BGIOSGA009594

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Revision as of 09:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009594| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009594, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009594

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009594, complete gene.

LocusTag

OSJNBA0028F23.18

Ensembl Transcript ID

BGIOSGA009594-TA

Ensembl Protein ID

BGIOSGA009594-PA

Length

4632

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38205041..38209672

Sequence Coding Region

38208764..38209672,38208614..38208668,38208397..38208520,38208192..38208324,38208044..38208115
,38207905..38207961,38207431..38207555,38206396..38207002,38206035..38206152
,38205899..38205948,38205497..38205637,38205041..38205304

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38205041..38209672 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38205041..38209672 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGGAAAAGCAGTACAGTACAGTAGGAGCGCGAAACCGAGGGGAAAACTCGAAACGTCTCCCGCGCTGCTGCTCTTGGATTTCATCCTCATCTTCTTCATCTCCTTCCTTCCTCTTCCCCCATCGCGCGCTCTCGAATCCGGTGTTCCGCTCTCCGCTCCTCGGCTCGCGGCGTCTCGATTCGGAGTTTGGTGGAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCCTAGGCGGCGGCGGCGGCGGCGGCGACGACGTCATGGAGACGGAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGTCGTCCCAGATCGCCATCGCCGCCCACCCCGTCGTCGGATCCCCACCTCCACCCTCTCCGCCGCCGCCGCCGCCGTTGGACGAGGAAACCCTAGCTCAGTTCCCTTCCCCGCCCACTAACCCCTCCCCACCTCGGCCGCCGCCGCTGGATGCGGATGCGGATGCGGCTGCGGAAGCTGCTCCCTCCCCTGCACTGACCTCTCCTCCTCCCAACCCGAGCTCCTCGCCGCTGCCACCGACAGATACCACCGAGGAGGAGGAGGAGGAGGAGGAGGATGACGGGCTGGACCCGCTGTTCTCGGAGACCTTCGGCGCCGTGGGGTGGGACCCGCTGGGGATGCCGAGGATGGAAGGGGAGGGCGACGAGGAGGAGATGCTGGGTGGAGGGCTCATCGAGGAGCTGCGCAGGGAGAAGTCGGCGAAGAAGCGGCTCGACATGGACGAGGGCGAAGAAGGCGGCGGCGAAATCGCCATGGATGCCGAGGTCAAGGGGAAGCGGAGCAAGAGGAGGAAGAAGGATGAGGCGCCCAAGGACTCGGCCCGAGGGAAGAAACGCTCGGAGAAGGAGAGGAGGGTGCAGCTTGATTCGATCCACGCCGAGTCGCAGAGGCTGCTGCGAGAGACGAGGAGCGTATCATTTAAGCCGAGTGCGCAGCCAGTGTACAAGCCCATCTCATCAGTCCTGGAGAAGATCCGCCTTCGGAAACTAGAGATTCTAAAGAAGTCGGTTTCCCTGTTGTTTTTCTCAGCTACTCCTAATGATGATGAGGACGAAGAAGAAGATGATGTCTCTTCAGATCCTGTGAGTGGTACCGCTGGCGATTTAGGTGCACCTCAGGTTAAGGAGGTGGATGCAGAAGGCAAAGATCCGAAGATTGACGATATTGAGAATGAGGGTGGAATGAATAGCGGTGACGTGAACCAGTGTGACAGTGTACCTGAGAACAAGGATGCTTTGAATTGTGATAAGGATCTTGATAATTGTGGTAGCAAAGATCTAGATAAGGAACTCTTGGAAAATTCTCAAGATAATCTTGAGGACAAGGCCCAATCAAGTGACAATCCCAATAATGCTGCAGATGAAATTCAATCACCCCCCTCTTCAAGCCCTACTGAGAGTACCGATGACATTTCATCAGAAGATGAAGAATACAATGATAAGGAGAACATTGCTCCTAGCACTCCGAAAGATGATGTGAATGTTCATGAACCACTCCAAAGAGCTTTAGCAGGGGATTCATGCCCAGATGATGCTATCTTGAAAGATTTTCTGGATGTTGAAGCTGAGGAAGAGGATGACAGTGACGATGACATGATGAGGTTTAAGGACAATGAAGAAGATGATGGAAGTGATGAAAATGAAGTATTCAATGATCTTATAGAAGCTGGGTATGAAGAAGGAGAAATAGATCATGAGAAACGCAATGCGCTCCACCAAAAGTGGCTTCAGCAGCAAGATGCTGCTGAAACAAATAAATTTATGCAGAAGCTGAAATTTGGTCACCAGGAGCAAAAAAAAGTAATGGATCAAGATGAGGATGATGCTGAAGACTGTGAAGATGAATCAGAAAATGAAATGTCATATGATTTGACTCCAACTAATGTCGTGCGCCAGAATTCTGAAAAAGCAAAACAAATGATTGCGAGAATGTTCACAGATGATAATGATACTTATGAGCACTCTGATGATGAGGAAATAGAAGAACATTTGGCTCGCCAACGTATCTCAAAGCGAGAAGTTCATAATAGTTCATTCATATCTCCACTGGAGAATGACAGCTCAAGGGAAGTATTTAGTCTGATAAAGAAGCTCAATATTGCTCCTCAACCCAAGAGGAGGGGAAAGCAAGTCACATCAAATCATGAATTGCTTACGGTTGGGAGAGACAACAGCGCTTCTTCAAAGTCATCTTTTCTCGGTCGAACAGCCAGTGGTTCATTGGCATCTTCCCACAGATCGGCCTATAGAACCTATGTATTTGGTCGTGACGACAGCAATAGTAGCAACAAGAGTTGCTTGTCTACTTCCGAGAGTAATGCAGATACGGATCAGACGAATTCCAGCCAACCAAAGAAAGCAAAGTTCAGTAGTTCACAGTCAAAACAAGCGGCAACAAAAACAAATTCCAAGGGAGATAACAGTTCAGGTGTTTCTCTGATTGAGGTCCTGCGCAGATCATCCTCTACTTCAGACAAACAAGAGTATACTCGTCAGGAAAGCTGCGCTGTTATCACAGAAAGCCAGGCTGCGCACCAGTTCTCGGCATTCAAATTATCAAGGAGGTTTTCCAGGGTGGGAGCAAGAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MVGKAVQYSRSAKPRGKLETSPALLLLDFILIFFISFLPLPPSRALESGVPLSAPRLAASRFGVWWKGERERERERERERTLGGGGGGGDDVMETEPXXXXXXXXXXXXXXXXXKSSQIAIAAHPVVGSPPPPSPPPPPPLDEETLAQFPSPPTNPSPPRPPPLDADADAAAEAAPSPALTSPPPNPSSSPLPPTDTTEEEEEEEEDDGLDPLFSETFGAVGWDPLGMPRMEGEGDEEEMLGGGLIEELRREKSAKKRLDMDEGEEGGGEIAMDAEVKGKRSKRRKKDEAPKDSARGKKRSEKERRVQLDSIHAESQRLLRETRSVSFKPSAQPVYKPISSVLEKIRLRKLEILKKSVSLLFFSATPNDDEDEEEDDVSSDPVSGTAGDLGAPQVKEVDAEGKDPKIDDIENEGGMNSGDVNQCDSVPENKDALNCDKDLDNCGSKDLDKELLENSQDNLEDKAQSSDNPNNAADEIQSPPSSSPTESTDDISSEDEEYNDKENIAPSTPKDDVNVHEPLQRALAGDSCPDDAILKDFLDVEAEEEDDSDDDMMRFKDNEEDDGSDENEVFNDLIEAGYEEGEIDHEKRNALHQKWLQQQDAAETNKFMQKLKFGHQEQKKVMDQDEDDAEDCEDESENEMSYDLTPTNVVRQNSEKAKQMIARMFTDDNDTYEHSDDEEIEEHLARQRISKREVHNSSFISPLENDSSREVFSLIKKLNIAPQPKRRGKQVTSNHELLTVGRDNSASSKSSFLGRTASGSLASSHRSAYRTYVFGRDDSNSSNKSCLSTSESNADTDQTNSSQPKKAKFSSSQSKQAATKTNSKGDNSSGVSLIEVLRRSSSTSDKQEYTRQESCAVITESQAAHQFSAFKLSRRFSRVGARN</aaseq>

