BGIOSGA009778

From RiceWiki
Revision as of 09:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009778| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009778, complete gene.| tag = OS03G07...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009778

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009778, complete gene.

LocusTag

OS03G0759000

Ensembl Transcript ID

BGIOSGA009778-TA

Ensembl Protein ID

BGIOSGA009778-PA

Length

2414

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35597895..35600308

Sequence Coding Region

35600041..35600308,35599845..35599943,35599376..35599735,35599089..35599224,35598843..35599005
,35598624..35598749,35598343..35598537,35598093..35598215,35597895..35598008

Genome Context

<gbrowseImage1> name=IndicaChromosome03:35597895..35600308 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:35597895..35600308 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCTTGCGTGTCGACGACGAGGCGGCGGCGGAGGTCGAGGAAGCTGTCGGTGGCGGCGAGGAAGTTCCGCCGGAAGGTGTCCGCGGCGATCGCCGACGCGCCCATCGCCCGCTCCGGCGGCGGCGGCGGCGCCGGCGGCGAGGTGGCGGCGGCGAACTGCTTCGCGCGCCACGAGGTCGTCCACGTCGAGGCGCCCGTGTCCAACGTGACGCTTCACCTCACGCAGCTGCAGTGGCAGCACAGCCAGATGGACGCAGGCAGTGTGATCTGTGAAGAAGCGTGGTACGACTCCGTCAGCATCCTCGACTCGGCCGACTCCGAAGACGACGATCTCGACAACGACTTCGCCAGCGTCAGTGGAGATCCTCTCCCGGATGTCACCGCGACGGCGACGTCGACGTCGACGAGCTTGCTCGACGCCGTGCATCGCCTGAGGAGCATCGCGAGCGCAGAGGCATGCCAGGATGATGATCCTCCCGGGAAAGCTGAAGAATCAAACGCTGCTGCTGCTGCTGACGAGTGCTGCAGCAGCAGCGGCGGTGGCCTGAAGGAATCGGCGGCGAGCTCGACGCGGCCGCCATTCCCGCCGTCGATTCCGAGCAACAAGATCCAGCCGATGCCGATCGTCAGCGTCAGCCCGCACAGCCAGAAGAAGAAATCCGCCGTCGTCAGGCTCTCCTTCAGGAGGAGATCATACGAGGGTGACGAGATGACTGAAATGAGTGGCTCTACGAACTATCTGTACCGTCCAAGAGCCGGTTCATCGTTGCCGTGCTCGACCGGCGAAAAACTGTCAGATGGTTGTTGGTCAGCTATTGAGCCGTCAGTGTTCAGAGTCCGAGGGGAGAGTTTCTTCAAAGACAAGAGGAAATCCCCAGCTCCGAACTGCTCACCATACATCCCAATTGGAGCAGACATGTTTGCCTGCACAAGGAAGATAAATCACATTGCGCAGCATCTCGCTCTTCCATCTCTGAAGGCTCATGAGACCTTCCCATCACTCCTCATTGTGAACATTCAGATGCCTACCTATCCAGCAACCGTGTTTGGCGAGAACGACGGCGATGGGATAAGCCTAGTTCTTTATTTCAAGCTATCTGACAGTTTTGACAAGGAAATTTCTCCTCAACTAAAAGAAAGCATCAAGAAGCTTATGGGTGATGAAATGGAGAGAGTTAAGGGGTTTCCGGTAGACAGCAATGTGCCCTACACTGAGAGGCTGAAAATTCTGGCTGGTTTGGTGAACCCTGACGACTTACAGCTCAGTGCAGCTGAGAGGAAGCTTGTGCAAACCTACAACCAGAAACCGGTGCTGTCTCGCCCCCAGCACAAATTCTTCAAGGGGCCAAACTACTTCGAGATCGATCTCGATGTCCACCGTTTCAGCTTCATTTCAAGGAAAGGGCTTGAGGCCTTCAGGGAACGATTGAAACATGGAGTTCTTGATCTTGGCCTGACCATTCAGGCACAGAAGGCAGAGGAGCTACCTGAGCATGTCTTGTGCTGCATGAGGCTGAATAAGATCGACTTTGCCGACAGCGGGCAAATACCAACATTGATAATGTCCAGTGACGAATAA</cdnaseq>

Protein Sequence

<aaseq>MGSCVSTTRRRRRSRKLSVAARKFRRKVSAAIADAPIARSGGGGGAGGEVAAANCFARHEVVHVEAPVSNVTLHLTQLQWQHSQMDAGSVICEEAWYDSVSILDSADSEDDDLDNDFASVSGDPLPDVTATATSTSTSLLDAVHRLRSIASAEACQDDDPPGKAEESNAAAAADECCSSSGGGLKESAASSTRPPFPPSIPSNKIQPMPIVSVSPHSQKKKSAVVRLSFRRRSYEGDEMTEMSGSTNYLYRPRAGSSLPCSTGEKLSDGCWSAIEPSVFRVRGESFFKDKRKSPAPNCSPYIPIGADMFACTRKINHIAQHLALPSLKAHETFPSLLIVNIQMPTYPATVFGENDGDGISLVLYFKLSDSFDKEISPQLKESIKKLMGDEMERVKGFPVDSNVPYTERLKILAGLVNPDDLQLSAAERKLVQTYNQKPVLSRPQHKFFKGPNYFEIDLDVHRFSFISRKGLEAFRERLKHGVLDLGLTIQAQKAEELPEHVLCCMRLNKIDFADSGQIPTLIMSSDE</aaseq>

