Os12g0230200

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0230200| Description = Similar to Calcium-dependent protein kinase| Version = NM_001072975.1 GI:115487911 GeneID:4351829| Length = 3877 bp|...")
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Gene Name

Os12g0230200

Description

Similar to Calcium-dependent protein kinase

Version

NM_001072975.1 GI:115487911 GeneID:4351829

Length

3877 bp

Definition

Oryza sativa Japonica Group Os12g0230200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7111339..7115215

Sequence Coding Region

7111593..7112183,7113065..7113188,7113283..7113426,7113516..7113668,7113754..7113869
,7113953..7114120,7114284..7114505,7114603..7114776

Expression

GEO Profiles:Os12g0230200

Genome Context

<gbrowseImage1> name=NC_008405:7111339..7115215 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7111339..7115215 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgctgcgtgtcccggccgtccggcgccgacaagcggcggcgctgcggcagctccaccgccccgcacacccgcggcggcaggcgggtgatcggcgccgccaacatgcggtgcctctccacggtctcctccgtgtcggacgcggcgcgcgccgtgatgtcgaacgagccggcgaccgtgctgggcaacagcggcagcagcggcaacggcggcgtgatggcggcggaggagatgctgcggcggtacgagatcggggaggagctgggtcggggggagttcggggtgacgcggcggtgccgggacgcggtgacgggggagcggctggcgtgcaagtcgatcagcaagcggaagctccggagcagcgtggacgtggaggacgtgcggcgggaggtggccatcatgcggtcgctgccggcgcacgccaacgtggtgaggctccgggaggcgttcgaggacgccgacgccgtccacctcgtcatggaggtctgcgagggcggcgagctcttcgaccgcatcgtcgcccgcggccactacaccgagcgcgccgccgccgccgtcatgcgcaccatcatggacgtcgtccagcactgtcacaagaacggcgtcatgcatcgggacctcaaacctgagaactttctgtatgccaatgcatctgagaactcccctctcaaggtcatcgacttcggcctctcagtgtgcttcaaacctggtgcaagattcaatgagattgttggatctccctactacatggcaccagaagtcctgaagagaaactatggacaagaaatagacatatggagtgcaggagtcatactgtacatcttgctatgtggtgttcctcctttctgggccgagaccgacgaagggatcgcacaggccatcatccggtcacatatcgacttccaaagagagccttggccaaaggtgtcagataatgccaaggatcttgtaaggaggatgcttgatccaaacccatatactcggttgacggctcaacaggttctagagcatccttggatacagaatgcaagtgcagctcccaacattcctctgggagaagcagtcaggtccaggctgaagcaattcactgttatgaacaagttcaagaagaaggccttacttgtggtggcggagtacttaccaaccgaagagctggatgcaatcagggagctgttcaatatgttggacaccaaaaagaaggggcacttgacactagaagagctcagaaagggactgcaagtgatagggcacaacatccatgacacagatgtcgatatgctcatggaagctgcagacatagatggaaatggcatactggattgcaaggagtttgtgacagtatccattcacctgaagaaaatccgtagcgatgagcaccttccgaaggtgttcagcttcttcgacaagaacggcagcgggtacatagagatcgaagagttgaaagaagccctctccccaagaggtgaccagaagtcgatcgacgacatatttctggatgttgacatagacaaggatgggaagataagctacgaggagtttgagttaatgatgtcagccggaatggactggaggaatgcatcccggcaatactcgagagcagtttacaacactctcagccgcaagatattcaaggaagtgtccctgaagcttgatcacagtggtccacttgttgcagcaggaaaatag</cdnaseq>

Protein Sequence

<aaseq>MGNCCVSRPSGADKRRRCGSSTAPHTRGGRRVIGAANMRCLSTV SSVSDAARAVMSNEPATVLGNSGSSGNGGVMAAEEMLRRYEIGEELGRGEFGVTRRCR DAVTGERLACKSISKRKLRSSVDVEDVRREVAIMRSLPAHANVVRLREAFEDADAVHL VMEVCEGGELFDRIVARGHYTERAAAAVMRTIMDVVQHCHKNGVMHRDLKPENFLYAN ASENSPLKVIDFGLSVCFKPGARFNEIVGSPYYMAPEVLKRNYGQEIDIWSAGVILYI LLCGVPPFWAETDEGIAQAIIRSHIDFQREPWPKVSDNAKDLVRRMLDPNPYTRLTAQ QVLEHPWIQNASAAPNIPLGEAVRSRLKQFTVMNKFKKKALLVVAEYLPTEELDAIRE LFNMLDTKKKGHLTLEELRKGLQVIGHNIHDTDVDMLMEAADIDGNGILDCKEFVTVS IHLKKIRSDEHLPKVFSFFDKNGSGYIEIEELKEALSPRGDQKSIDDIFLDVDIDKDG KISYEEFELMMSAGMDWRNASRQYSRAVYNTLSRKIFKEVSLKLDHSGPLVAAGK</aaseq>