Gene Sequence

<dnaseqindica>1..909#1005..1059#1153..1276#1349..1481#1558..1629#1712..1768#2118..2242#2671..3277#3521..3638#3725..3774#4036..4176#4369..4632#ATGGTGGGAAAAGCAGTACAGTACAGTAGGAGCGCGAAACCGAGGGGAAAACTCGAAACGTCTCCCGCGCTGCTGCTCTTGGATTTCATCCTCATCTTCTTCATCTCCTTCCTTCCTCTTCCCCCATCGCGCGCTCTCGAATCCGGTGTTCCGCTCTCCGCTCCTCGGCTCGCGGCGTCTCGATTCGGAGTTTGGTGGAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCCTAGGCGGCGGCGGCGGCGGCGGCGACGACGTCATGGAGACGGAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGTCGTCCCAGATCGCCATCGCCGCCCACCCCGTCGTCGGATCCCCACCTCCACCCTCTCCGCCGCCGCCGCCGCCGTTGGACGAGGAAACCCTAGCTCAGTTCCCTTCCCCGCCCACTAACCCCTCCCCACCTCGGCCGCCGCCGCTGGATGCGGATGCGGATGCGGCTGCGGAAGCTGCTCCCTCCCCTGCACTGACCTCTCCTCCTCCCAACCCGAGCTCCTCGCCGCTGCCACCGACAGATACCACCGAGGAGGAGGAGGAGGAGGAGGAGGATGACGGGCTGGACCCGCTGTTCTCGGAGACCTTCGGCGCCGTGGGGTGGGACCCGCTGGGGATGCCGAGGATGGAAGGGGAGGGCGACGAGGAGGAGATGCTGGGTGGAGGGCTCATCGAGGAGCTGCGCAGGGAGAAGTCGGCGAAGAAGCGGCTCGACATGGACGAGGGCGAAGAAGGCGGCGGCGAAATCGCCATGGATGCCGAGGTCAAGGGGAAGCGGAGCAAGAGGAGGAAGAAGGATGAGGCGCCCAAGGACTCGGCCCGAGGGAAGAAACGCTCGGAGAAGGTAATATAAGTCTTTCTTGTGTTTGGTTTCATATGTTTTTTCTGTTGAATTGACTGTACATTTTGCTGACGGTTGGTGTGGGTTGATCCGTGCAGGAGAGGAGGGTGCAGCTTGATTCGATCCACGCCGAGTCGCAGAGGCTGCTGCGAGGTATACACTTTGAGTCCGTTTGCTTGGTTGGAATTGGGATGCATGGGATTTTCTGTTCATCTAAATGTTTCTTATTGCTTTCCTTATCTGCAGAGACGAGGAGCGTATCATTTAAGCCGAGTGCGCAGCCAGTGTACAAGCCCATCTCATCAGTCCTGGAGAAGATCCGCCTTCGGAAACTAGAGATTCTAAAGAAGTCGGTTTCCCTGTTGTTTTTGTGAGGTTACACTGAGAATTTCATCTGCAAATATTTGTTAACTGACGCTATTTTCTTCACTATGTTTTTCAGCTCAGCTACTCCTAATGATGATGAGGACGAAGAAGAAGATGATGTCTCTTCAGATCCTGTGAGTGGTACCGCTGGCGATTTAGGTGCACCTCAGGTTAAGGAGGTGGATGCAGAAGGCAAAGATCCGAAGATTGTGAGTCTTTATTGTAGTATCTTTGTTCATGGGTGTCATAGCACTTGTGAAACTAAAATCTGTCTTCTGATTGTAGGACGATATTGAGAATGAGGGTGGAATGAATAGCGGTGACGTGAACCAGTGTGACAGTGTACCTGAGAACAAGGTGAGCATTGCTTTCAACCTTTTCACTTGATTTACATGCAGATGCTGTTTTGTGCTGTAATGATACTGTTGCTTGTTTGCAGGATGCTTTGAATTGTGATAAGGATCTTGATAATTGTGGTAGCAAAGATCTAGATAAGGTCTGTGCCCTTCCAAATTCTGTAGTCAATTTGTCATTTGTAGCAGAATTTCTGTAATAGTCTAATTGGGTGATGCTTTATTCATAACCAGTGGTTGCTTCTACTTTGTTCTGCTAATATAAAAACAAGTTAATTTTCAACTTAAGCATAATCATGAATGCTAGTAAAGGTAGTGGGTCATTTGCCCATATTAGGAAGTTTACGTACAGCTGATGACATGGTTGGCATTTCTCGTTGTATAGAAAACATTAAATGGGTTTCTACTTTCTATGGTTATAAAATTTAAAATCTCATTCATATTTGTGTGCAAGGTTTGGCCTGTTAACTATTGAATGCTTGATGCTACCAGGAACTCTTGGAAAATTCTCAAGATAATCTTGAGGACAAGGCCCAATCAAGTGACAATCCCAATAATGCTGCAGATGAAATTCAATCACCCCCCTCTTCAAGCCCTACTGAGAGTACCGATGACATGTAAGTACAGCAGTCTCATAAATTTTCCATCTCTTACCATTTACCTGACCTATTTTATCCCTTTAAACAATATTCTATCTGTACCAAATTTATAGCTATTGCACATATAACATACAGACAAATGTAGAAATCTTATGGCATTTATGGTGTAAATTAAAACTTGTCATGGCTGCGCCAACAGTACATATTCATTTTTCTTTAGCCTCACCATCATTAAACTGCCTATATAGCGCAAATGCAAATTTATTTGAGATCACTCTACCATGAAGGTGCCATTATTTCTTATTATTGTTTTACTGACAACACATTACCCAATTTTCTGGAGTAAGTATTGGTCCTTCACATCTGTGTTCTGTGAGATTTGGCAGTTCTTTCCCCCCTTGCTTATGTTGATGTTCTGTAACTTAAAATTGTGTTATTTGACCCAGTTCATCAGAAGATGAAGAATACAATGATAAGGAGAACATTGCTCCTAGCACTCCGAAAGATGATGTGAATGTTCATGAACCACTCCAAAGAGCTTTAGCAGGGGATTCATGCCCAGATGATGCTATCTTGAAAGATTTTCTGGATGTTGAAGCTGAGGAAGAGGATGACAGTGACGATGACATGATGAGGTTTAAGGACAATGAAGAAGATGATGGAAGTGATGAAAATGAAGTATTCAATGATCTTATAGAAGCTGGGTATGAAGAAGGAGAAATAGATCATGAGAAACGCAATGCGCTCCACCAAAAGTGGCTTCAGCAGCAAGATGCTGCTGAAACAAATAAATTTATGCAGAAGCTGAAATTTGGTCACCAGGAGCAAAAAAAAGTAATGGATCAAGATGAGGATGATGCTGAAGACTGTGAAGATGAATCAGAAAATGAAATGTCATATGATTTGACTCCAACTAATGTCGTGCGCCAGAATTCTGAAAAAGCAAAACAAATGATTGCGAGAATGTTCACAGATGATAATGATACTTATGAGCACTCTGATGATGAGGAAATAGAAGAACATTTGGCTCGCCAACGTATCTCAAAGCGAGAAGTAAGTGCTAACTTGTTCAGATAATCACCAACTATTACACATTACTATATTTACTTTCAGGGGCACAATATGTACCTGTTTTAGGATGTCTCATGTTTGATTGTCTGGCATGGTTTATATAGCACTGAAATTGAAAATTATTGATGATATTTGTAGTCCTTGCTATGCTAGTGTAGAATTAGCTTTTCACCTTCTATGCTTTACCAAAGTAATTTAAGAATGTTGCACCATATCTTCTTGCAGGTTCATAATAGTTCATTCATATCTCCACTGGAGAATGACAGCTCAAGGGAAGTATTTAGTCTGATAAAGAAGCTCAATATTGCTCCTCAACCCAAGAGGAGGGGAAAGCAAGTCACATGTAAGGGTGTTTTCTTCTGAATCCATGCCTACCTTTATTGAGACCTTTTTTCTTGATTACAATCTTTTGTTTCAATATTTCTTCAGCAAATCATGAATTGCTTACGGTTGGGAGAGACAACAGCGCTTCTTCAAAGGTGCATTATTGATTCCCGTTTGCTATTCTACTTCTTACACATGAATGCACCTGCTGAAAGTTTTTAAAGTGTCGTGCTGCTTCACATGGCAAAATTGCAAAATACTGAATACCTGAGTAACTTACATGTCATCACTAGTCATTAGTCACTACTGTATAAACGAGCTCTTATACCTTTTCTGTTGCCATTGCTCTGGTATTTCGGACAAACAGTTTTTCTTGTGTTTGCTCATGAAATGACGTTATTGTATGTTCCTTTCAGTCATCTTTTCTCGGTCGAACAGCCAGTGGTTCATTGGCATCTTCCCACAGATCGGCCTATAGAACCTATGTATTTGGTCGTGACGACAGCAATAGTAGCAACAAGAGTTGCTTGTCTACTTCCGAGAGTAATGCAGATACGGTAAGTTTGAAGGGCAAGGTGACCGTACATCCACATGCTCTGAGACATTCTTTTCGCTGGGCCGGCGAAAGCCGGCCGGGGTATATATTAAGAAAGAGAGAGTTTAAGCAAACTGTACATACAAGAAAACATGCTCTGAGACATTCATTTCTTATCTTAGCATTCTCATGTGCTTTTGCATTCATTTTGCAGGATCAGACGAATTCCAGCCAACCAAAGAAAGCAAAGTTCAGTAGTTCACAGTCAAAACAAGCGGCAACAAAAACAAATTCCAAGGGAGATAACAGTTCAGGTGTTTCTCTGATTGAGGTCCTGCGCAGATCATCCTCTACTTCAGACAAACAAGAGTATACTCGTCAGGAAAGCTGCGCTGTTATCACAGAAAGCCAGGCTGCGCACCAGTTCTCGGCATTCAAATTATCAAGGAGGTTTTCCAGGGTGGGAGCAAGAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009594

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009594&oldid=54417"