGCAAAATGTGAATGGCTGGACAACAAGCATGTGGTTTTTGGGGTAAGTTCCCTCATTTTGAATGCTTTGTGCTCTCGGAGCAACATTCCAACAGCATGTACTTGTCTACAGTATGTTTTTTTACTTACAGAGTAAATATATGCCTGGTAACATGAAAAAAGTTTAGTCGCTTTACTTTTGAGATTATGGAAAAACGGCTTGCCCCAGTAGAAAAAATGTGTTTGAATGGTTCTTAGCAGTCATGTGCTAGTCTCAGGCTAGGTGGTGTTTTTACCTATTACTACGTACCATGTTAACCTACCACCATTCTAATTGAAATAACTCTCTATTGTCATGTTAAATCATTTCAGAGGGTGCTAGGGGATGGTATGCTTGCTGTGCGGAAGATCGAGAATGTTGCAACTGGACCAAACAACCGACCGAAGCTCGCATGTGTCATAAGCGAGTGTGGTGAGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009583