Os12g0230133

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0230133| Description = Hypothetical protein| Version = NM_001189922.1 GI:297728974 GeneID:9266778| Length = 3166 bp| Definition = Oryza sa...")
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Gene Name

Os12g0230133

Description

Hypothetical protein

Version

NM_001189922.1 GI:297728974 GeneID:9266778

Length

3166 bp

Definition

Oryza sativa Japonica Group Os12g0230133, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7102284..7105449

Sequence Coding Region

7102460..7103725

Expression

GEO Profiles:Os12g0230133

Genome Context

<gbrowseImage1> name=NC_008405:7102284..7105449 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7102284..7105449 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaatctccaaggaggacaaaaatgtttacagcaaggaaatagcaacactgttaatggttgaagaaaaagtttctgaggagttaactagtgaaactgagaatccatatgctgttagtgatttctcaaagctgtctccaactgctaacccagcttcacctcctgaatgtggccgttctgaatttgagcataacatgacttcgcttcataaccatgtaatggcgcacttatcattatgtagcttgaacatgaaggaggtcactacttctactgacagggaggttccatcagccattcttaattgtcctttgaagggtgttaacaaggatgctaacacggagttggtaatagaatggaggcttggaatgggcaatttccccttggtgctatcagagtgcggtgattcttcttgtgatagttctgtcagtgaacagtcatctgtgacgagcagcccatgtacatcattcacggctcattcagatacccggtctgaggatcttgatggagtagatatttgggtctcatctttagacctcgatgaagaagattcagacttgcttcaagagaaggaacaagatctgggatttttaagttgtgacttccccagcccttctttcagtgcagtgagaagaagcctccaatttggtccttccagttcgagtccagcgacgtcacatgggaaacaagccaatgactctgaagagcctatattttggccatttgaacacgcttcatattacagtcctgaatttgataaatttctgcttgtatcgccacgtagagttaccatggatgttgggtctgctgaatttcgccggttaaatccaattgtgcagaggctacataagaacaaattatcttcagcaaggaaaaacgtcggaccgcatcatggaagtgtcagtttgggtgcaaaaggaaccaaaacatcccaagataaggttcagaatgccgctgcagttccctcctggttgagcagaacaacaaaaacatcagcaaaaacatcctcttctaagcaccagcaactgagcaacagtgagaaaagaaagccgtctcacttgaaaatctctcctccaagaaaggataggtttccacagttgcagtcaggccacaccgttcaagagcttgaagcaagtgatcaccgaaagctagctgttgagaagattctgatcgagcagttcatcggcttagatgagtttgatggccatgaaggtatcagttcagattcatctgacaaccaacttagcctcttcctatctccaagatag</cdnaseq>

Protein Sequence

<aaseq>MEISKEDKNVYSKEIATLLMVEEKVSEELTSETENPYAVSDFSK LSPTANPASPPECGRSEFEHNMTSLHNHVMAHLSLCSLNMKEVTTSTDREVPSAILNC PLKGVNKDANTELVIEWRLGMGNFPLVLSECGDSSCDSSVSEQSSVTSSPCTSFTAHS DTRSEDLDGVDIWVSSLDLDEEDSDLLQEKEQDLGFLSCDFPSPSFSAVRRSLQFGPS SSSPATSHGKQANDSEEPIFWPFEHASYYSPEFDKFLLVSPRRVTMDVGSAEFRRLNP IVQRLHKNKLSSARKNVGPHHGSVSLGAKGTKTSQDKVQNAAAVPSWLSRTTKTSAKT SSSKHQQLSNSEKRKPSHLKISPPRKDRFPQLQSGHTVQELEASDHRKLAVEKILIEQ FIGLDEFDGHEGISSDSSDNQLSLFLSPR</aaseq>

