Os12g0235800

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0235800| Description = Similar to Argininosuccinate synthase (Fragment)| Version = NM_001072991.1 GI:115487943 GeneID:4351847| Length = 405...")
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Gene Name

Os12g0235800

Description

Similar to Argininosuccinate synthase (Fragment)

Version

NM_001072991.1 GI:115487943 GeneID:4351847

Length

4058 bp

Definition

Oryza sativa Japonica Group Os12g0235800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7429675..7433732

Sequence Coding Region

7429723..7429765,7429887..7429991,7430565..7430727,7430827..7430875,7431234..7431416
,7431855..7431929,7431994..7432179,7432393..7432481,7432923..7433475

Expression

GEO Profiles:Os12g0235800

Genome Context

<gbrowseImage1> name=NC_008405:7429675..7433732 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7429675..7433732 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcacgccctcggctgcggcgccgccaccgcccccgccggggtgggtctcctccaccaccacgagaaggctggggcgttgttcagtgccgcaggctccatcgttcgggttcagcagctcagcgggaaggggagcaaaagccaagctataagatgtgcaatgccaagtgcaagtgagcatggtggaatttcaaccgcaacagctagtagtagtgatcaaaagaaaggtggactgcgtggcaaactgaataaagttgttctagcttacagtggtggtttggatacatcagttattgttccatggctccgggagaactatggttgtgaagttgtctgtttcactgctgatgttggccagggtgacattgaattggaagggctagagaagaaggcaaaagctagtggtgcaagccagcttgttgtgaaggacttgaaagaagagttcgttagtgaatacatttacccctgcttgcgtgctggtgcagtttatgaaagaaagtatctgctggggacttcaatggctaggcctgttattgccaaggcaatggttgatgttgcaaaggaagttggtgcagatgcagttgctcatggatgcactggaaaaggcaatgatcaggttcgttttgagcttacattctatgctttaaaccctgagcttaaagtggtggcaccttggagggagtgggatatcacaggacgtgaagatgctattgagtatgcaaagaaacacaatgtgccaattcctgttacaaagaaatcaatatacagccgtgatcgaaatttgtggcaccttagccatgagggtgacattttggaagatccagcaaatgagccaaaggaagatatgtatatgatgtcagttgcaccagaaaatgcaccttcaaaacctgagtatttggagattggtattattgcaggtgttcctgtttccatcaatggaaaagatctctcaccagcatctctccttgccaagctcaatgaaatcggtggaaagcatggtattgggcgcattgatatggtggaaaaccgcctcgtaggcatgaagtcccgtggtgtatacgagacccccggtggcaccatcatggcagctgctgtccgtgagctcgagtccttgactttggacagggagacaatgcagtggaaggacatgcttgccctcaagtacgccgagctggtctacgctggccgttggttcgacccgctccgacaatccattgatgcgttcatggagaacattaccgcgacaacaaccggctccgtgactctcaagctgtacaagggctccgtaaacgtcgcgtcccggaagagcccatacagcctgtacagggaagacatctcctcatttgagaatggggagatctacaaccaggctgatgctgaagggttcatcaggctatatggtctccctaccagagtccgggcaatgctggagaagggcatctaa</cdnaseq>

Protein Sequence

<aaseq>MAHALGCGAATAPAGVGLLHHHEKAGALFSAAGSIVRVQQLSGK GSKSQAIRCAMPSASEHGGISTATASSSDQKKGGLRGKLNKVVLAYSGGLDTSVIVPW LRENYGCEVVCFTADVGQGDIELEGLEKKAKASGASQLVVKDLKEEFVSEYIYPCLRA GAVYERKYLLGTSMARPVIAKAMVDVAKEVGADAVAHGCTGKGNDQVRFELTFYALNP ELKVVAPWREWDITGREDAIEYAKKHNVPIPVTKKSIYSRDRNLWHLSHEGDILEDPA NEPKEDMYMMSVAPENAPSKPEYLEIGIIAGVPVSINGKDLSPASLLAKLNEIGGKHG IGRIDMVENRLVGMKSRGVYETPGGTIMAAAVRELESLTLDRETMQWKDMLALKYAEL VYAGRWFDPLRQSIDAFMENITATTTGSVTLKLYKGSVNVASRKSPYSLYREDISSFE NGEIYNQADAEGFIRLYGLPTRVRAMLEKGI</aaseq>

