BGIOSGA009734

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Revision as of 09:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009734| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009734, complete gene.| tag = OsI_137...")
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Gene Name

BGIOSGA009734

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009734, complete gene.

LocusTag

OsI_13708

Ensembl Transcript ID

BGIOSGA009734-TA

Ensembl Protein ID

BGIOSGA009734-PA

Length

8333

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36296792..36305124

Sequence Coding Region

36305022..36305124,36303081..36303250,36302923..36302994,36302201..36302392,36302052..36302111
,36301372..36301682,36298894..36298940,36298762..36298814,36297557..36297595
,36296792..36297079

Genome Context

<gbrowseImage1> name=IndicaChromosome03:36296792..36305124 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:36296792..36305124 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATGAACGCCGACGAGGATGGACGATGCCGGCGACGGACGGGCGTCGGCACGGGCGATGATGGACTGACGACGGCGGCGCCGGGCGGAGAAGACGACGACAAACAAACTACGGGAAGTCTTCAGACCAGTTCTTCTCAAATGGAGAAACACGAGGTGGTGTGCGGAGATAATGCTAGACTTAAAGAAGAAGGAGCAACTGTGGATAATATGGATCCTTCCCGTCCTTTTCTATACCTTGAGAAATTCGATCAGAAAAAGATGGATGAGTGGGTAAAAATTAAATCTGTTTGGGCCGCCAAGAACGTAAAGAACGATATCATGACAGATCCTACTCCTCAGTTGCTCTTCCGCCATGGTGCTTCAGCTAATGTACGCACAGTTGGTAATGCTGGCACTGAGGACCTTCTCCCACTCCATATTGCAGTTGAGAATACTTGCATGCATAAGTATCTGGAGGATAATCTATCTCCTACCCAGTATAATGAGGATTATGTATACAAGCTCATTCATCTGCTGTGCTTACCTGAGATGCCTGTTTTTATTTCAAATTTAGCAGTCATTTATCCTGAAATTCTACTTCCTCAGTTGCAAAAGATTTTCTTGGATACAACTAGACTGCTTGCCGAAAAAACAGATAATCTTGTTGATGAGCTATGGAATTACATGAAGGATGGCAAGCTTGTACAGTCAGCAGTTCTACTCCTGGCAGCTCAAAAACAGTTTCGGAAGGTCAAGCCTGAAGGATTTCATGTTATCGTGCAGCGATTATGCTGTGCTCCCCAAACACGCGAGAAAGGTGATACTGGAGAGGCACAGAAGCAGCTGGAGGAGAAGGGAGCACGTTTTAATTGTTCTTTACAGCTTGTTAGTATAATTTCTCTGGCTGGCGAAGTTCTTGACAACCGCCCTTATGACTGCAAGATTTCTGACAGGGAATTACATTTCAAAGACTCAACCAAGGCAGTTACAGAGATGTCTTCCATGCACTCTGTAGAGGAAAAGCTTACTGATTTACTTGCCTTGTCATGTTGCTTAAGTAAGGCTGTGAGAAAGGGAGCACTTATAGGATGGGATCCAACATACACAAGGAGAAGTTTTCTCCCCTACTGGAGATCTGCATTAGGGCCCCGGGGTCCATCTCAGGAAGCAGTAGAGGTCAAGTCCATAGTGGAGAGCGGACAATATTGGGGTAGTTCAATGATCCCTGGGTCCAATCGTAAGATCTGGTTAATGGACAAAATTCCACAAATACAAAGTAGAAGACGGTCAAGAAGGTACAGTAGTGCAACTGCGTTGAAAATGCTCGTGAAGGTGCTAAAGATTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MTMNADEDGRCRRRTGVGTGDDGLTTAAPGGEDDDKQTTGSLQTSSSQMEKHEVVCGDNARLKEEGATVDNMDPSRPFLYLEKFDQKKMDEWVKIKSVWAAKNVKNDIMTDPTPQLLFRHGASANVRTVGNAGTEDLLPLHIAVENTCMHKYLEDNLSPTQYNEDYVYKLIHLLCLPEMPVFISNLAVIYPEILLPQLQKIFLDTTRLLAEKTDNLVDELWNYMKDGKLVQSAVLLLAAQKQFRKVKPEGFHVIVQRLCCAPQTREKGDTGEAQKQLEEKGARFNCSLQLVSIISLAGEVLDNRPYDCKISDRELHFKDSTKAVTEMSSMHSVEEKLTDLLALSCCLSKAVRKGALIGWDPTYTRRSFLPYWRSALGPRGPSQEAVEVKSIVESGQYWGSSMIPGSNRKIWLMDKIPQIQSRRRSRRYSSATALKMLVKVLKIA</aaseq>