Gene Sequence

<dnaseqindica>1725..2990#aggagagatggcaaatggagggaagcaggagagcagagcagccgccaggaaagcaggtggccgcttctccaagaacgagccccagattcaggtgatgatccttcccgtatcctttttggcttgatcattttttttctctgcatttgtttgtgagatttcacccccgctttagtttagtttcttggagcgttttcattggggattttggttcttccccttgaccgtttcttgattcagatggtgtgttgttcttgaggtagagtaggtgcatgtctgagttcttgaaaatcgaatcctctctcaacatttgcagctgctggttatagattgccccctttctttcatttgtttcgaaaaatctgtgttttttttattttaaaaaaattgattggtactaatggaagatgcggctataggttagtagttgtgaagactgagagaagcatatctgatttatttgtgctgaagagtttagctgcaatgcagtaatttgtgcttgacctaaaattttaggcgattttttggatggcaaaaaaattgcttcagtgccgtttactctataaattgctttctaaggtaagagtgaatgtgaaattggtagtttggagatcttctgaatccattgaatataaaatgttcaatgactgcaccttatattgtgaacaatgtctgtactagttagtttagttactaatataatcacaatctgcatgaattgtgtttttgtcagaaaatttgttgtgcagagagcatggagtcaacaattacatttatataacaagcagagaaaatttctgttgcatgtcactatctcaccttgagtgctttgaccttttctgaatacacatggatagactattatcatgtgagattagtttgcttgaaatattttgtcaagtgatgacacaatcatatgactatttcattgaccggatcctcaggttgaattgaatcaagtgtaccactagaattcgtttgccacagctgaagctaactaataaaaaattcgttaggattgtcttgttgcgatattggcgcatttgtacatgtccatggaaatgtatgaaacaacactgtacaccttttttttttcctcgtttacattaggtagtaggtaaggtacttctcttcataaagcgaatgtgtagataaaccaagtcaaaacttgttggcacagtgggtgacatgaagatgatgatattctaggtaatgaagtaggtaatagatccttttaaatttacagcatctctcttttgaagaacaatcaagcaattggacttcatctaggatagtcttctggaatatttaagtattatatgtacataatttccataattatgtacactatatgtggaaatatagtgtacataattatggaaaatattgattactcaatttgagtcacttatttatcatatcaaatatacttatttgtttacatcccatccacttcatttgccactatcacttgcttgtgtaacagtgatgtttcaatggtgatggactgattgctgcttcttccatatattttagatatgattgagaaatcatatgtagttgtcataaatattctatctagtttctctacacataatctatcttgttttctatctatttgtagaaaactcaatttgtcattatcttgggtgattgcctgaaacaattttcttatttctccaagttccaggtaaaattgagttgaagtttgcacaagatatattgctatggaaatctccaaggaggacaaaaatgtttacagcaaggaaatagcaacactgttaatggttgaagaaaaagtttctgaggagttaactagtgaaactgagaatccatatgctgttagtgatttctcaaagctgtctccaactgctaacccagcttcacctcctgaatgtggccgttctgaatttgagcataacatgacttcgcttcataaccatgtaatggcgcacttatcattatgtagcttgaacatgaaggaggtcactacttctactgacagggaggttccatcagccattcttaattgtcctttgaagggtgttaacaaggatgctaacacggagttggtaatagaatggaggcttggaatgggcaatttccccttggtgctatcagagtgcggtgattcttcttgtgatagttctgtcagtgaacagtcatctgtgacgagcagcccatgtacatcattcacggctcattcagatacccggtctgaggatcttgatggagtagatatttgggtctcatctttagacctcgatgaagaagattcagacttgcttcaagagaaggaacaagatctgggatttttaagttgtgacttccccagcccttctttcagtgcagtgagaagaagcctccaatttggtccttccagttcgagtccagcgacgtcacatgggaaacaagccaatgactctgaagagcctatattttggccatttgaacacgcttcatattacagtcctgaatttgataaatttctgcttgtatcgccacgtagagttaccatggatgttgggtctgctgaatttcgccggttaaatccaattgtgcagaggctacataagaacaaattatcttcagcaaggaaaaacgtcggaccgcatcatggaagtgtcagtttgggtgcaaaaggaaccaaaacatcccaagataaggttcagaatgccgctgcagttccctcctggttgagcagaacaacaaaaacatcagcaaaaacatcctcttctaagcaccagcaactgagcaacagtgagaaaagaaagccgtctcacttgaaaatctctcctccaagaaaggataggtttccacagttgcagtcaggccacaccgttcaagagcttgaagcaagtgatcaccgaaagctagctgttgagaagattctgatcgagcagttcatcggcttagatgagtttgatggccatgaaggtatcagttcagattcatctgacaaccaacttagcctcttcctatctccaagatagccggtcagcatctacaatcagcgcattatacgcatgcaaaacatctacagtaaatcatgtgcatatcttcatgtaccattatcattagcatctacttgttgtacattatactggtaccttcagagtgacattgctaggaggttttttggtgcaaaggctgattaaatttcagtacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0230133, RefSeq:Os12g0230133