BGIOSGA009680

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Revision as of 09:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009680| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009680, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009680

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009680, complete gene.

LocusTag

OSJNBB0024J04.25

Ensembl Transcript ID

BGIOSGA009680-TA

Ensembl Protein ID

BGIOSGA009680-PA

Length

3132

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37014888..37018019

Sequence Coding Region

37017888..37018019,37017743..37017789,37016483..37016545,37016310..37016409,37015831..37016198
,37015634..37015741,37015324..37015549,37015204..37015265,37014888..37014996

Genome Context

<gbrowseImage1> name=IndicaChromosome03:37014888..37018019 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:37014888..37018019 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCAGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTATAGACCAAGGACATATGGGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATCCATCTCTGCATGATGAGAGAGCAATGAGCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGA</cdnaseq>

Protein Sequence

<aaseq>MDEKVKMESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAVFHHPVLGDFEVPVGADDAELEERIIQHLAAAAAMRRSHRHGRRDGHRSRSGSHSRPQIVVFSRNEAIPGGSLHASSGQDEDHEQSSDLGSAHPFAALAAIDQGHMGGGSQLYVGHSDQGASNPSLHDERAMSRTSENQSAPVNQDTAGPSDLQSFSDTLRSRLQSASMKYKDSITKSTRGWKERWFSRSNTISGLGTEVRREVNAGIAAVSRMMERLETKDDTGPSAVPAASACSPSDANNQRTDLALNEPTPCSLKNWIHCEDRKFAEAFASRSRDIRLVLADEPLHFFTLCNIYARLL</aaseq>

