BGIOSGA009616

From RiceWiki
Revision as of 09:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009616| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009616, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009616

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009616, complete gene.

LocusTag

OSJNBA0087C10.4

Ensembl Transcript ID

BGIOSGA009616-TA

Ensembl Protein ID

BGIOSGA009616-PA

Length

5973

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37855666..37861638

Sequence Coding Region

37861505..37861638,37861334..37861391,37861122..37861226,37860732..37860789,37860472..37860647
,37860332..37860392,37859915..37860207,37859335..37859447,37858754..37859147
,37858238..37858555,37857218..37857475,37855666..37856886

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37855666..37861638 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37855666..37861638 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCCTCCGAACACTCGTTATCTTCCTCCTCCTCCTCCTCGCGCTCGTCCCGGCACTCTCGCGCCCGGATGGCGGCGGCGGCGGCTTCTATGACCCGGCGCGCGTCACCCAGCTATCCTGGCGCCCCAGGGCGTTCCTGTACAGCGGCTTCCTCTCGCACGACGAGTGCGACCACCTCGTCAATCTGGCGAAGGGGAGGATGGAGAAGTCGATGGTTGCAGACAATGATTCCGGCAAGAGTATCATGAGCCAGGTGCGCACCAGCTCCGGCACCTTCTTATCGAAGCACGAGGACGACATTGTTTCTGGAATTGAAAAGCGTGTAGCTGCTTGGACATTTCTTCCTGAAGAAAACGCCGAGTCAATTCAGATTCTGCATTATGAGCTTGGTCAGAAGTATGATGCCCACTTCGATTATTTCCATGACAAGAACAACCTTAAGCGTGGGGGTCATCGAGTCGCCACTGTGCTTATGTACTTGACCGATGTCAAAAAGGGTGGAGAGACTGTATTTCCAAATGCTGCGGGAAGGCATTTACAACTCAAGGATGAAACTTGGTCTGATTGTGCAAGATCTGGCCTGGCAGTGAAGCCAAAGAAAGGCGATGCGCTACTGTTCTTCAGTCTCCATGTTAACGCGACAACGGATCCAGCCAGTCTTCATGGAAGCTGTCCGGTGATCGAAGGCGAGAAATGGTCTGCAACGAAATGGATCCATGTCAGATCATTTGATAATCCTCCGGATGTAAGCCTGGATTTGCCGTGTTCCGATGAAAACGAGCGCTGCACGAGATGGGCTGCTGTTGGAGAGTGTTACAGGAACCCAAAATACATGGTTGGCACCAAGGATTCGCTCGGATTCTGCCGCAAGAGCTGCGGGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCACATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCAAGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACGATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCTCGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGACCCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGTATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAGGCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTGTCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTCTTTCATGTGTTTGCGAGGTGGGCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCTCTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCATCCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGACTACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTGTATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACCAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAGAATTGGCAAGCAAGGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGTCAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATACAAAAATTGGTTCTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGA</cdnaseq>

Protein Sequence

<aaseq>MAPLRTLVIFLLLLLALVPALSRPDGGGGGFYDPARVTQLSWRPRAFLYSGFLSHDECDHLVNLAKGRMEKSMVADNDSGKSIMSQVRTSSGTFLSKHEDDIVSGIEKRVAAWTFLPEENAESIQILHYELGQKYDAHFDYFHDKNNLKRGGHRVATVLMYLTDVKKGGETVFPNAAGRHLQLKDETWSDCARSGLAVKPKKGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSATKWIHVRSFDNPPDVSLDLPCSDENERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVCSRSLGKDIGFKIKVSHSDALMILKSWIASQTSFSASMDQMCKFYTFVSEGFATATIDIKREFLSCSSIFTPLNRARSNDFVPGKFLSPKDLYWHDPTGCSEIITEKVISMKNKISMFPRKMLSSAYPSLCEFFTEACGVPKVPKTSDYVDILLGLSNAALPSEVANQVFHVFARWANDLHSANDNMNDILFLEGSLQKLETTILPTLGDKWVSLHPSFGLVCWVDDNELMQHFEDYNGVNFIQFGELSYEDKQLLYGRIAALLKSLGIPALSKVIYREAIFYGTVDNREKVTVISWLLPYMQRYIYKMHRDTYVNFQPNEITKLSNLQVIVVEKLFHKYKLKERESSCKRRFKCNCLLQGNNLYATQEADSHSLFLELSRLFFDGSPDLHFANFLHMVKTMADSGTTAEQIESFIVNNQNVPDLPEHEAVWSFSSLIIADQDVDCQRTEFQSICDSQKTEIRSTCELNISKHQRTSGVASSWPPNDWKTAPDFITSHNSQFTPNQETNLNNVVPSLDLTKTQCENSEDIVGPVDLEGDWITEDDFGSENTVLAERIGATGDEPHMVMSINSANLPAYLDLETGSSANSVVDIELTEFNDKLANVSEKRDRLCIKAPDRDKLLRIGKQGEAAAHQHFVDHFGSNNVRWVNQENETGLPYDIVVTHKSGFTEYVEVKATTNSYKNWFYITLREWQFALEKGNAFTIARVVLKDSKKANDKSNVLILKNPYKLCLNKSVYLALIIPQQYQTKRRYFEGNSDLQSEVNH</aaseq>

