BGIOSGA009715

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Revision as of 09:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009715| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009715, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009715

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009715, complete gene.

LocusTag

OSJNBA0091J19.9

Ensembl Transcript ID

BGIOSGA009715-TA

Ensembl Protein ID

BGIOSGA009715-PA

Length

2959

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36557147..36560105

Sequence Coding Region

36559866..36560105,36559196..36559384,36559040..36559093,36558572..36558682,36558384..36558446
,36558061..36558315,36557791..36557937,36557681..36557708,36557531..36557601
,36557296..36557355,36557147..36557215

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36557147..36560105 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36557147..36560105 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCAGGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSRRALGSAFAGFTRTPAMTPTATLPSSCASPARLLRWRRSAGVGARRFASGRNARISMSLRAGIVGLPNVGKSTLFNAIVENGKAQAANFPFCTINPNVGVVAIPDARLHVLSKLSKSKETIPTSIELVDIAGLVKGASKGEGLGNQFLSNIREVDSILQVVRCFEDDDIVHVSGKVDPKSDIDVINLELIFSDLDQIEKRLDKLKKSKTKDQQVKVKEQAERTGLEKIQTVLMDGKPARSVDLADHEKEAIQHLCLLTMKPVIYVANVTESDLAEPGNNPHVKEVAKLATDLESGMVTISAQVEAELAELPLEERVEYLKSLGVTESGLGNLVKATYDLLGLRTYFTTGDKETKAWTILAGMTAPQAAGVIHSDFQKGFIRAETVSYDDFVAAGSLGVAREKGLLRLEGKDYIVQEGDVMLFRFNV</aaseq>

Gene Sequence

<dnaseqindica>1..240#722..910#1013..1066#1424..1534#1660..1722#1791..2045#2169..2315#2398..2425#2505..2575#2751..2810#2891..2959#ATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGTAAGGAACCTTCCCTCTGCTTCTTCCGAAGAATTCCGTGCTGTTATGAACTCGTTTTTAGCTGGAAGCAACTCGAGGAGAAAGAAGGCGATCTTGATTATTTGTGCTTTTGAGGAGTTCTTCTCGATTCATGGATTGGTTTTGGTCGAGGATGAAGTGGGTATGCGGCGTCAATGGAACTGCGCATCAACTGTTTGATTCTTTGCCACACAGAGATGCAGCTCTCCAACGTTTGACTAGTTATGAACTTATGATGCTTAACTTAGATAGGACTCGTCACAGATTTTTTGCACTGAATTTTCATTTCCCTAGCTGCAGGAGTGCTTTTGCAGTCGTGATGATTGTTTGATGGGAAGTATAGTGAATCTTTAACGCATGAAAATGCAACTGCCGTATTGCACGGGACATGCCATTCCTCGCAATAATGTGCATGCTATTGTTGATTACGTTGTAACATGAATTCTTTTGTCAACGTTGTCAGGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGTGTTTCATTAATGACTTCGCTTTATGTTAGGATGTCAATGTGCTGTTCTGGCTGATGTTGTTTCTGAGTTCTGACTAGTTTATATAACCGTGATACATCAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCAGGTCAGTTTCTTGTCGTTTTTATAAATCTTTTGCCATCAGATATTTGTCAAGTTCTGGAGACTTTAACCATGCATTTTTCGCATGCCTCATTCCATTGTTCATCAAGTACTACATATTATTCTGTTGTATTTTTCATATTGCTAAGGATAACTTTATATTATTCTCTGGTAGATGTTTTTTCAATGTTCGTAAAGTACCAATTAAGCTTCTATACAAAATTTGAACACATAATGAGTGTCACTTTGTTTTTCTTGGCACTGCAATTCATTATCGGTATTTTAACTTTCTTGTGCTGTCTTATGTTTTGCCTTTGGGGCCTTTGGGGGTTTTAATCGTTGAGTTTTAAGGCCTTTTCAGGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGGTAATTTTGTAACTGCATTATGTTATCTCCTTGCTTGCTTTGTGGGGTGAAAAAAAAACATGTATGGATTTAATTATGTGCTTTCTTTTTTGCCATTAACGCTGACAATTGTGTTCGAGATGCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGTAAGGTTTTCAGGCTCTTCTCCTTATTTTGATGGTTATTATAGATCCCAACAGTTCTCACTACTCAGGAACAAGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTTGTAATACGCATCTACATGAGTACATCTGAGCATTTGTTTACTTAGACATTGATCGATACTACCTAAACAATATGTTCGCATTGATCTAAGCAAAAATAAATGTGTGGAACACAAATCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGTGAAATTTTGTGTCAAGGGACTACTTCGTTTCCTGGTTTTTGGTATTGCCATTTGATTCCAATTTCCCCCCTCTTTATCAGGAAACAAAAGCTTGGACTATTCTTGCAGGTTTTATTCTTCTTCACAGTGCTGTTCTTTTGTGGCATTTCAATTACTGTATAAACTAAAAGTTTTGACTGTGTGTTAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTAAGTTCCATAATCACAAAGGTTAACTAATGGTTCTAGTAATTGGCTCGATGGAGTTAAGATTTGGCGATATCTGCATCTCTTTAGATGCATTTGATCAAGATATTGCTCACTTCCTAGTATTCTTTTAGATATTCTTTTACTGATTTTTCAATGGTCATTTACCATATCCCAGGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGGTAAAACAATTTTGCAATTTATTATGCAACGAATTCTAGGGCTAGAGATATGTGTTCACCTGTTACCTCTGTCACTGCAGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009715