Gene Sequence

<dnaseqindica>1..103#1875..2044#2131..2202#2733..2924#3014..3073#3443..3753#6185..6231#6311..6363#7530..7568#8046..8333#ATGACGATGAACGCCGACGAGGATGGACGATGCCGGCGACGGACGGGCGTCGGCACGGGCGATGATGGACTGACGACGGCGGCGCCGGGCGGAGAAGACGACGGTGCTACGGACAGAAGAGACGGAGTGGCACGGAACGAAGGAAATTCATGCTTCGATGGCGTATTATGAAAGTAGCACGAATTGGGTGGCATATTTTAAAAGTAGTGCGAATTCGATGGCATATTCTGAAAATTCTTAGTTAGAGTGGATGATGTCAAGTTTCAGACTGCTAATATGGATTACGTATTCAGTATTTACGTCTTCGTAGAACTTTGACGGGTACAATACAGAAGCGCTTCTTATCGTTTGATGGCGCCCACATAGGCACATACATATATGTGGGCGGATCCAAGAAGAGAGAAACCCTAGCAGCGCCCTTTCCGAGTTCCGACGCCGCCGACCCCCTTCCACCCCTCTCAGCTCCAGTTTCATCCAGATCTTTCTCTATTGTTTCGTGAAAAAAAAACTTCACCCTTTCATATTTAGAAGATTCATGTCAGAACATGACGGAGGTAAGGAAACAGTATGTGATTTTTCTGTTAATCAGCTATTTCTCCCCCCCCCCCCCCCCTCACCATGGGAGGCTGTAAGGAGTCATTGCCCTCTTTATTTTTTCCTTGAAAATTAGTACTTGTGAACCGCGATGTATCTTTCTAAGGCGAGATCCGGAACCCCTGTTTGTTGCTATTTAAAGGTGGGATCTGTGGCTTCTGGTCATATTCCTCCGACCGGGAGCTATTCTTCATATCAAAATCTAATATTTCGACTGATACCGACCTTAAGGGTTTGTTCGGATCTCCAAGTTCCCAACCTCCCTTGCTTTGTTTTCCGCGCGCACGCTTTTCAAACTGTTAAAACGGTGCGTTTTTTGCAAAAAGTTTCTATACGAAAGTTGTTTAAAAAATTATATTGATCGATTTGTGAAATAAATAGCAAATACTTAATTAATCACACGTGCTAATGGATTGTTCCGTTTTCCGTGCGTACTGTTTTGGGCTGGGAACCGGCATATGCAACACAGCCTAAGTAATTGTCGCACCCCTGTTTTCAGTCTATAGTGTTTTATCTCCACAGCAGGACGTCGAAATGTGTACTCTAGCTGTGTATAGGACCAGTAATGTTTTTATTTTTCCCTACCTCCCTTTGATGTAAAGCATCGAAATCTCTCATAGTCCAGGATCAGAAAGAATAAGTTGTTGACGGGCATCAGTAACCATTAGTAAAGTCTGGCAGGAATCACATGTTCAGCTATCACTTTTTTGCTTTTACTTTGTACATGCATAGGTTTTAGCATTCCCGTACAACTAGTATGTGTGAACTTCCTTTTGCCCCTTAATATCACATTTTACCTTATCCAGATGTGTGATGGAAATTCAATATTTTCTTTTGCAGCGTAATATATATTTTATGTTTCAGCGATGCATGCTTCCTCCAATTCAAAGTATATTTTGTTTTAGGATTCCTACTGGTCAAGCCATTTTAACCCTGGTCATCAGTATATAAAAATTAGAGATTGGCAATGTAAGATAGCTATTACTAGATTCATCATGAAAATTACTTTCATAGTTTAACCATTTTATTTGAAAGACCATATTTTCATAGAATTTGCTAGTCAAAATTTTACCTTGTAGATCATGTCAATGTCCTAAGCATCATATATTTTTTAATCCAAGGGAGTAATCCATTTAGAAATACTCCATTTTGTCTTCGTGGCCAACAGGATCATCGTTCAACCATTTATGAGTCTTACAATATATTAGTAGCAATAGAAAATTGTTGTATGTTTTAATGTATTCCATTTTATAAATAAATCTCCTTGTTCCTTGTTTCAGACAAACAAACTACGGGAAGTCTTCAGACCAGTTCTTCTCAAATGGAGAAACACGAGGTGGTGTGCGGAGATAATGCTAGACTTAAAGAAGAAGGAGCAACTGTGGATAATATGGATCCTTCCCGTCCTTTTCTATACCTTGAGAAATTCGATCAGAAAAAGATGGATGAGGTATGTTGGCTACCCATCTCTGTGATCCTCCTCTTGGCTTCTGTTTTCTTCCCTTATGAACTGGCATTTGACATACTCTCTTCCAGTGGGTAAAAATTAAATCTGTTTGGGCCGCCAAGAACGTAAAGAACGATATCATGACAGATCCTACTCCTCAGGTTTTGTTTCTATTTCACTTACAGAATTCAGTTGACAGATCATTCTGTTATATTAGTTATTTCTTTCTAACCTGCAGCATTTTGGTGTATCTAAGTAGTCCATGTTGAAGCTAAGTGTTCTTTTACTTAATTATAAAGCGCATGCCAGTGAAGCTTGTTTATTATGTTCTGCTTTATCAACTGGAAAAATAACTGGCCTTCTTTTTCATTTGTCAATGGATCGATCTAGTGGGTGCAAAATAACTTCTATTGTTTAACTCCCGACTTGGAACACATCCTGAAAAAGGATAGTACCCGGTGCTTCCGCCGCTTGTTTGCAAACTCTTGGATATTGGCATGGGATTTTACCATTACCTCTGAAACCTTGACCTACATGGTCAGGCATAACGCCCTGCGATGTGCGCCAAGTTGTATTGGAGGGCAAGGCACCTGAGCTCAATTATATGCATGCTAATCCCAATTGCATTAATCCATATGGATGTTTTGCACTCCATGAAGCTGCTGAACGGTTCTTTGTTGACATGATCAAGTTGCTCTTCCGCCATGGTGCTTCAGCTAATGTACGCACAGTTGGTAATGCTGGCACTGAGGACCTTCTCCCACTCCATATTGCAGTTGAGAATACTTGCATGCATAAGTATCTGGAGGATAATCTATCTCCTACCCAGTATAATGAGGATTATGTATACAAGCTCATTCATCTGCTGTGCTTACCTGAGATGGTTTGTTTCACTTTCCTCTCTACACAAAACGTGTGCAGAATGGCATTTTAAATATGTATACCTTTTTGAATTTTTCATATGTGGTGCAGCCTGTTTTTATTTCAAATTTAGCAGTCATTTATCCTGAAATTCTACTTCCTCAGTTGCAAGTAAGGTGTTTTAGTTTTGTCCTTAGTCAAAGTTCTTTAACTTTGACCAAATTTATAGAAAAATAATTAACATCTTCAATACAAAATAAATAAACTATCAAGACATATTTCATAGTGGATTTTAATTGAACTAATTTGATGTTGTTTATGTTGGATCATTTTATAGAAAAAATAACATCTTCAGTTCCAAACAATGTGATGTTACGATATGGGGAGTATTAGCTAAGTAAATTTTATTTGGCTTGAAGATTGGTCCTAATTCATGCCTTGTAATTAGAAGAAACTAGGTGATGTAATATAGGAAGTTATTCAGTGCTGCTTGATAAAGGCAATCTAATTTTGTTCCTTGGCGGCCTTTTTGTTTTGCAGAAGATTTTCTTGGATACAACTAGACTGCTTGCCGAAAAAACAGATAATCTTGTTGATGAGCTATGGAATTACATGAAGGATGGCAAGCTTGTACAGTCAGCAGTTCTACTCCTGGCAGCTCAAAAACAGTTTCGGAAGGTCAAGCCTGAAGGATTTCATGTTATCGTGCAGCGATTATGCTGTGCTCCCCAAACACGCGAGAAAGGTGATACTGGAGAGGCACAGAAGCAGCTGGAGGAGAAGGGAGCACGTTTTAATTGTTCTTTACAGCTTGTTAGTATAATTTCTCTGGCTGGCGAAGTTCTTGACAAGTATATTCAGGCACATTCAGAGGCACCACCTCTTTTTTAATCATTTCGCTGTTTATTTTGATAGTGGTATTTTACTATATACTTTCAAAAATCCATGCTCTAATTTGAGCAAGAAGAATGCATAGTTCTGTTGATTTCCACGCCCTTTCCATATAGTGTGCATGTGGGAGCATAGTCAGCGTAAAGAGATTGGTGTGTCCTGTTTCTGTTAAACCCATGAGAAGAAACTTGCCACTAAAGTGATGTTACTTCTCAAGATTTTTCATGAAGCTTATGACGTCGGAGCCCCCGGTGTTTTGAGAAGCTGGAGCCCCTCGAGTCTTAGGGATGCGGCCTTAGCATGTTGAAAGAATTGACTATCAAATGGTTGAATTGAGATAGGACTGAATTAGTTGTTTGGGGTATGCCATATGTCAAGTAAACCCTGATTTATGTAGCCTGTTATGGTGATATCTACTAATTCATGACAACTAGCTTCTTAAAAAATACTTTCTGGAGGAAGCTCACCCCTTCAACGATGCCTTTAGAGTATTCACATCACGTCACGTGCTGATATGCATTATGATTTAAGAGTGTGGTAATATTACATTTCGTTCAACCTTATTTGATATCATGCCAGCTTTGTTTAATACTTTTGCTGCAACCTTTTTTGTCCTGTTTTTGTTCTAGGAGATCTCCCTAAAACCGATTAACGCTATGTACAGAAATATACAATATATATATTATATATCAGTTTGTTCTTCTTGTCGGTGAGGTACCGAGGTTGCTGCAAACCCTTTCTTTTTCCTCGCTACATACGTGCATTACCACTGCCGAGCTCTACATGGCATTTGCAGGAGCAGGACCCACCACATTGCCGCCTGCTTGTCCTACAGACTCACTGCCAGAGGGGTATTCGCTATTTTAGATCACCCCCATCTTCAGTTCAAGAATTAGGGGGCCTAAATGACACCAACAGGATCTGAGACCACTGATGTATTTTACCCATTACTCTCTCCGTCCCAAAAAAAGCTAATCTAGGTATGGATTTGACATTACCTAGGACAACGAATCTGGACATGCTCGACCTAGGACAAACTTTGACCTAAAACATGCATGCAACAATAGCCAAGGAGAGTAAATACGAAAATGATCTTCATTGCTGCGGGACACTAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTCCTACAGACTCACTGCCAGAGGGGTATTCGCTATTTTAGATCACCCCCATCTTCAGTTCAAGAATTAGGGGGCCTAAATGACACCAACAGGATCTGAGACCACTGATGTATTTTACCCATTACTCTCTCCGTCCCAAAAAAAGCTAATCTAGGTGTGGATTTGACATTACCTAGGACAACGAATCTGGACATGCTCGACCTAGGACAAACTTTGACCTAAAACATGCATGCAACAATAGCAAGGAGAGTAAATACGAAAATGATCTTCATTGCTGCGGGACACTAGATCTTTCTTTTTTGCTGTATAATGCTTGAACGTAGAGCATGTCGAGATTCGTTGTCCTAGGTAATGTCAAATCCATATCTAGGTTGGCTTTTTTTTGGGACGGAGGGAGTATGTTTGTTATATACATTACACTGAATATATGTCTCTTGAGGATGCATTGACTTAAGCGAACACACATAAATTGGATGCTGAGACTTTCACCAGTCCTTTTTTTCTTTTGGTTAAAATGTCTTGAACACTTTTGCCCATGCATTTATATAAAGTTAACTACAGCTACAAAATTGAAATTTGAATAACTAGAAGACTCTTCAATTTGAATATGTTTGTATATGTATTTTATGAAACCAAGCATGCTTGTATTCGCTGTGATTGCGAACTGCTCTATCTCCTTCCATTTCATATGGTATGACTAAAATTTCTCCTCTTGGCCACTCTTTCCGTTATCTCTTTGCCACCATTTCTTATAGGAATTCTTTTTCCTACCCCCATGTGCGCCCTCACAATATGGGGTGTATCTAAGACATCTGTAGCTACACTAGACTGAATTACTGAACAAAAATTCAGTAGCTACACTACTGATGGTGACTACTGATAGTCTGCTACCGAACATAGTTCAGTAGTACAGTGCATTCGGATCAGTAGTTCGCAATCAGTTTTCTTGGTAGTAGTTATATGTGTGTGCGCGCGTGACGTGTGTATGCACCATTTTTCTGTTCCCTTTTCCTTTATCTGATATGATGGTTTAAATGACATTCAGGTGCCCCAGGTGGAGGTCCTTGCACATGTCTCATATGTTCTTAAGGAATTTGGGTTCTGCCATAATGAAATATGCATTGACGTCATAAACCTGTACTACTCTTGCATTTAATTAAATATTTTTTATGGAAATGCATGGTTGTTGATTTAATTATTTCTTCAACTTGTTTTTGAAGCCGCCCTTATGACTGCAAGATTTCTGACAGGGAATTACATTTCAAAGGTATGTGTTGATTTTTTAAGTACTTGTTTCTGAATTTCGCAGAATGTGCCATTGTTACCTTTATTACATGGTTATGTAGACTCAACCAAGGCAGTTACAGAGATGTCTTCCATGCACTCTGTAGAGGAAAAGGTAAATATATTCAAATGCTACCAATAAGTTTCTATTTTTGCTTTTTGTTAGTTTTCCATAGCTCCTTTGTTAATTATTTTGTGCAGCAGCATGTGAGGGATCACATTGTGATAATAGCACACAAGGAGCATTAGCAAGAATACTTATTAGTTTTCTAGATTCCATGTTAGGTTTGTTGTTGTCATCTTACTGGCTTGTGCATATAGGCCACACCATTACCACGTACTCCATTTGTTCCATCTATAAGACGATTAGGGTTTGTCCTTGGTCAAACCTCTTTCAGTTTGATCAAGTTTATAGAGAAAACGTAGTGACATGTACAACACCAACTTTGTTCCGTTAGATCCACCTTTGAATATATTTTTATAGTACATTTGTTCTGTGTTGGAAATGCTGTTACATTTCCTATAACTTTGGTCAACTCAAACTTGAATAAATTTGACTTAGGACAAACTTAAAACGACTTACAATATGGAAAGGAGTAGTTCTCATCTCTGGTCTCTTCTTTTTCCCCCTGTAAGCCATTGCTGCTTGGTGATTTATACAGCAGTGCTTCGCTGTAGACCAAGTAGATAAAATATGATAAACTGGATAAAATATTTATGCTTTAGTATTTGGTGCTTTGGATTGATTTCCCCTCATCTGTTGTGGGCGCATGGTCTTGCAATAAATTTTGGCGTGCAATGTTCTTATTTGGTTGTTCTGATTGTACGCAATGAAATTATGTATGATTAGTCATATTGCAGTGGCATTGTAATAAATAAAACTGCTAGATGTCTGTCATTTTCCTGGATGAAATTGCGGGTACTTGTGATATTCTTGGAGGAAATTGCAGGTACTCGTGAAATTCTTGGAGGAAATTGCGGTGTGATAGTCTTAGGCTCGGTTCGGGAGTGAAGGTTGGAACCCTCACTCCCCGGCACACAAAATGAAGCAACGTTTTAATATGTGATTAATTAAGTTTTAGCTATTTTTTAAAAAAATGGATTAATATGATTTTTTTAAGCAACTTTCGTATAGAAACTTTTTTTTAAAAAATACACCGTTTAGTAGTTTGAAAAGCGTGCACGCGGAAAACGAGGAGGAGTTGGGAACTTCCACGACCGAACGGAGCCTTAGAGGCAACAGCAAAATGATGTTTCACTTGCTATGTTTCTTCCATGCAGCTTACTGATTTACTTGCCTTGTCATGTTGCTTAAGTAAGGTACTTGGGAACACATCACCAATAAATTATAGTTTAGCAGTCTTCTCGTGTACACACCATGCACACCAACTAAAAATACCAAAAACTTTCCTAAAAAAAATATTACCAAAAATTGTATACAAATTTGTACATGTACTTTTAGTAGTACTATATCTGTGTAAAGTATCATCTTGAAATTCATTATATATATAGGGAGCAAAAAAGGACAATTCTGACATATTTATATTCTCAAAATTGTCAGAATTTTTAGGTTAATACTTTACACATAAGTGTAATACTATTGAAAGTATATGTAGAATTTTTGGTGAACTTTGTTAGTTGGTGTGCATGTTGTGTACACAAGCTTGTGTGCGTAGGATATGTTCACATCTTCCATGCAAAATGAAAATAAATTAAATGCTCTCTGGTAGATCATGCTGAATTGTGAATGTTTTGGGTCTTCACACGTGTAAAATCTTTCTCAAACTATTAATACAGGCTGTGAGAAAGGGAGCACTTATAGGATGGGATCCAACATACACAAGGAGAAGTTTTCTCCCCTACTGGAGATCTGCATTAGGGCCCCGGGGTCCATCTCAGGAAGCAGTAGAGGTCAAGTCCATAGTGGAGAGCGGACAATATTGGGGTAGTTCAATGATCCCTGGGTCCAATCGTAAGATCTGGTTAATGGACAAAATTCCACAAATACAAAGTAGAAGACGGTCAAGAAGGTACAGTAGTGCAACTGCGTTGAAAATGCTCGTGAAGGTGCTAAAGATTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009734

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