Gene Sequence

<dnaseqindica>1..134#248..305#413..517#850..907#992..1167#1247..1307#1432..1724#2192..2304#2492..2885#3084..3401#4164..4421#4753..5973#ATGGCGCCCCTCCGAACACTCGTTATCTTCCTCCTCCTCCTCCTCGCGCTCGTCCCGGCACTCTCGCGCCCGGATGGCGGCGGCGGCGGCTTCTATGACCCGGCGCGCGTCACCCAGCTATCCTGGCGCCCCAGGTCGGTCTGCCTTTGAGCTCTTTCTTGGTTGGGTACTTGGGTCTGCAGTGCTTGGCTGCGCGCCACCTGTTTGGCGATTTGCGTCTGACAGCGCGAGGCTCCTCCTCTTGCAGGGCGTTCCTGTACAGCGGCTTCCTCTCGCACGACGAGTGCGACCACCTCGTCAATCTGGTGAGTTGCTGCTGCTGTGATTCCCTCTTGGTGATGCGAATGGGAGATTGTTGTGAGTTGCGATCTTGATGCTTTTTGTTTTGGGGAATTTGGGGTTGTGACGTTAGGCGAAGGGGAGGATGGAGAAGTCGATGGTTGCAGACAATGATTCCGGCAAGAGTATCATGAGCCAGGTGCGCACCAGCTCCGGCACCTTCTTATCGAAGCACGAGGTAAGCAAAATGTGCATGTTATGCTGCGCAATACCGCTTCTTCAATTTGTTCCTGTATGCTGTTCGGTGCTGCTAATTATATAGCCATAAATTGATCGTATATTCATATATGCGTGGGAGAAAAGAATTTGTCTCTGTGGTTAGTGCATTGGATTAGCTCGATATTGTGTTCGATCATTAGAGATTTCGCCGGATCTGGCTTTATGGTAATGCAAAAGAGATTGATTTGTTCTTCGATTTTAGTTTCTAGAACCTTAGTGTCTTGACTTTGATACGGTACTCTCAAGAGTCAGCATCGCTAACCTACTCCTTTTTATTTTGACCCATTCAAGGACGACATTGTTTCTGGAATTGAAAAGCGTGTAGCTGCTTGGACATTTCTTCCTGAAGGTAATTTCGCGCGACTTTATCTAGTTTGTCTTTTGGAGTTTGGAGCTAGATTACCATTCTCTGGCTGGTCTCTTTCTTGATCAGAAAACGCCGAGTCAATTCAGATTCTGCATTATGAGCTTGGTCAGAAGTATGATGCCCACTTCGATTATTTCCATGACAAGAACAACCTTAAGCGTGGGGGTCATCGAGTCGCCACTGTGCTTATGTACTTGACCGATGTCAAAAAGGGTGGAGAGACTGTATTTCCAAATGCTGCGGTATGCAATTAGCTTTGACATTACCCCCTTGTAATTTCCCAAGACATCTAGTTTAGAAGTTCTTTGCCATTGCTTGCAGGGAAGGCATTTACAACTCAAGGATGAAACTTGGTCTGATTGTGCAAGATCTGGCCTGGCAGGTAGCCTTCACCCCCTATACATTTCTGAACGAAATGGACAATATGAATTGCCTTTCTGCACAAAGTTAATTAACCTCAGTAGTAGGAACTAACGAGACCAATTTATCTTCATCTCCTCTCTCAGTGAAGCCAAAGAAAGGCGATGCGCTACTGTTCTTCAGTCTCCATGTTAACGCGACAACGGATCCAGCCAGTCTTCATGGAAGCTGTCCGGTGATCGAAGGCGAGAAATGGTCTGCAACGAAATGGATCCATGTCAGATCATTTGATAATCCTCCGGATGTAAGCCTGGATTTGCCGTGTTCCGATGAAAACGAGCGCTGCACGAGATGGGCTGCTGTTGGAGAGTGTTACAGGAACCCAAAATACATGGTTGGCACCAAGGATTCGCTCGGATTCTGCCGCAAGAGCTGCGGGGTTTGCGATGCTTAAACCCTGCACCCGCCAAACTGAAGATCTGAAAATCAAAGTGTCATGTTAGGCTGTTAGCTATTTTCGCCCACTTTACTTACACAGTTACACTACTTGAGAAGTTGAGATGTACATAACAGACAAAGCAAGTTTATTAGTATGTGTTTCTGTGTAGTTTAACCTTGAACGATATTGATTGAAAGTAATTGGAACTTTTTTTCAGGTCTAAAGTGCTACTGAAATTTTTCGCAAAAAAGTTGGGAGTATTTCTTTTAGAGGAAAACTACTTCAATTTGCTCTGGTTTCTGTACGCTGCATTCGCTTCGGATTAAAGGTCACTCGTGGGCCTCACGTTTTACCCCAGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAGAAACTGTATTCACCTTAGGAACATAAACTCATTCCTATATATGGAACAGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCACATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCAAGGTACTTGATTTCAATGTCTGTATTTTAATCATAGCATTTTGTGATCTGCAATTTTAGAGCGTATCAGTCATGTAAGGAGTACTAATCTAAATATTCCCAGTCCCCATCTATATCATGTATGTACTGCAGTTTAAGAATGGGATATCTTTGTTCTAAACTTGGTAATGCTTTGACCTTCTTTTTTCAGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACGATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCTCGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGACCCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGTATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAGGCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTGTCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTAAGTTGATTTTGTGCATGAATTACCGAAGATTATATTTTGTAATAGCTCATCAGTATAAAGCTTTTATATATTTGAATGTTGTCTGTAGCTATTTCCAGCTAATTATTGTTTTTACAACAAAACACCATTCTACATGATTTTGTCTTGTAAGGTATCTCCTTTAAATTTCCATCTCTCTTTACACTCTCTATGTAGGTCTTTCATGTGTTTGCGAGGTGGGCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCTCTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCATCCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGACTACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTGTATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTAATTAAAATCCTGTTTTGGGAACGGTCATTGACCTTTTTTATCTACTTTTACCTGGAAGACCATTCATTTTTGTCACTGAGAGAAATTTTAATAATTTCAGTGTTCTTTATTTATGAAAAATATTCTCCAAATTAATCTCTATTAAGAGAACAAATTTTATCATTGAGAGAAAATTTAATAACTTCTGAGTGTTCTTTACTTATGGAAAACATGTTCCAAATTAATCTCTATTAATAGAACAAAAAAAGGGCACAAAATAGAATGATTACTGAACTGGCTGTGGCACCAGTGTGTTTTTCATGCACTTCTCAGATACCTATTTTCTACGATCCACCACTGCTCATCCTGAGTGGGTAGTAGCAAATCGGAGAAACTTCAAGGTGGATGAATCTTGATTATTTTATTTTATGTATTTATTTATTTTGCAAAATATGTTTGGATGATGCTGACTTTACACAGCTTTTCTTTTGCGGGGAACTTTAGCCAGCTGTCAAAATTGACTGCCTTTGATGAGACGCTCAGTTCAGTTGATAGCAGCTGAAAATATGCGTTCTGTCTGAATGCTGCACATGCTTTGATATTTAATTCTTACACATCTTTTACTGATTATGTAAATAAATAAATGCATATTTAACAATTGCATATATACATCAAATTGCTCAAGCATACGAGTAGGAACTTACATATTGAATATTCTTAGCAGCAACTATTGTCCATTTTCTGTATGTTTCTCATCCAGGATTGTTGCCCTTCTCATAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACCAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGTTAGTATCTACCTTTCTATTAACTACCTGCTCTTCATTTGTTTCTTATTCTTATAAGAAAGAGAACTTCTGGAGAAGCCCTTTTTGCTAGAATTCCACCCACAAACAATTGTATTTCAAGTTCTGATTATTTTGATTTATTTTTTTCCACATGTGGAGGCCTGTAGGGTAGCATTATTTATCGACCTCCTTACCTTCTAAGCTTCATGCCTTTTGAACTTTATGCTATGCAAATGCATGCATAATGTACTCATTACTCAACAGTAAAATTTTACTCTGATAAAGTCAGCTCTGATTTCCCAAATCCATTTGTTATGTTCCTTATTTCCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAGAATTGGCAAGCAAGGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGTCAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATACAAAAATTGGTTCTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009616

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009616&oldid=54439"