Gene Sequence

<dnaseqindica>1..268#366..464#574..933#1085..1220#1304..1466#1560..1685#1772..1966#2094..2216#2301..2414#ATGGGTTCTTGCGTGTCGACGACGAGGCGGCGGCGGAGGTCGAGGAAGCTGTCGGTGGCGGCGAGGAAGTTCCGCCGGAAGGTGTCCGCGGCGATCGCCGACGCGCCCATCGCCCGCTCCGGCGGCGGCGGCGGCGCCGGCGGCGAGGTGGCGGCGGCGAACTGCTTCGCGCGCCACGAGGTCGTCCACGTCGAGGCGCCCGTGTCCAACGTGACGCTTCACCTCACGCAGCTGCAGTGGCAGCACAGCCAGATGGACGCAGGCAGTGGTAAAACAATAGCATACAAATTTTCTGAAACTTTTTTAAAATCTTCCTGGTTATGAAATTTCTCAAATCTCTGAAACTTTTTTTTTGGTCGAACCAGTGATCTGTGAAGAAGCGTGGTACGACTCCGTCAGCATCCTCGACTCGGCCGACTCCGAAGACGACGATCTCGACAACGACTTCGCCAGCGTCAGTGGAGGTAAAATGTTTTTCTTCAGACACTGTCAAAAATGTCAAGTAATTCAGTGTAGTTTCAGAGTTTTTTCAGACAGCTCAAAAGCTTTTTCACGTCTCGTATTCCAACCCAGATCCTCTCCCGGATGTCACCGCGACGGCGACGTCGACGTCGACGAGCTTGCTCGACGCCGTGCATCGCCTGAGGAGCATCGCGAGCGCAGAGGCATGCCAGGATGATGATCCTCCCGGGAAAGCTGAAGAATCAAACGCTGCTGCTGCTGCTGACGAGTGCTGCAGCAGCAGCGGCGGTGGCCTGAAGGAATCGGCGGCGAGCTCGACGCGGCCGCCATTCCCGCCGTCGATTCCGAGCAACAAGATCCAGCCGATGCCGATCGTCAGCGTCAGCCCGCACAGCCAGAAGAAGAAATCCGCCGTCGTCAGGCTCTCCTTCAGGAGGAGATCATACGAGGGTGACGAGATGACTGAAATGAGTGAGTCTTAGCATCAGCAATTCAGCACTAATTTTTCTTTTCTATCTTCAAAAAAAGCATCAGCAATTCAGCACTCAGCTTGCTAATCTTGCAGCGTGTTGATGTGCGCGATCAATCTTTCTTCACTTTGCTGACAAATTTAACAATGCAGGTGGCTCTACGAACTATCTGTACCGTCCAAGAGCCGGTTCATCGTTGCCGTGCTCGACCGGCGAAAAACTGTCAGATGGTTGTTGGTCAGCTATTGAGCCGTCAGTGTTCAGAGTCCGAGGGGAGAGTTTCTTCAAGTAAGAAGCAATTGCATCGATAAACACACATTGTGCATGATGTTCATCAGTATCCTTGACTGAATTCTTGAAATGCTTTGCAGAGACAAGAGGAAATCCCCAGCTCCGAACTGCTCACCATACATCCCAATTGGAGCAGACATGTTTGCCTGCACAAGGAAGATAAATCACATTGCGCAGCATCTCGCTCTTCCATCTCTGAAGGCTCATGAGACCTTCCCATCACTCCTCATTGTGAACATTCAGGTAAATTCAGAAGGACTCAACTACTGCTTTTTCTAACATCTATTAATTTCTTTGGTCATCTCTGAACCTAACAACTTCTACTGATTTCCACAGATGCCTACCTATCCAGCAACCGTGTTTGGCGAGAACGACGGCGATGGGATAAGCCTAGTTCTTTATTTCAAGCTATCTGACAGTTTTGACAAGGAAATTTCTCCTCAACTAAAAGAAAGCATCAAGGTATGTTCAGATTGCTTGCATTTTCATCTCACCCTTTTTCAGTGCCCCTTGGCCAAATTGCTGATGGCTACTTGGTTGTACTACAGAAGCTTATGGGTGATGAAATGGAGAGAGTTAAGGGGTTTCCGGTAGACAGCAATGTGCCCTACACTGAGAGGCTGAAAATTCTGGCTGGTTTGGTGAACCCTGACGACTTACAGCTCAGTGCAGCTGAGAGGAAGCTTGTGCAAACCTACAACCAGAAACCGGTGCTGTCTCGCCCCCAGCACAAATTCTTCAAGGTAATAGCAATCTGCATCTTCAGACTTGATCCCATCTATACATCAATTGATTACACATGCTGAAATCTTCATGTTCTACGACTACGAATTCTGACTGAAAGATCAATATATGTTCATTGTAATGCAGGGGCCAAACTACTTCGAGATCGATCTCGATGTCCACCGTTTCAGCTTCATTTCAAGGAAAGGGCTTGAGGCCTTCAGGGAACGATTGAAACATGGAGTTCTTGATCTTGGCCTGACCATTCAGGTACTTTTCTTTTGCTCTTGGCCTGAAAGAAAAACTTGTTCTTGACTGAAATTCTGACTCAAGCATGTTCTGATCTTGATGCAGGCACAGAAGGCAGAGGAGCTACCTGAGCATGTCTTGTGCTGCATGAGGCTGAATAAGATCGACTTTGCCGACAGCGGGCAAATACCAACATTGATAATGTCCAGTGACGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009778