BGIOSGA009585

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Revision as of 09:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009585| Description = BGIOSGA009585| Definition = Oryza sativa Indica Group BGIOSGA009585, complete gene.| tag = | tid = BGIOSGA009585-TA|...")
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Gene Name

BGIOSGA009585

Description

BGIOSGA009585

Definition

Oryza sativa Indica Group BGIOSGA009585, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA009585-TA

Ensembl Protein ID

BGIOSGA009585-PA

Length

2629

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38336058..38338686

Sequence Coding Region

38337720..38338686,38337325..38337626,38336058..38336228

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38336058..38338686 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38336058..38338686 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCCATCAACCCTGTCGCCGGCGAGGTCGCCGCGGCCACCGCCAAAGCTCCTCCGCCGGCAATGGCCACCGTCCGAGCTCCTCTGCCGGCAAACCACTACTTACCATACCACTCGGCGTCGGCGGCGGGCTCCTACGCTGCAAACACGCAATCGACGTCGTCGCCGGTAAGTCCGGCCTCGCCGGCGATGATCTCCTCCTCCTCCTCGTCCTTGCCGCCGCAGCAGCAGCGTACATGGCAACCGCAACCAACCACCTTCTCCCAAGCCAATCCAGGGCACGCCTACCAACAAGATCATCTTCCCGCCGTCGCCGGCCGCCGCTTCTTCCCGCCGCCGGCCATGCAAATGCAGTACTACCACCAGCAGCCGGCCGGCGTGGCCATGGTAGGAAGCGGCCATCCCATGGCGGCTCCCGTACACTCGTCGCCGCTCGCCACCACCTCTGGCAGCAACCATGCCGTTGTTCCAGACGCGCCGCCGCAAGAACCTGCCAAGCGACGACGCCGCAACACCGCCGCCGCCGCCACCGCTCGCTGGGGCCGCGGCCGACCCCGCGGCGCCACCGCATCCAGCGCGCATTCGGCGCCGCCGCCGCCTCCGCAGCAGCAGCCAACTACATCCGCTCCCGCCATTACAGCCCAGCGCAACGACGACGTCAACCAAGAAGATGACAACCAGAGCAGCAAGAACAGCGCGGAGGAAGCGGTGGTGNTCGCCGGTGGTGAGCCACCTGCAGCTACATCCACTCTCGCCATTGTTCCCCGACACGGTGATGTCGGCGATGCGGATCGGCCGGTGTCCCCGTACTCCGATATCCCCGGAGTGCGGTTCACGCCGACCGACCAAGAACTCATCATCCACTTCCTCAAACCAAAATACAACCTCCGCGACGCCATGCCGACCAACATCATCGTCATCAAGCAATTGGACGTCTGCAAGTTGAACCTAGACGAACTCCATGGAGATCTTGGCCTCGGGAAGAGCTTGGACGGGGCGTGGTACGTGTTTTCGCCGAGGAGCCGGTACAAGGAGCGCGGCGTCCGGCCGGCGAGGGGGATCAAGACGACGGCGGTGGGGTACTGGAAGTCTAACAGCGCGGAGGCCGACGTCGTCGACGACGACGGCGAGGTGATCGGCAGGGTGAACAGCCTCACGCTCGCGCTCGGCCATCAGCCGAGAGGGAAGGCGACGCACTGGAGGATGAAGGAGTATCGCATCCCGCAGTTTCAGATTCCACTTGGCCAAGAAGATTCAAACCGCCTGCTGGATGAATGGGTGCTCTGTAAATTGTACCATAGCTTTGCATACAAACAGAAGGGTAAATGCAAGGTTCATGAAGAGGGCAGCAAATCAGATAGAGGTGTACAAGACCTAAGTATAGATGATGACCGCAAAACATGTGACATTGAAGCCAACAAACCAAATGGAGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAINPVAGEVAAATAKAPPPAMATVRAPLPANHYLPYHSASAAGSYAANTQSTSSPVSPASPAMISSSSSSLPPQQQRTWQPQPTTFSQANPGHAYQQDHLPAVAGRRFFPPPAMQMQYYHQQPAGVAMVGSGHPMAAPVHSSPLATTSGSNHAVVPDAPPQEPAKRRRRNTAAAATARWGRGRPRGATASSAHSAPPPPPQQQPTTSAPAITAQRNDDVNQEDDNQSSKNSAEEAVVXAGGEPPAATSTLAIVPRHGDVGDADRPVSPYSDIPGVRFTPTDQELIIHFLKPKYNLRDAMPTNIIVIKQLDVCKLNLDELHGDLGLGKSLDGAWYVFSPRSRYKERGVRPARGIKTTAVGYWKSNSAEADVVDDDGEVIGRVNSLTLALGHQPRGKATHWRMKEYRIPQFQIPLGQEDSNRLLDEWVLCKLYHSFAYKQKGKCKVHEEGSKSDRGVQDLSIDDDRKTCDIEANKPNGV</aaseq>

