BGIOSGA009625

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Revision as of 09:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009625, complete gene.| tag = OsI_139...")
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Gene Name

BGIOSGA009625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009625, complete gene.

LocusTag

OsI_13940

Ensembl Transcript ID

BGIOSGA009625-TA

Ensembl Protein ID

BGIOSGA009625-PA

Length

5423

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37749868..37755290

Sequence Coding Region

37754978..37755290,37753450..37753520,37752446..37752752,37751968..37752337,37751606..37751717
,37750069..37750715,37749868..37749985

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37749868..37755290 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37749868..37755290 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGCAGCTGCTGCTGGGCGAGGACGGGAGGGGGTACGACCTCGCGCGGCGGCTGGAGGCGTGCGGCGCGTGGCGGGCGTGGCTCGGGGACGCCGCCCATGCCGCGCTCGCGCAGCACCTCCAGACCCCCTCCACCTGGGACGCCTTCCTCTTCCCCTCCTCCGGCGGCGGCTCCGCGGCCCCACCCCCTCGCCCGCTCCTGCTCCTCCAGCTCCGCGTCCGCGCGCTCCTCTTCGACAAGGCCTCCGCCGCGCTCCTCCCCCGTGGCGCCCCCCCGGCGGGCCTCAACTCTGTCAACGCCAACTATCTTCAGCTCCATGCAGATGATATTTATTTTTCATTGGAAGATGAGCAGGAAGATATCAATCAACACCATATGCAATCTAGAACCTCATTTAGTCCAAGCAGGGAGAACACTATGTTATCTCAAAGACATAATCGATACGAAGAGTTACCTGACACATGGTACAAACAATATGCTGAAAAATTCAGGACATGGCATGGCAAGTTCCGTTCAGGTGACAAAGATATACCAAAAAGAACATCAGAGGGAATGTCCAATTACCTGAAGGTTTGCAGTGTGCATAAAAGGAAGAGGGCTGTGTTTATGGATGATCAGGGTCACAACATCTCAGTCCCAATGTCGGAAAATGGCCCTTCCTCAAAGAATGCTGGGGACTATAAAGTCCATGGGGTTCTTGATAATTTACCGGCGCCTGTTAGTCGCAACACTGCAATGCTTGAAAGATTTGGAATGATGCCTGAGTATTATAAGAAAGGGAACAAATATCGAGGGAAAGATGGATCCAGAGTAGAAGGAAAATCTCTAAGCCAAGAACAAGCAATGCTTATGACAAGGAAGTTGGTTGCTCGCTACTTGGCAAATGCAGGATTTGAAAGTGGAACTGCAGTGTGTATTGATGTTCTTTCAGAAATAATAATTAAGCACATCTCTAAGCTGGGGCGTAACTTGAAGCTTCTAACTGACAGCTACAGGAAGCAATTTTCATCCATTGAACTCCTTAAGATGTTCCTACAGACTGTTGGCTACAGTAACATTGGCCCCTTGATGGAAATCACTAAAACGACAAATAGAGGGGCCAACTACCCTATGCAGCAAGATGCACAAGTGCAAAATCAAAATGCTCTTCTTCATGCACAACAGCTTTCGAGGCAATTTGCACCCCAAATGGGAATTAATACACAGAATTTGACACCACAGCAGCAGCAGCAACTGCTGCAGCAACAGTGGTTGAGGCGCAATCAACTGGCCAGCCCCCGTGGTCCTCTTACGATGGCGGACAAAAACCAGGCTATGGTAAATGTGAAGATTGAGAATACGGTGGACTCACAGATTGATAGCCCCTACGGATCACTTACCAGACAACAATTGCAGCAGCTAAGGCACCATCAGCTTCTACAGCAGCAACAGCAGCAGTTTCAGCAGCAACAGCAAGTTCAACAGCAGCAGCAACAACAACAACAACAATTTCAACACCAGCAGCAACAACAGCAGCAGCAATTTCAACAACAGCATCAGCAGCAGCAACAATCACAGCAATTGCAACAACAGCATCAGCAGCAGCAACAACCACAACAATTGCAGCAGCAGCATCAGCAGCAATTGGCCATGTCAGGAGGCCAGAATGCCCAACTAGCGCAGCAGCTAGCAATGTCAGGAGGCCAGAATGCACAACTAGCGCAGCAATTAGCCATGTCAGGAGGCCAGAATGCGCAACTAGCTCAGCAATTAGCCATGTCAGGAGGCCAGAACCCCCAATTAGCACAGCAATACAAACAAATGCCATCGATGAGTGCGTACGGCATGAGGATGCCGCCGGTGAAAGTGGAAGCGTTCCACGAGCTGGTGAGTGGAGATTCGTCTCTGAAACCCGATAGCGACTCAAACAAACTCATGTCTCCCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAQLLLGEDGRGYDLARRLEACGAWRAWLGDAAHAALAQHLQTPSTWDAFLFPSSGGGSAAPPPRPLLLLQLRVRALLFDKASAALLPRGAPPAGLNSVNANYLQLHADDIYFSLEDEQEDINQHHMQSRTSFSPSRENTMLSQRHNRYEELPDTWYKQYAEKFRTWHGKFRSGDKDIPKRTSEGMSNYLKVCSVHKRKRAVFMDDQGHNISVPMSENGPSSKNAGDYKVHGVLDNLPAPVSRNTAMLERFGMMPEYYKKGNKYRGKDGSRVEGKSLSQEQAMLMTRKLVARYLANAGFESGTAVCIDVLSEIIIKHISKLGRNLKLLTDSYRKQFSSIELLKMFLQTVGYSNIGPLMEITKTTNRGANYPMQQDAQVQNQNALLHAQQLSRQFAPQMGINTQNLTPQQQQQLLQQQWLRRNQLASPRGPLTMADKNQAMVNVKIENTVDSQIDSPYGSLTRQQLQQLRHHQLLQQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQQQFQQQHQQQQQSQQLQQQHQQQQQPQQLQQQHQQQLAMSGGQNAQLAQQLAMSGGQNAQLAQQLAMSGGQNAQLAQQLAMSGGQNPQLAQQYKQMPSMSAYGMRMPPVKVEAFHELVSGDSSLKPDSDSNKLMSPK</aaseq>

Gene Sequence

<dnaseqindica>1..313#1771..1841#2539..2845#2954..3323#3574..3685#4576..5222#5306..5423#ATGGCGGCGGCGCAGCTGCTGCTGGGCGAGGACGGGAGGGGGTACGACCTCGCGCGGCGGCTGGAGGCGTGCGGCGCGTGGCGGGCGTGGCTCGGGGACGCCGCCCATGCCGCGCTCGCGCAGCACCTCCAGACCCCCTCCACCTGGGACGCCTTCCTCTTCCCCTCCTCCGGCGGCGGCTCCGCGGCCCCACCCCCTCGCCCGCTCCTGCTCCTCCAGCTCCGCGTCCGCGCGCTCCTCTTCGACAAGGCCTCCGCCGCGCTCCTCCCCCGTGGCGCCCCCCCGGCGGGCCTCAACTCTGTCAACGCCAACTGTGAGCCCCTTCGACTTCGCTGATCGGTTGATTGACTCTAGGGATCTGATGCTGGAATCGCTTGGGTTTGGGTTTTTACTGTAGCTACAAGTCGGGAGAAAGTAGCTTGATGGTGTTCTAGGTTTCGTGGCATCTTGGGGCGGATGAGGTTTATGTTTAGTGACTCCGGGAGTGAGATATTGTTCAGAAAACAGCATTGAGCGTGTTCAGAAAATAGCATTACTGCATAACTGGTGCTGCCTACTTTTAACTGATCTGTGATTTAGCGCGAAAACGTTATAATTGCGCAGCGCCACTTCCCCGTTGTGATGGCAGGTGAAAAATGTTAATTTGGAACGTTTTATTGTTTACTGGTAAGTAATGATTGCGCTGGACCTTAAGTAGTTTTCTAATGTTCTAGCTGGACGGGATATTTAGTCTAACAATTAGTAGTTAGTGTTAGTTAGCTCTTAACTAATATAGATCATATCTTGTTGTACACAGCCAATGGCCTATATATGTTGGGGGCATTTGCCTCAATGAAGATTATCGCGTGAGGTCTATCATGCCTTCATTTATTACTTGCGAATTTCACCAGTAAGTGCGATCAAGGTTTATATGTGAGGACAACTGAGATTTCTGCCCCATATGCAAAGGAAAGTCAATAATCCTGCTAAACTAAGTTGGGTTATTAAGATGGGAGCTAATAGGAAATGGAACCATTAAAGTTGGTAATGATGGAATGGGATTTTTTTTATTCACATCTGCCTGTTGTTGCAATCTAATATAGAGTTATATGTGAGAGAAAAATGGCTCGTTTTTTTGTAGGGGTTATATCTTTAATTTATTGGGACTTTTGATTCTTTTTAGGTGGATGTAAAGTTATATAGTTGTTGAAGCAACTGACCAGAATTTTAGTTCCGCTGGTTTGTGTTTCACTTCATGGAGGCTAAATGATGCCACCTAAATCCTACATTACTGTAAAATCAGCTAATATGTTGAACTAATTTAATGCCGCCATAAAAATGTTGGCTATCAGGTCAAACTTGATAAAAATATCAACCTTTATATGCTAGTATACTAGTAAGCTGACATCGCAAAGGAGGAGCTTTGCTTGATGTTTTACTTGGTTAAATTTGAGCTATAAGATCAAGGAATGGTTTGTCTAGTATTATGGATCTCATTCAAATAAAATTTGATTGAAGTATTTTTCTTCTTCAATATTTCTAACTTTATTTTGGGGTTTTGATTAAAATAAGATGATATTTTGGTTTATTACATATCCTTTTGCACCTTTGTGAAAGCCATATCAAAGAAATTAACCACATGCAAATGCGACAATGTATTGCGGTTGTCAACCAAGAAGCCTTTTAATATTCAAGTTCAACTAGTTATTTCTTCAATGTAATTACTTGGTATAAGAATTCATTTTTTTATTTGCCATTATTCATAGTGTTATTCTTATCTGTTTATCTCAGATCTTCAGCTCCATGCAGATGATATTTATTTTTCATTGGAAGATGAGCAGGAAGATATCAATCAACACCATGTATGTTATCTCTAATGTTTTTTTTAAAAAAACTTTTTGGGAATATCAGCATTGTGTGACTCTTTCTAGAAAACCCCTTTCTCTTTCTTGATCTGTTGAGTGATATGCTATTCTATGCAACAATGCCAGCTACCATGTATGAAGTAAGATTCAAGTTGTACGTTACAGTTGGATTTCACGCACTATCTCTTTCCAGTTGAGCACCATTGTCGCAGTTTTGTCTTTTATGTATTATGTACTATTGTATAATCATTGCTTATGTGAAGCATCCTTTTAGTATGCTAGTGTTCTCTTTCTAGATCGGGGCTTGTTCACCGTCTGAAAACTTCACACATACAGCTGTTAGGTNTTACGGTATACTTTTAATGATAACCACATGATTAGTTCCTTTTTAAGAGATGTGTTGACTATTGACCTCAATTTTGTGTTAATTGTCATTCTGTAGTCTGCTTAAAGACCAGCATATGCTACTCATTGGTCCAAAAATAAATCTAACTTCTTTGGACCGTTCACATAGGTGATAGGTCAAGCTATGTAACTGCTGGCCATGCCATGCATCATTGGATAATCTTTCTAGTTCACTGTATTAAATGTGCACTAATTATGTATAGCATTCAGCTGCAGGTGGTGCATACTAACTAATGTTGATGTGATTCATATGCTATGCTGATGGTTATATTTGTCCTTGCTGCTGCAGATGCAATCTAGAACCTCATTTAGTCCAAGCAGGGAGAACACTATGTTATCTCAAAGACATAATCGATACGAAGAGTTACCTGACACATGGTACAAACAATATGCTGAAAAATTCAGGACATGGCATGGCAAGTTCCGTTCAGGTGACAAAGATATACCAAAAAGAACATCAGAGGGAATGTCCAATTACCTGAAGGTTTGCAGTGTGCATAAAAGGAAGAGGGCTGTGTTTATGGATGATCAGGGTCACAACATCTCAGTCCCAATGTCGGAAAATGGCCCTTCCTCAAAGAATGCTGGGGACTATAGTAATTTAACAGATGATACTTTCATTCCAGGAAATTAGGTTTCCAGCTGACTGTGTCCCGGAAAGCGCATTCCTAGAACAAGTGAGACGTCTAGGATCTACAAAATAGAAGTCCATGGGGTTCTTGATAATTTACCGGCGCCTGTTAGTCGCAACACTGCAATGCTTGAAAGATTTGGAATGATGCCTGAGTATTATAAGAAAGGGAACAAATATCGAGGGAAAGATGGATCCAGAGTAGAAGGAAAATCTCTAAGCCAAGAACAAGCAATGCTTATGACAAGGAAGTTGGTTGCTCGCTACTTGGCAAATGCAGGATTTGAAAGTGGAACTGCAGTGTGTATTGATGTTCTTTCAGAAATAATAATTAAGCACATCTCTAAGCTGGGGCGTAACTTGAAGCTTCTAACTGACAGCTACAGGAAGCAATTTTCATCCATTGAACTCCTTAAGATGTTCCTACAGACTGTTGGCTACAGGTACTTTAACCTATTTTATATACGCGCCTCTTTACTTTTTTCCCTTTTGTTTTCCCTGTGTTCTTTTTGGTATTAGGTGCAGGGAGATGCCTTCTGTGTTACTATATATACTAACACATCAGTTCTTGCCTAAAGGAGCTAGTAATAAAATTGAGTCATGTTGATGGCAGAGCATGTGTATTTAATGCATTTTTTTTCTATAAAATTACATGCCAAAGTTCTGATAGTGATTTTCTGCTGTAACATTTAGTAACATTGGCCCCTTGATGGAAATCACTAAAACGACAAATAGAGGGGCCAACTACCCTATGCAGCAAGATGCACAAGTGCAAAATCAAAATGCTCTTCTTCATGCACAACAGGTAGGAAACTGCTGCTGGCTCACCATACTTGTATTATGTATATCTTAATATTTCTATATTCTAAAGCATATATGCTTCCTTGCTGAGGAAATGGTTTAGTTAGACTCTTAAGAATTTCTACCCATCAACTGTGCAAGGAGGGGTGGTTTTAGCCAACTAAAAGAGGCATAAGGCTGTTTGATTCAGAATAATTAATACACTTAGCCATCCAAGGATAGATCACTGATTAAACAAGCCTTCGGTGTCTTCCACTCGATTTGGTTTATGGGAGTGAATATTGCCTGATGATCACTGATTAATATTAGAATCTGGCCGTGTCTGTGATGACTGTAAAGTTTTGTCTGATGTTGCTTTCTCTTGTAGTGAAACTCTTCAATCAATCTATCAGTGGCGTAGCTAATATTCTGTCTGGTTTTGTTAAGTTCCTAGGAATGCGGTGGTATCAGATAGTTCCTTTGAACTTCTTCTGATGTGAAATTAACCAGTAACAGTTAGCCCATGAACCATATGAACTTTGGATAGTATTGGAGCAAACTAATGCCCATCGCATAGAAACGACTCCTAAAATCAGTGTCCACAATTCATGAATCACATCATAGATCACTGATTGGCCACCTGATTGAGCTTCAGATAGAGAATTGGGTTGGTAGTAAAATGATTTGTGAAGCAGGGCGTTTAATATCTGGTTTTCAGCAGTGAACATTAATGAATACCTATATGTGTACAACTTTTTATTAGCCAGACCGTTCAAAGCAAATGGTTGCTGTATTTCATTTTTGTCAAGCATGATATAGCCACTGCCTACATATGTATGCTCAGTCGAGTTGCTGAAATATTTTTCTTCATTTGATTATTGAATTGATTCATAATTACATATGCACCACTGGCAGCTTTCGAGGCAATTTGCACCCCAAATGGGAATTAATACACAGAATTTGACACCACAGCAGCAGCAGCAACTGCTGCAGCAACAGTGGTTGAGGCGCAATCAACTGGCCAGCCCCCGTGGTCCTCTTACGATGGCGGACAAAAACCAGGCTATGGTAAATGTGAAGATTGAGAATACGGTGGACTCACAGATTGATAGCCCCTACGGATCACTTACCAGACAACAATTGCAGCAGCTAAGGCACCATCAGCTTCTACAGCAGCAACAGCAGCAGTTTCAGCAGCAACAGCAAGTTCAACAGCAGCAGCAACAACAACAACAACAATTTCAACACCAGCAGCAACAACAGCAGCAGCAATTTCAACAACAGCATCAGCAGCAGCAACAATCACAGCAATTGCAACAACAGCATCAGCAGCAGCAACAACCACAACAATTGCAGCAGCAGCATCAGCAGCAATTGGCCATGTCAGGAGGCCAGAATGCCCAACTAGCGCAGCAGCTAGCAATGTCAGGAGGCCAGAATGCACAACTAGCGCAGCAATTAGCCATGTCAGGAGGCCAGAATGCGCAACTAGCTCAGCAATTAGCCATGTCAGGAGGCCAGAACCCCCAATTAGCACAGCAATACAAACAAATGCCATCGATGTAAGTACCTGTACCTCCTCAACTCTATTGATCTGTTTAAAATCTATGCTTCCATCTTGTTAACCCCTCTGATCTGATTGCAGGAGTGCGTACGGCATGAGGATGCCGCCGGTGAAAGTGGAAGCGTTCCACGAGCTGGTGAGTGGAGATTCGTCTCTGAAACCCGATAGCGACTCAAACAAACTCATGTCTCCCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009625