Gene Sequence

<dnaseqindica>1..132#231..277#1475..1537#1611..1710#1822..2189#2279..2386#2471..2696#2755..2816#3024..3132#ATGGATGAGAAGGTGAAGATGGAGAGCAAGCTGTCCTCCGCGGCAGCGTTCGTGGAGGGAGGTGTGCAGGACGCCTGCGACGACGCCTGCAGCATCTGCCTCGAGGCCTTCTGCGACAACGACCCCTCCACGGTCTGCATCCGCCGAGGCGAAAATTTTGGATTCGATATGATTGTGATCGAGTCGCTCATTTGTTTTCTTGGTGTGGATGTTGGCGTTTTCTCTTGCAGGTGACGAGTTGCAAGCATGAGTACCATCTGCAGTGCATTCTTGAATGGTAATGTTTCCTTGCTGGCCTATTGGAACGATATTGTTGTGTGGTATTTTTCTTTTTCTGTACTTCTTTGTGGAGCTGGTTATGCATTGCAATCGATATAGATGTAAATTACGGTAATTGAATCATGCATATTGCATAATTTATTCTAAATTTAAGGTTGCTCTTGTTTCCACAAAGCAAACTATCCGATATCACCATGACTAGTTTGCTTGTGTACCTCAGTTTTATATGATGCAATCCCTGATTGTTTGTTTTGTTTCTGTATCTTCTTTTCCACCTAGATAAAGTAAAATAAACGGCCATGCTTTTAGCTGCAAGGTGATAAAGGAAGTTAGTGTTTGTCTGGCAATTGTGACTACACATCGATGGTTCAATTTAACTGTGCTGTGGGAACTACATCTAATTTGCTAGGGTTGCAAAAAATATTTGTTTTTAAGGTGATGGTGATTATCTGCTTACACTATTTGAATCTATGCTTGTTGTCGTGCTGAAATGCTGTCAGTAAAGTGGAACTACCACATGATTTATAAGACGAAAATGGGATCTTACATTCCAGAAACAGATCATGTGTTAGGCATCGCAATGCTCTTCAACCATGATCGACTTGTATATGAAGGTTAATGATGATCACCTGCACTTTAAGCAGTGAATAACCATACAGAAATTCTCCAGCATATGAGACTCAATAAGCCATTAAGGAGCATATGATCCACAGACTTTCATTATTTCAGCAATACCAGCCTCCATCAGGTGGGGCAGGGGTTGTAAGGCTTCTGAGCTGCCCAGCTGGAAGATTTCCTTCATCTGTGCAAGCAGTCTAGAACGATAGCTTTGTCGTAGTAGTTGTGAGCGTGCAGTTCTTCTGCAGTATGCTCATAAAACTATCGTTGCCCTTCTGGTGTCTATTATGGACTGATGGGGACATATTCTAAATATTTATTCTATACGAGCTTGCAGATACTAGAGATGTACAAAAAAATAATTTATGTGCGATCAATCTGAAATGGAGGATATAATATATTCTCATGCTTTCTTTTTATGAATACGAACGATTTTGAGGGTGAGCTCATGTGATCAAGGATAATGCTGTATATAAAGTCAATATCCAATCGATATGTAGTGAAAATTTGTCAAAATACTGTACTGTCCTCGACAATATTAATTTTTGATGTGTGCTTCTCACTGTTTGATATCTAGGTGCCAGAGAAGCTCTCAGTGTCCCATGTGTTGGCAGCCTATCAGCATGAAGGATCCTATGAGGTAGAACTTGCATCCTGTGTATCTCCCTAGTGAACCAATTTAGTGGTTCTCATTTTATATTTGAACTGTGCAGCCAAGAACTACTTGAGGCTGTTGAGCAAGAGAGGAACATTCGAGCTAACCGTTTGAACACTGCCGCTGTTTTTCACCATCCAGTATTGGGTGATTTTGAGGTGCAGCACGTTTTATTGCTATCATTTGGATATTTGCGATGATTCCTCTTTGCACCCTGGAGGTAGGCTTAATTCATACAACTATATTGATGTACCGTTTTCTGATTTCAGGTCCCTGTAGGAGCTGATGATGCTGAACTTGAGGAGCGCATTATACAACACTTGGCTGCTGCTGCTGCAATGCGTAGGTCACACAGACATGGTAGAAGAGATGGACATCGTAGCCGATCTGGATCTCATAGCCGCCCACAAATCGTGGTGTTTTCAAGGAATGAGGCTATTCCTGGTGGCTCCCTGCATGCAAGTTCAGGCCAAGATGAAGACCATGAACAATCTTCTGACTTAGGTTCTGCTCATCCTTTTGCTGCTCTTGCTGCTATAGACCAAGGACATATGGGTGGTGGTTCGCAGCTATACGTGGGTCATTCTGACCAGGGTGCTTCAAATCCATCTCTGCATGATGAGAGAGCAATGAGCAGGTATTTCCTACAACTTACGGTATATATTTGCATGCTATTCCTATCCAAATTCAAGAGGTTTACTCTCTTTGTATCTTGATGTTAATCAGGACATCTGAAAATCAATCTGCACCTGTCAATCAAGATACAGCAGGACCATCTGATTTGCAGTCATTCTCTGACACGCTGAGATCTCGCCTACAGTCAGCTTCGATGAAGTAATATCTCAAACTCCTGAAAATGCCTTACACATTGAACGTATGCATCAGTGTCTTACTTGTGGGCATTCTTTACAATGCCAGGTATAAAGATTCTATAACAAAGAGTACGCGTGGATGGAAGGAAAGATGGTTTTCTCGGAGTAACACTATATCAGGTCTTGGCACTGAAGTAAGGAGGGAGGTCAACGCTGGGATTGCTGCGGTATCTCGCATGATGGAACGGCTAGAAACAAAGGACGATACTGGACCATCTGCTGTTCCTGCAGCTAGTGCTTGCTCTCCTTCAGACGCAAATAATCAAAGGACGGTATCCCCCAACCATGCTGCTGTTGTAAATGAAACTTCTTCCACGACTTGTGCGTCAGGATCTGGCTCTCAATGAGCCCACTCCATGTTCGTTGAAGAATTGGATACACTGTGAAGACAGGTATATATGCTCTTCTTGTGCACGAGAAAGCTTTAAAATTTTTAAGGTTTTGGGGTGGCAAAATGTCACAAGAAACATTTTCCTTTAGTAGTTTCTGAAACCGCTGTCAAATTCACTTGGATCAGGTCCAGAGAGAAACGCCGTTTGTTCGGAGCCACCTGAGATCCAGCGATGCTTCATGATCTTTGGTAGGTCTGTGTGCTTCAGGAAGTTCGCTGAAGCATTTGCATCCAGATCGCGGGACATAAGACTTGTGCTTGCGGATGAACCTTTACATTTTTTTACCTTGTGTAATATATATGCAAGGTTGTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009680