Gene Sequence

<dnaseqindica>49..91#213..317#891..1053#1153..1201#1560..1742#2181..2255#2320..2505#2719..2807#3249..3801#gccgccttcccgctccgaacgcccctcccttcgccgccgcccccgaccatggcgcacgccctcggctgcggcgccgccaccgcccccgccggtgagctagatcttcttcttcttcttcttcttttactgtaacgatgtgttgggttttttgtttttactcgttctgattggtttttgcggcggtggatcgatggatggctttggctgtgcaggggtgggtctcctccaccaccacgagaaggctggggcgttgttcagtgccgcaggctccatcgttcgggttcagcagctcagcgggaaggggagcaaaagccaaggtatatgactgttcatgcccttgtggatgatgatgtatcgtctcttgttatgtacctgtatgtgcaatgtaggacatgttattggttacatctgttcgcgctagattaattacttgtgttactaatgtggacctgtttagtacaagcatgtgatctgtgaagctatgctttctggttcgatcagttcttgtgatgtgctaatgagaaaatcaattgatttagagaacctcctctttcttccttggacttaaccacattggttcaaacgctcttaattgcacacacacaaaaagctgttaggacatgactatgaaatcacttatacagccaatttgatgtcctcttgtttggcttaatctagttttacacatctttctgtgagcagttaaaaagagattggttcatcttgtttggtttaatctagtttcaggattgtacatgaacttttatgatagcatactgcttgcaatagggaattttatggcttatgcctatgttaattctgttcatctttgtctatagttgttagcatgttgcgttcaatgaatgataatcctttgtcaaaatgtgcagctataagatgtgcaatgccaagtgcaagtgagcatggtggaatttcaaccgcaacagctagtagtagtgatcaaaagaaaggtggactgcgtggcaaactgaataaagttgttctagcttacagtggtggtttggatacatcagttattgttccatggctccggtatatatattcttcttgttttaataccaatttgtacaatcctatgttctatattaatttgactcatgcaaactatgccatttgcttgtttgattgaagggagaactatggttgtgaagttgtctgtttcactgctgatgttggccaggtatgttgttcattactcgtgtaattatcaagcctgcattattttcttttagtttgtaatgtcatgtgaaccacaacttcctgctgcattaccgaagacgttcataatgtttttctctgcttgctctcaccagtatctctgttacctagtagagtagtactttagttattcttttggctgttacattattttttaccatatgaccttttgctttataaatttcatgatttggggggttcctaggtcttctactggtatatttcttttgttgacaataatcaaacaaagttgcattatagtttgaaactttcttacttcttttcagttaaccataacttcgattcatatacctttgcagggtgacattgaattggaagggctagagaagaaggcaaaagctagtggtgcaagccagcttgttgtgaaggacttgaaagaagagttcgttagtgaatacatttacccctgcttgcgtgctggtgcagtttatgaaagaaagtatctgctggggacttcaatggctaggcctgttattgccaaggtgaatagttgctctatctgtaatcccctagaactttagtaatatatattttccttaaaggtaatattttaaatacatcttttgcccagctttatcaggagcatgctcataagtaacatgagaaacagtgggataaatctatggcaaaagataaatttcctgataactttagtaatagcgttaataaataacactatgctgataacttttcctgggcttctatgggaattgaatggtctcctgtcaaatttctttgttatatgtgagataggatctataaggattgtaggaccctacctttaatatacaattgagtaattatcacaaatggttaataataaaaacatggaaatgatgtgcttgaagtaacatcagaaatattgcaaatcatttatatttgtttattctgtttgaaaacaccatatacctccattgcaggcaatggttgatgttgcaaaggaagttggtgcagatgcagttgctcatggatgcactggaaaaggcaatgatcaggtaaatactgatgttaattagaatattaatatggcagtcatctgatgctaacctttttctgtaggttcgttttgagcttacattctatgctttaaaccctgagcttaaagtggtggcaccttggagggagtgggatatcacaggacgtgaagatgctattgagtatgcaaagaaacacaatgtgccaattcctgttacaaagaaatcaatatacagccgtgatcgaaatttgtggcaccttagccatgaggtatttctgctgtctttttgactcttcattccttcctagtctttctgaagatcttttctatttgatattttcttctacccgtttcttacaattgtttatgttttgcttatgctccaaaccttcaaatcaatgaattacaccatcgtattgatatcatgatcaatcttctgcatctttttgtagttaagtacttacattatgtaaacatttcagggtgacattttggaagatccagcaaatgagccaaaggaagatatgtatatgatgtcagttgcaccagaaaatgcaccttcaaaacctgagtaagcgataatcatgtcttatatgtttggtactttacaagtattctctatgctctttatgcgaagttcttaaattgctgtcatgattcaatatagtatgctttcacgcttaatggtacatggtacgggctatctcaattctcaagggccatacagtcttgaagttcgtagttaagttaggtgggcattgattgaacttctgtgtgagactgtagagtactgactagctaattttcaaggactatctgaagagaatcacaaattcttgctcagataccatagtcattttgttttgcaaattcttgttagctgctacaattttgcgtgtgctgtttttcatcttcttgcttgctaagatatatttttcattcgcccacactagtacacttttttttacttggcccacatctgtagtatctaacctaagcttcatacatccaggtatttggagattggtattattgcaggtgttcctgtttccatcaatggaaaagatctctcaccagcatctctccttgccaagctcaatgaaatcggtggaaagcatggtattgggcgcattgatatggtggaaaaccgcctcgtaggcatgaagtcccgtggtgtatacgagacccccggtggcaccatcatggcagctgctgtccgtgagctcgagtccttgactttggacagggagacaatgcagtggaaggacatgcttgccctcaagtacgccgagctggtctacgctggccgttggttcgacccgctccgacaatccattgatgcgttcatggagaacattaccgcgacaacaaccggctccgtgactctcaagctgtacaagggctccgtaaacgtcgcgtcccggaagagcccatacagcctgtacagggaagacatctcctcatttgagaatggggagatctacaaccaggctgatgctgaagggttcatcaggctatatggtctccctaccagagtccgggcaatgctggagaagggcatctaagcccctgttttctgcttaaaatgtacttctgtgctttggagaaaatgtagcaccacctcatgcagtgttgcctgcaggtaggcactgaatactttccgagttgtattagcgttcgaaagcttaactgccatctcaattcgattacaactttcgtgaagtgttgcatgatcatgtaatgaataatggggttgtacctgattttgacttggttgtctaaattgcaataagattgtctcatgtggtgccgtcgttgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0235800, RefSeq:Os12g0235800