BGIOSGA009687

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Revision as of 09:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009687| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009687, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009687

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009687, complete gene.

LocusTag

OSJNBB0024J04.8

Ensembl Transcript ID

BGIOSGA009687-TA

Ensembl Protein ID

BGIOSGA009687-PA

Length

3001

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36937868..36940868

Sequence Coding Region

36940764..36940868,36940047..36940283,36939651..36939878,36939400..36939513,36938136..36938601
,36937868..36937986

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36937868..36940868 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36937868..36940868 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCATCTCGGCGAGGTGGCTCAAGTCGTTGGTTGGGATGAGGAAGGTGGAGAAGCAGCAGCAGCAGAGCAAGGAGGATGGAGATGGTGGGCGAGTAGCACAGAAAAGGGACGGTGCTAACCATTTTCACTGCCAAAATCAGCATGGTCAAGACCATGATAACCTTGGAGCACCAGAAGAGTTTCCTGATGAAAATGGTCCATCAGAAGGTGATAGCAATGCACTTTCGTGCTCGGAACCCGCTTTTAGTTCACCTAACGTGCCTGTGCCTCAGACTGAAGAAGAACTCAAGGAGATCTGGGCTGCTACAGTTATTCAGACTGTGTTTAGAGCCTTCCTGGCTAGGAGAGCCCGTCGGGCTTTAAAAGGACTAGTTAGGCTTCAAGCCCTTGTAAGGGGTCATATAGTGAGAAAGCAAGCTGCTATAACACTCAGGTGTATGCAAGCTTTGGTGAGGGTTCAAGCCCGTGTTAGAGCAAGGCGAGTGCGCATTGCTTTGGAAAGCCAGACAGATCAGCAAGCTATTCTACAAGAGAAAATAAATGAGACACATGTGCGGGAAATCGAGGATGGTTGGTGTGATAGCATAGGATCTGTGGAAGATATCCAAGCAAAACTATTAAAGAGGCAGGAGGCAGCAGCCAAACGCGAACGAGCCATGGCCTATGCTCTAACTCACCAGTGGCAAGCAAGGCAACATGCAGCCATTACAGCATTTCAACCTGACAAGAACAGCTGGGGCTGGAATTGGCTAGAGAGATGGATGGCTGTTCGTCCATGGGAGAGCCGATTCCTGGGCTCTTATGCAGCAGATGGAATTCCTGTTAGTAGTGGAGCAATGCAAGACGAGGAAAATGCTTGCTATACTCCACATAAGAAACATGTTAGAAGACAAACTTCAACACTTCATTCAAACATACTGAACCAGAAGACCTGCCTACCAAACTCAGAGGGCGGTGGTTCCTCATCGAACCGGTCTGGTGGTTCGGCATCGGCTAAGTCAAAACTGAAACTGTCATCCAGAGAAGGACGTGATGAAATTTCGTCTCGTCCTTCGGGACTTGGAACTAGGTCGAGTAGTAATCCTAAGGAGAGGACTGGGCATTTAGATCCTCAAGGAAATAAGAGATTCTCCTTACCTGCCAGCTGTGTCGAAGCAGGCAAGCGCATGACGAATAAATCTGCGGTTAACCGGTCCCTAAAGGTCACTAAACATCATCTTGCCAGTTCAATTGAGTTGCCTAGAAGAGTTGAGCTGCAGACTTGA</cdnaseq>

Protein Sequence

<aaseq>MGISARWLKSLVGMRKVEKQQQQSKEDGDGGRVAQKRDGANHFHCQNQHGQDHDNLGAPEEFPDENGPSEGDSNALSCSEPAFSSPNVPVPQTEEELKEIWAATVIQTVFRAFLARRARRALKGLVRLQALVRGHIVRKQAAITLRCMQALVRVQARVRARRVRIALESQTDQQAILQEKINETHVREIEDGWCDSIGSVEDIQAKLLKRQEAAAKRERAMAYALTHQWQARQHAAITAFQPDKNSWGWNWLERWMAVRPWESRFLGSYAADGIPVSSGAMQDEENACYTPHKKHVRRQTSTLHSNILNQKTCLPNSEGGGSSSNRSGGSASAKSKLKLSSREGRDEISSRPSGLGTRSSSNPKERTGHLDPQGNKRFSLPASCVEAGKRMTNKSAVNRSLKVTKHHLASSIELPRRVELQT</aaseq>