Gene Sequence

<dnaseqindica>1..967#1061..1362#2459..2629#ATGGCAGCCATCAACCCTGTCGCCGGCGAGGTCGCCGCGGCCACCGCCAAAGCTCCTCCGCCGGCAATGGCCACCGTCCGAGCTCCTCTGCCGGCAAACCACTACTTACCATACCACTCGGCGTCGGCGGCGGGCTCCTACGCTGCAAACACGCAATCGACGTCGTCGCCGGTAAGTCCGGCCTCGCCGGCGATGATCTCCTCCTCCTCCTCGTCCTTGCCGCCGCAGCAGCAGCGTACATGGCAACCGCAACCAACCACCTTCTCCCAAGCCAATCCAGGGCACGCCTACCAACAAGATCATCTTCCCGCCGTCGCCGGCCGCCGCTTCTTCCCGCCGCCGGCCATGCAAATGCAGTACTACCACCAGCAGCCGGCCGGCGTGGCCATGGTAGGAAGCGGCCATCCCATGGCGGCTCCCGTACACTCGTCGCCGCTCGCCACCACCTCTGGCAGCAACCATGCCGTTGTTCCAGACGCGCCGCCGCAAGAACCTGCCAAGCGACGACGCCGCAACACCGCCGCCGCCGCCACCGCTCGCTGGGGCCGCGGCCGACCCCGCGGCGCCACCGCATCCAGCGCGCATTCGGCGCCGCCGCCGCCTCCGCAGCAGCAGCCAACTACATCCGCTCCCGCCATTACAGCCCAGCGCAACGACGACGTCAACCAAGAAGATGACAACCAGAGCAGCAAGAACAGCGCGGAGGAAGCGGTGGTGNTCGCCGGTGGTGAGCCACCTGCAGCTACATCCACTCTCGCCATTGTTCCCCGACACGGTGATGTCGGCGATGCGGATCGGCCGGTGTCCCCGTACTCCGATATCCCCGGAGTGCGGTTCACGCCGACCGACCAAGAACTCATCATCCACTTCCTCAAACCAAAATACAACCTCCGCGACGCCATGCCGACCAACATCATCGTCATCAAGCAATTGGACGTCTGCAAGTTGAACCTAGACGAACTCCATGGTCAGATGGATCGATCGATCCTATGATCACTCCATCGTAATGTTCTTGATGACGAACACGATTATAACTTCTTAGTTCTTGTTTTCTTTTCAGGAGATCTTGGCCTCGGGAAGAGCTTGGACGGGGCGTGGTACGTGTTTTCGCCGAGGAGCCGGTACAAGGAGCGCGGCGTCCGGCCGGCGAGGGGGATCAAGACGACGGCGGTGGGGTACTGGAAGTCTAACAGCGCGGAGGCCGACGTCGTCGACGACGACGGCGAGGTGATCGGCAGGGTGAACAGCCTCACGCTCGCGCTCGGCCATCAGCCGAGAGGGAAGGCGACGCACTGGAGGATGAAGGAGTATCGCATCCCGCAGTTTCAGATTCCACTTGGCCAAGAAGATTCAAACCGCCTGGTAAATTGGTGCACTTCCTTTAATTTATACTCCTTCCGCCCAAAAAAAAAGATAAATCCTGGGTTTCCGTGTTCAACATTTGACCGTCCGTCTTATATGAAACTTTTTTATAATTAGTATTTTCATTGTTGTTAGATGATAAAACATGATTAATATTTTATGCGTGACTTGTCTTTTTAATTCTTTTCATAATTTTTTCAAATAAGATGGACGGTCAAACGTTGGACACGGAAACCAAGGTTTGTCTTTTTTTTTGGGACGGAGGAAGTATGTCCATTCAAATTCAATGCACTAGCAGTTGTAAGCTTTAACTTGATACTCACTTCACCCTTCACCCTAAAATATAGAAATCTATAACTGTTTGGAACACATACTTAACACTGTAAATCGATCTGAACAAGTTGATAATGTCTTTCTATATTTTAGGACGAGGTAGTAGCATTTTGAAACATGCATAAAATGGATATTAACATCATATGATGTGACGATTGTTGGACCACATATCAATCCCATCTCGGTCGATATTATTGTAGTGTAGGTGTCAAAGTCGCTTAAAAATGCTATTGTATTTATGTTTCTTTTACTTGTTATTTCAGACAGTGATATAGTCTCTAGTATATATATCTCATAATTACTTTTTGTAATTATATATTTAGAAAACTCATAAAAATATAACCGTGTGGAAGCAATTTACCTGACAAATCTACTAATAATACCATTTTCATGTATTAAATCCCATTCCTTCTTAACGTATTATTAGTTATAACTTTTAGGTTTGATTGGACAGGTTTATAATGTCAGCCTTCTAAGAATGAAAGTAGTAAAACTAAAACTGAATTCTCGTGGAGGAACATACAAGAGAACTGCATATAGGTTTTTTTTTTCATGCAAATTCATATCAAAGGCTATATGAGAATTTGAGTTTGTTTAAAACGGGGCTAACATAGCATGCAAGCATCATCAGATTACCTCATCTTGCATTGTCTTGCAGCTTGTTTCCAGTGTGATAAGTTGATCTTGTTACATCTCTACATGCTCATCTTGTCAGCTTACACCCATGCTCTCTCAAGACATTGTTCTTTTTTACTTTCTGCAGCTGGATGAATGGGTGCTCTGTAAATTGTACCATAGCTTTGCATACAAACAGAAGGGTAAATGCAAGGTTCATGAAGAGGGCAGCAAATCAGATAGAGGTGTACAAGACCTAAGTATAGATGATGACCGCAAAACATGTGACATTGAAGCCAACAAACCAAATGGAGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009585