Os12g0235700

From RiceWiki
Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0235700| Description = Protein kinase domain containing protein| Version = NM_001072990.2 GI:297612905 GeneID:4351846| Length = 8016 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0235700

Description

Protein kinase domain containing protein

Version

NM_001072990.2 GI:297612905 GeneID:4351846

Length

8016 bp

Definition

Oryza sativa Japonica Group Os12g0235700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7418740..7426755

Sequence Coding Region

7425575..7426384

Expression

GEO Profiles:Os12g0235700

Genome Context

<gbrowseImage1> name=NC_008405:7418740..7426755 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7418740..7426755 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgttgactcatgtactcgttgacttttccccaggtcgtccgggtcaaacacccctgtcgtggtcaacgcggctgaagatcgcgaggggcgcggcgcgcggcctcgcgtacctccacgagtgcagcccgcggcggttcgtccacggcgaggtcaagccgtccaacatcctcctcgacgccgacttcaccccgcgcgtcgccgacttcggcctcgcccgcctcctcgccgtcgccggatgcgccgacgacgtcgtcgacgcgcccccggcggcgccgtcgtcgggcggcctgctcggcggcgccataccgtacgcggcgaagccggcgtcgtccgtggcggcggatcaccgcggcggcgggtaccgcgcgcccgaggcgcggacggcgggggcgcggccggcgcagaagtgggacgtgttctcgttcggcgtggtgctgatggagctcctgacggggcgcggccccggcgaccacgcgtcgccgtcgacatcggcgtcgttctcggcgccgtcgtcgtcgtcggcggcgacgacggaccggtcagggagcggcgagcacgggcacggcgccggcgtcggcggcgcagtggtgccggaggtggtgcggtgggtgcggcgcgggttcgaggaggaggcgcggccggtgtcggagatggtggacccggcgctgctccgggacgcgccgccgctgccgaagaaggaggtggtggcggcgttccacctcgcgctcgcctgcaccgagctcgacgccgacctccgccccaggatgaaggccgtcgccgacaccctcgacaagatcgcctcctcatga</cdnaseq>

Protein Sequence

<aaseq>SLTHVLVDFSPGRPGQTPLSWSTRLKIARGAARGLAYLHECSPR RFVHGEVKPSNILLDADFTPRVADFGLARLLAVAGCADDVVDAPPAAPSSGGLLGGAI PYAAKPASSVAADHRGGGYRAPEARTAGARPAQKWDVFSFGVVLMELLTGRGPGDHAS PSTSASFSAPSSSSAATTDRSGSGEHGHGAGVGGAVVPEVVRWVRRGFEEEARPVSEM VDPALLRDAPPLPKKEVVAAFHLALACTELDADLRPRMKAVADTLDKIASS</aaseq>