Gene Sequence

<dnaseqindica>1..105#586..822#991..1218#1356..1469#2268..2733#2883..3001#ATGGGCATCTCGGCGAGGTGGCTCAAGTCGTTGGTTGGGATGAGGAAGGTGGAGAAGCAGCAGCAGCAGAGCAAGGAGGATGGAGATGGTGGGCGAGTAGCACAGGTTCTCTCATCCATTGTTCTGCTCCTTGTCCTTCTATTTTTCTTGGCATTTTTGGTTGATTTTGATGGGGGTAGCCGGGAATTCGACTAGTTAGTTCGTGTTAAAATTCGACAACAATTTGCTGAAAAGAAATGGGGAAGTGCATCTTGATCATGTCATGGGGAATTCTTTGTTGTAGTGATCAACCTGGGGTATTCGTTCTCCGCTAAATTAAGACTACAGTTGGTACTTCTTGCATTGCTTGTTTGCCTTGTGTAAATTTATGAAGTTACTGCAGATCTGGATGATAATATCTGCATCATTTTTTTTTTGGCTTCTATGCCACTGACAAAAATGTTGAAAGATGGAAACCACTATGTCTTTTTTTTTTAAAGAAATGGAAACCATCGTGTTAACAATTTAGCATTGCATTGTTCGTATATAATAACTTTTTTTTTATTTGGCTGGGTTTGTAATAACTTGTGAACTGTGAAATTGCAGAAAAGGGACGGTGCTAACCATTTTCACTGCCAAAATCAGCATGGTCAAGACCATGATAACCTTGGAGCACCAGAAGAGTTTCCTGATGAAAATGGTCCATCAGAAGGTGATAGCAATGCACTTTCGTGCTCGGAACCCGCTTTTAGTTCACCTAACGTGCCTGTGCCTCAGACTGAAGAAGAACTCAAGGAGATCTGGGCTGCTACAGTTATTCAGACTGTGTTTAGAGCCTTCCTGGTATTGATGCTCTCTCTCTCTCTCTCTGCCAATTTAGTAACTAGTCCAAGTCCAATGCAAAGTATATGCAAACATAGAATTGCTGAAATGGAATTATGGATTTTCCCATGATTCCCAAATGTTTGGTTCTTCAGGCTTTACTACAAGTTTAACTTGAATTCTCTTCAGGCTAGGAGAGCCCGTCGGGCTTTAAAAGGACTAGTTAGGCTTCAAGCCCTTGTAAGGGGTCATATAGTGAGAAAGCAAGCTGCTATAACACTCAGGTGTATGCAAGCTTTGGTGAGGGTTCAAGCCCGTGTTAGAGCAAGGCGAGTGCGCATTGCTTTGGAAAGCCAGACAGATCAGCAAGCTATTCTACAAGAGAAAATAAATGAGACACATGTGCGGGAAATCGAGGTGAGTCGCACTTTCAGTAGTTTTCCAGGTAGGCTTGCATGCATGCTCTTCTCAATTTTCACAAGGAAATAACTGGCATGAAAGTGCAGTGATTTGGCTTGAGTTGTTTACTTATGCTATTTACCTTAAAAATGCAGGATGGTTGGTGTGATAGCATAGGATCTGTGGAAGATATCCAAGCAAAACTATTAAAGAGGCAGGAGGCAGCAGCCAAACGCGAACGAGCCATGGCCTATGCTCTAACTCACCAGGTAACTTTATCAAACATTTTACACCAGGACAATACTCAGCTATGATTATCCAATTAATCATATGAACCATGGATTATAGCGTATACTGTAGTGCACCAATCAAATTGGTCTGTATCCAAGTATAGCTTCTTGATATCATGAAAGTAATCGACTCACTGTCATCTCCAGCATGTAACAACAAGCATGCTTGCTAAGTTGCTATTGCTGGATTCCAAACGTTGCTTTCATGGATAACAGATGATGTTGTCTCTCCCTCCAAGTTAACCTAATAATTAGGCTGCTTGTTGTTTCCGACTTTCTGTACTGTTCTGCTTCTGTTGGTTAGCGTTTAATTGTAATTTCAGTATGTAGCTAAGATGAGACCTATTTGCATGCTCCTTCTGGAGAAAAAGAATCCAATCATGATAAATGAAATTATTTAGACAGTTCACCGTATGTTGGAGAAGTAAGAAAAGGGAGCCTTTTTCCAGTATGTGGTTGAGGTCAAATAATTTTTTCATGCAGTAACCCCTTCCAGAAATAAGATGAATTCATATCTCTAAAAGTTTTCATTGGTTCAGGTAGTAGATTGAGAATTTTTCTAGTCCTTCCCATCATTGATGTCAGATACACTGTCCCAATGACTCTGTAAGAACTGATCTCTCATCAGTTGTGGCCACATCTCAAGTCACTTTGTGTTGGTCTTTGGTGTGCTTCCATACTTTTTGAGGGCTTAATTCCATTTCTGATAATAAAATAAGACTTAAAGGGAGGTCATTAAAAAACTTGACACCTGAACCTATTTTCCTCCTTTCGCAGTGGCAAGCAAGGCAACATGCAGCCATTACAGCATTTCAACCTGACAAGAACAGCTGGGGCTGGAATTGGCTAGAGAGATGGATGGCTGTTCGTCCATGGGAGAGCCGATTCCTGGGCTCTTATGCAGCAGATGGAATTCCTGTTAGTAGTGGAGCAATGCAAGACGAGGAAAATGCTTGCTATACTCCACATAAGAAACATGTTAGAAGACAAACTTCAACACTTCATTCAAACATACTGAACCAGAAGACCTGCCTACCAAACTCAGAGGGCGGTGGTTCCTCATCGAACCGGTCTGGTGGTTCGGCATCGGCTAAGTCAAAACTGAAACTGTCATCCAGAGAAGGACGTGATGAAATTTCGTCTCGTCCTTCGGGACTTGGAACTAGGTCGAGTAGTAATCCTAAGGAGAGGACTGGGCATTTAGATCCTCAAGGAAATAAGAGATTCTCCTTACCTGCCAGCTGTGAGTAAAAATCTCGCATCATCTGCATGTGTTCATGTTAAGCCTTTTCTCCTCCTTGTGACATAACTGACCTTATCTAGTATACAATGTTTCTTAAGGCTCAAACTCATACACTTGCAATTTTCTAACCAAATTTCCCTAACTCTCAGGTGTCGAAGCAGGCAAGCGCATGACGAATAAATCTGCGGTTAACCGGTCCCTAAAGGTCACTAAACATCATCTTGCCAGTTCAATTGAGTTGCCTAGAAGAGTTGAGCTGCAGACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009687