Gene Sequence

<dnaseqindica>255..845#1727..1850#1945..2088#2178..2330#2416..2531#2615..2782#2946..3167#3265..3438#tttccttccatctctctctctcctcctcctctcttgccctagagagagagagagagagggagggggccgcaagagagagagagatcgatcaccggccgccctccggagctcgcgcgctcgttcgttcgttcgttcgatcattcgtacgtccacaacaattccggcgacgcgaccgtcgccgtacgtttgcggtggcgcggcagcgtcgtcggcggtgaagaagaagaagaagaagatcgaagaagaggaagaggatgggcaactgctgcgtgtcccggccgtccggcgccgacaagcggcggcgctgcggcagctccaccgccccgcacacccgcggcggcaggcgggtgatcggcgccgccaacatgcggtgcctctccacggtctcctccgtgtcggacgcggcgcgcgccgtgatgtcgaacgagccggcgaccgtgctgggcaacagcggcagcagcggcaacggcggcgtgatggcggcggaggagatgctgcggcggtacgagatcggggaggagctgggtcggggggagttcggggtgacgcggcggtgccgggacgcggtgacgggggagcggctggcgtgcaagtcgatcagcaagcggaagctccggagcagcgtggacgtggaggacgtgcggcgggaggtggccatcatgcggtcgctgccggcgcacgccaacgtggtgaggctccgggaggcgttcgaggacgccgacgccgtccacctcgtcatggaggtctgcgagggcggcgagctcttcgaccgcatcgtcgcccgcggccactacaccgagcgcgccgccgccgccgtcatgcgcaccatcatggacgtcgtccaggtctctctctctctctcttcaattcatccatctccattcttattgcatgcatttgatctgcaatcaaagattcaaagctgttcaatttcagataaagaatgaacattttgatctgatagaattaattacgagcagttcgttctggttcctaatgtataaaagactacgtacagaacagaatttacaatgcacttcacattgtacaatccaaagtttgaataaaacttacatgcatcattggagtggtttttgctggcccaaattaagttcaattgtagtagtacacacggaaagcttgtaaagtatcagcgtgcaccacccacatgctcatgctttgagcatgcctgatttaaggttaaaaattttcggagtctgcagtaacatgtaaaatatgtcaaagtacattatactccctccgttcctaaatatttgacgccgttgacttttttaaacatgtttgaccgttcgtcttattcaaaaaatttaactaattattaattattttcctatcatttgattcattgttaaatatatgtttatttatacatatagttttacatatttcacaaaagtttttaaataagataaatggtcaaacatgttttaaaaagtcaacgacgtcaaatatttagggtcagagggagtacatggttatggcatgcaaatgtgaaatgtgcaaataagccaatccttctaacttaacaccaaaatatttgtgctcaatttgcttccagtagcctttcaagaaatagtgtccattgaaacatgaaactgataaccaacaattaatatttactgcaaagtaaacaaatacctctttgaattgattgctcaatgtagagagtgaaaaatatttgatacattagtacaactttttgcagcactgtcacaagaacggcgtcatgcatcgggacctcaaacctgagaactttctgtatgccaatgcatctgagaactcccctctcaaggtcatcgacttcggcctctcagtgtgcttcaaacctggtacaaaatatagctatttcatatagttcaatccacatataccatatatcaacaaatatttaagtatcgatcatgcacgattcttccccattaggtgcaagattcaatgagattgttggatctccctactacatggcaccagaagtcctgaagagaaactatggacaagaaatagacatatggagtgcaggagtcatactgtacatcttgctatgtggtgttcctcctttctgggccggtaagtctcagtttagatatgcatggaagtgcaagattttgttgaattaattttaccaataaaacaagttcttggatgaacttttgtagagaccgacgaagggatcgcacaggccatcatccggtcacatatcgacttccaaagagagccttggccaaaggtgtcagataatgccaaggatcttgtaaggaggatgcttgatccaaacccatatactcggttgacggctcaacaggttctaggtaatttagtcctaccatttttttgcctcctctaatacatggctggcctgattctaacaatcatttctggacttcgagaatgaagagcatccttggatacagaatgcaagtgcagctcccaacattcctctgggagaagcagtcaggtccaggctgaagcaattcactgttatgaacaagttcaagaagaaggccttacttgtaagctggcagttttgtttcattagtgttattcctagatattagtgtaactaagtattgatactgaacttattgttggtaaggtggtggcggagtacttaccaaccgaagagctggatgcaatcagggagctgttcaatatgttggacaccaaaaagaaggggcacttgacactagaagagctcagaaagggactgcaagtgatagggcacaacatccatgacacagatgtcgatatgctcatggaagctgtgagttcctcttcacttacactattctggttccacaatctcagcttttcactacttgcaagatgaactcattttcaatcccatcggactattaaattgttcttaaccagcagatgattcacagattatatgagatccccctgcctgtgttcttattctacaggcagacatagatggaaatggcatactggattgcaaggagtttgtgacagtatccattcacctgaagaaaatccgtagcgatgagcaccttccgaaggtgttcagcttcttcgacaagaacggcagcgggtacatagagatcgaagagttgaaagaagccctctccccaagaggtgaccagaagtcgatcgacgacatatttctggatgttgacatagacaaggttaggtcactttcgttaacaacaactagcaaattatatcacactacaaatattaagttccttgcggtaataattttaactgaggtgtgttctgtaggatgggaagataagctacgaggagtttgagttaatgatgtcagccggaatggactggaggaatgcatcccggcaatactcgagagcagtttacaacactctcagccgcaagatattcaaggaagtgtccctgaagcttgatcacagtggtccacttgttgcagcaggaaaatagcaaccagctgttaactaagtgatgtgttctctacatgcaatgctcactgcctcactcataactgagagaatgtgaaaaacatggcgcagttttccttgttcgcgtattggtctccacatttttgggatgcaaaggtaccacggggttcagtgaccctgaatgtttcagatgcagatgtcaaagagcaggcttaaatacaccctttctctttctctgaaaacagagggaaaaaaagaaagaaagagttgtatccttctgactttgaagtcactctccatgtttgttaatgtaaaaccagaggtaggccgaatctcatattgttcaacacaggaggcagcaatgccctgtaccactaaccgctttggtgcaaattctccgcggccgcacagtaagggccaaaaaaagaaagaagcaataatataagattgttcaattcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0230200, RefSeq:Os12g0230200