Gene Sequence

<dnaseqindica>6836..7645#gttactagtgttagtgttagcctctctccctccctctcacacactgttcactaacccaatcactaggcagctcagctcagctcatttcattctgagtctcagctcagctcaagcaaagtaagcaagaagattagaagaagaggaggaaaaattaattggggtgagtttgatgacgacgctacccaccgcgattctactcctcctcctcctcctcgcgctgccgccgccgtccgccgtcgtcgcgctcaccgccgacggcctcgcgctgctggcgctcaaggcggcggtcaccgacgacccgctgtcggtgctgtcgtcgtggtcggagtccgaccccgacccctgccggtggcccggggtgacgtgctccaacgtgacggcggcgggcggcgagccgcggcggcgggtggtcggggtggcgctcgccgggaagaacctgtccgggtacatcccgtcggagctcggctcgctgctgttcctccggcggctgaacctgcacgacaaccggctcgccggcggcgtcccggcggcgctgtcgaacgcgtcgtcgctgcactcgctgttcctctacgggaaccggctcaccggcgccctccccgccgcgctctgcgacatcccgcggctgcagaacctcgacgtgtcgaggaacgcgctgtccggggggctccccggcgacctccggaactgccggagcctgcagcggctcatcctcgccgggaactcgttctccggcgaggtgccggcggggatctgggccgagatggccagcctccagcagctggacatttcgtcgaacgggttcaatggctccatcccggccgacctcggcgagctcccgaggctcgccggcacgctcaacctgtcgcacaaccggttctccggcgtcgtcccgccggagctggggcggctgccggcgaccgtcacgctcgacctccgcttcaacaacctctccggcgccatcccgcagacgggctcgctcgccagccagggcccaacctccttcctcaacaaccccggcctctgcggcttccctctccaggtcccctgccgcgccgtcccgccgccgacgcagtcgccaccggcaccgacgaccacgacgaccacgaccaccccatcgtcggcttccgccgccgccgcggcggcatcggaacaccaccaaccgatcaggaccagcctgatcgccctcatctccatcgccgacgccgccggcgtcgccctcgtcggcgtcatcctagtctacgtctactggaaggtcaaggatcgcaagaaacaaggccgctcctccaccgtcgccgccggtgacgagaacgaaagccgccacgggctctgccgctgcatatggggtcaccggggcgtcgactccgacaccgacaccgacgactcgtcggcgtcggagaacggcggcggcggagggaagtacggcgagggggagctggtggcgatcgacagggggttcagggtggagctggacgagctgctccggtcgtcggcgtacgtgctggggaagggagggaaggggatcgtgtacaaggtggtggtcggcaacggcgcgacgccggtggcggtgcggcggctgggcggcggcggtggaggcggggagcggtgcaaggagttcgcggcggaggcgcgggctgtggggcgggcgcgccaccccaacgtggtgcggctgcgcgcgtactactggtccgccgacgagaagctcgtcgtcaccgacttcgtcggcaacggcaacctcgccgccgcgatgcgtggtaaacactctctctgatgacacttactgctaaactaatttactccgtactactacccctcctttgtttttcttttttttttcaaagtcctttaattttgaaagtttgaaaaaaaaacttaaaaacatctaaaacacaaaattggtttcattaaatacaattttgaatatatttttaatatatgttttgtatggaaatattattgtattttttttctataagtttgattaaacttaaaaaaaagtcaaaacaacttataatataaaacggatagagtattaaacagagcatatcgatggctaacactcttgatggctaacactcttggatattcataagccactccgaaaacttaaattttaaaatttttatgtagtttatttttgagtatttgtttttacgccgataataaaaaaatatgtaaagattttatttatatattattttttaagttgtttatatagtggtaagcgaaactgggggcgtctttaattttagtaagaatcgagaattgttggtttttctcttttttgacaaaattttgtcgagattttgacgttggttttattagattggatggaacattgtcttgcgttagttgttgcatacagtgtacttattttggaacgttgctatcggagtggcatggtagttgcagtaccatgattgatttgcattcgacgagatcacccgagagccaaaacattttgattaggaaaatgtgggtttatctgcctgattagacagtcaaatagtttgtgacactatcaataaaatctaggaacattggcttaggaaaatgtcgccatcacataccctttttatttttttttcttttgtcgattacacacctcacagttcttgataatactactacgtgtatagtagaagtacattagtaactatcaatagtcggttttgttttatgtagcgttctggttgtctactgcgtgctttatttttgttttgttttggagttctttaattgagatgtcgtatactcgtatgtagccacatgtacttaatgcgttctgtttggcagcacgtccgcaggcacagtttgatttgtaaattctgcgaaaactaggagaactaagggcttatttggttagtagtattttcaaatcaaagtaataggaaaagtaaaagattaggatgtcttatgcactctatttcttagaaatttcttcaagaggtctcaccttatactaagaatcctatgaaattagcttgcaagactataatccttaggaatttggtatgatatattcctgtaaaacgaacgatgaatatagaaaaaaaatcctaaggattcaattcttacaataatgcattgaaaatcatcaaagtcgaatgagtcctaacttggtaaatccattaagacttgctaaaatcctagaagtaaaattggataaaaaattccccaatccaagtagggctaagtgtgctgtacaataacagacagcaagcaacttgtaagtcagaaaggagtccgtgcaacggaagcgtgtcaaggagtacaactccagcacagaataatttagtcttacatacatgaaatgaaatggatggatcgatctcatctccaatcatggggaggaattaccaaaaggcaaatgctttcagacaaaatctggagcgagactggtccttggtcctcctacaaggttccaaacaatggcagaagaaaggcacaccggcttgtctccctggctggaccacaccctgcgtccatgggcatatcactcggaagaattgtccttagtcctatccaggcttcgcaaaaccgagggttcgtaaaaccgatgtcagcctctcggctaggtaaaccagtcaaattcaaataatcaaactgaatttcaaattttcaatgaaattcgcctggattttattggttcaattaatggttttgcgtaaacagctattttcgatcagcggacggtttttcgaccttctcatttttggccttcctactattcttgctatgttcttgggaaaattaatggcttttttttcgttgagttaagtggagattcattgagtcaaacagtttgattagtgaaagtaagttaacaccttagacagccaaagtatcgatctcttctgaccttttgaattgcatacaccgtctagtttaaagctaaaagattaatacgatagagaaggatgtacaatttacttataagcttaccatattctcaagaaaattaatggcaaaattattttgtcaagttagttggagattcactgagtcaaacagtttgaccaatgaagtaagttaacaccttagataaatatgaagtaccaacctcttctcatcttctaggtacgttgcacttgcacaccccgttcagtttaaaactgaaagagtaaattgatagagaaggacgggcagtttatttaccgggttgtttggttggaggattgctgctatccattgtagactggacggcgtggtccaattattttggaggaatgaatccatcctccttattaagcttgagaatgtgatatgctttaatgtgtacgatagcatctcgtcgtctacctattgccttatcatttttcaaccaaaatttattttgaattttagaacttaaaattttgagttggttttgaggtgttttctttgtattttattttctggcattgatttttaaacagctaaaaacactaacataaacgtttttatcataaactatttttactgcttagttcatttttccccggcttgtcaaccatagataaaacaattagagattagacagttagaacaatgaattgattttaactccaaaaaatccaatgtgatggaagtagcatgaggagcagctgtaacctgcataaagttggtgcgcatagaccaggaatatactttacttcttctctttgaataaaaaataattatcactaagcatcattcgacaagctaggtgcattaaaatatatggaaccaagtcacacatttatgctctgtagtactgtttcatagcatgagaggggaaaaagagggtgaaagagtacccttctttgtgaaagtttaatgtttagaagaatctttacatcaaatcatatcaagctccaaagttgtctgtcttactgtctttacataagcacaatgctgacaaaccaaagtgaattaaaaggctgagaaatagaaggagcctttccagcccctccagaataaacaggggaagacagacagaaagaccttttcaggcctgaaacctttgtcactgtcatgccctaacagcatgcatctcctggtcactaatctatcattagagactaccattaaagctgtccctgggagccaaaggcaaaaagactaaaaagtgaaaaatgaggtgataattgcataatcagagtgccttttctgttgtgctcaatgacaatgtagaactggctggtgaggctggtgttttggcaggtgttgtggttttaggcttgaaaggacaaaggttgacagcctttaatgatggaagagaaaattaagaaattctctaggagctgctaacaacaaactgtttggtgtctactaatttagttagcatagaaagccagaaaattttcagtatattacacaagtatcaccataaaaaaatatttttatcactatgtgtgtatacatgtcacttcattctatttatctatgtaggagtaacatagaaacaaatgcattgatctaagtgagttgctatctagttttatctggttcaacctaattggcaggaggatttctgctctataaatatataaggcaaaacctcttgcctttccttaaaaaaaaaaaaacctgaatgggagggatcacggttgtagtcatattttttacagttagcgaccagttcctctataatattatctgaaccgtgagaaccacttatatgtgggcctcattttcctccagattcatacaccagagacttttaatactcttgtagagtcgcacaactgcagaggatccacctcctacggttaatggttagtactcttatgtctcctctgtctggggcctgggacatgttgaatccaatcaaacacagtgacaatgggttgcttctgtctggggggaacaagaacagtcaccaggcaggagtgcagtgctgccctgccattgcacttgccactccatcatgtgtctgctgaaagcctgaaacttcaaggcatttcttgatctggtcctgcagacacattgctctgctagttaatcggtcattaaaattctgggcacttagctggagagctaataaacgtgggggcgatccataattccatttccatatgctgcttgaggatttgagtgcacgtgagtattgggatcttattgtgagctaaggctaagctgccgtccggctttgcacatgcgtcgttgcaaattgtatttgggtaatcatgtggctggtagaaaataatgatgattcttgtttagattgttatcctgtttattgtcctagttaaaatttggtgcatgttatattactcttagctgttcatagtattttgtacttgctatgtttttttataacgttggttagttacttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattagatggaggtagtagtattttttttatggggacataagtaacaaatttgctgacctgagaggccatgtgcagttttgtcggcttaaaatcgagtgaaatttctatggaactccttccgtttcatgcaacttatttctagtcaaatatttttatgtttaattaaatttatagaaaaattaaacatctataatacaaaattagtttcttttgtgaacgcaaaaaatacaaaattagtttcattatatctgtattggatatattataataatgtgtttgttttatgttaaaattctactatattttttcaatatcaaatttaaaaaaaattgattagaaaaaagactaatacgacttataatataaaacagatggagtatgttgtatgccactttaatcttctaacacagtagtaaaaaaaaagtgtaaaaaccagtataaaaaaatccccatatgcaaattgatcgttgactcatgtactcgttgacttttccccaggtcgtccgggtcaaacacccctgtcgtggtcaacgcggctgaagatcgcgaggggcgcggcgcgcggcctcgcgtacctccacgagtgcagcccgcggcggttcgtccacggcgaggtcaagccgtccaacatcctcctcgacgccgacttcaccccgcgcgtcgccgacttcggcctcgcccgcctcctcgccgtcgccggatgcgccgacgacgtcgtcgacgcgcccccggcggcgccgtcgtcgggcggcctgctcggcggcgccataccgtacgcggcgaagccggcgtcgtccgtggcggcggatcaccgcggcggcgggtaccgcgcgcccgaggcgcggacggcgggggcgcggccggcgcagaagtgggacgtgttctcgttcggcgtggtgctgatggagctcctgacggggcgcggccccggcgaccacgcgtcgccgtcgacatcggcgtcgttctcggcgccgtcgtcgtcgtcggcggcgacgacggaccggtcagggagcggcgagcacgggcacggcgccggcgtcggcggcgcagtggtgccggaggtggtgcggtgggtgcggcgcgggttcgaggaggaggcgcggccggtgtcggagatggtggacccggcgctgctccgggacgcgccgccgctgccgaagaaggaggtggtggcggcgttccacctcgcgctcgcctgcaccgagctcgacgccgacctccgccccaggatgaaggccgtcgccgacaccctcgacaagatcgcctcctcatgatcgatcgatcgagcgagctaccaaccgatgcagatcagagctccattgcgaaatcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctttcttgcgcaaaatgtgaattgatcatcacaagatcatgcttgtccgagaaatcattttctttctcctttttttgggttcttggaaatatttttccgagctttttttttcttgaaacttgtaagtggtggtttttttgggtggctgctattcttttggatggaattgatcaaatcattttgagatgatatatatatatagggtatataggagggaagtagataatcaagttgtttgttgtaag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0235700, RefSeq:Os12g0235700