BGIOSGA009787

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Revision as of 09:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009787| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009787, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009787

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009787, complete gene.

LocusTag

OSJNBB0081K01.8

Ensembl Transcript ID

BGIOSGA009787-TA

Ensembl Protein ID

BGIOSGA009787-PA

Length

3774

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35406724..35410497

Sequence Coding Region

35407491..35410497,35406724..35406749

Genome Context

<gbrowseImage1> name=IndicaChromosome03:35406724..35410497 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:35406724..35410497 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGGCTCGCCGGAGCGCGGCCTCCTCCTCCTTCTTCCTCCTCCTGCTGGTGCTCGCCGTCCGCGTCCGCGCCTCTTCCGACCGTGTCCAAGAACGGGACAGATCGGCGCTCCTCGAGCTCCGGGGCGCCGCCGGGCTGCTGGGGCGGTGGCCGACGGGCTCCGCCGTCGCTGACCACTGCTCCTGGCCCGGGGTGACCTGCGATGCGAGTCGCCGGGTCGTCGCCGTCGCCGTCGCCGCGCCCCCTGCCTCGGGGAGCTCGGAGCTCGCCGGCGAGCTTTCCCCGGCGGTGGGGCTCCTCACCGAGCTGAGGGAGCTCTCCTTACCCTCGCGCGGCCTTCGCGGCGAGATCCCCGCGGAGATCTGGAGGCTGGAGAAGCTCGAGGTGGTCAACCTCGCGGGGAACTCCCTCCATGGCGCGCTTCCTCTCGCCTTCCCGCCGCGGATGAGGGTGCTTGACCTCGCCTCCAACCGTCTGCATGGTGAGATTCAGGGCACTCTCTCGGACTGCAAGAGCTTGATGAGGTTGAACCTTTCCGGCAACCGCCTCACCGGCTCGGTGCCGGGTGTTCTTGGCAGCTTGCCCAAGTTGAAGCTGCTTGACTTGTCCCGGAACCTTCTTACCGGAAGAATTCCCTCAGAATTGGGGGATTGTCGGGAGCTCCGCTCCCTGCAGCTGTTCTCCAATTTGCTGGAAGGTTCAATTCCACCAGAGATTGGAAGGTTGAGGAGGTTGCAGGTTTTGGACATATCGAGTAACCGATTGAACGGTCCGGTTCCAATGGAACTAGGGAATTGCATGGATTTGTCGGTACTCGTATTGACGAGCCAGTTTGATGCTGTGAATTTATCTGAGTTCAATATGTTTATAGGAGGAATTCCGGAAAGTGTGACAGCTTTGCCAAAGCTTCGGATGCTATGGGCGCCAAGGGCAGGTTTTGAAGGGAACATTCCAAGCAATTGGGGAAGGTGTCATAGTTTGGAAATGGTTAACCTTGCGGAGAACTTACTCTCTGGAGTGATTCCAAGGGAGCTAGGGCAGTGCAGTAACCTCAAGTTTCTCAACCTCAGCTCGAATAAATTGTCCGGTTCTATTGATAACGGTCTTTGTCCGCATTGTATTGCTGTTTTTGATGTCAGCAGAAATGAACTATCCGGCACAATTCCAGCATGTGCTAACAAAGGTTGCACACCCCAGCTTTTGGATGACATGCCATCTCGTTATCCGTCATTCTTCATGTCCAAAGCTCTAGCACAGCCATCATCGGGGTATTGCAAATCAGGAAATTGTTCTGTTGTATACCATAATTTTGCAAATAACAATCTTGGAGGCCACCTTACATCATTGCCATTTAGTGCAGACCGATTTGGGAACAAGATATTGTATGCTTTTCATGTTGATTACAATAACTTCACAGGATCTTTGCATGAAATTTTGCTGGCACAGTGTAATAATGTGGAGGGGTTGATTGTCAGTTTCCGGGACAACAAGATATCTGGTGGGCTCACAGAAGAAATGAGTACAAAATGCAGTGCTATCAGAGCATTGGATCTTGCTGGCAATCGAATAACAGGAGTGATGCCTGGTAACATTGGTTTGTTGAGTGCTCTTGTCAAGATGGACATCAGTAGGAATTTGCTTGAGGGTCAAATTCCTTCCAGTTTCAAAGAGCTTAAGAGCTTGAAATTTCTGTCATTAGCTGAGAATAATCTCAGTGGCACCATACCATCCTGTTTGGGTAAGTTGAGATCACTGGAGGTTTTGGATCTCTCGTCTAACTCCCTATCTGGAAAGATCCCTAGGAATCTTGTGACACTGACATATCTTACTTCACTTTTGCTGAACAATAATAAGCTTTCCGGAAACATTCCTGATATTGCCCCATCAGCATCACTATCCATTTTTAACATTTCATTCAATAACTTGTCTGGCCCATTGCCTTTGAATATGCACTCATTGGCATGCAACAGTATTCAGGGAAATCCATCCCTCCAGCCTTGTGGGTTGTCTACACTTGCAAATACAGTAATGAAGGCCCGATCACTCGCAGAAGGAGATGTTCCACCATCAGATAGTGCAACTGTTGATAGTGGTGGCGGCTTCAGCAAAATAGAGATTGCCTCAATTACATCAGCATCAGCTATTGTTGCAGTTCTCTTGGCTCTGATTATCCTATATATTTACACACGGAAATGTGCATCAAGACAGTCAAGACGTTCAATCAGGAGAAGGGAAGTGACTGTTTTTGTGGATATTGGTGCTCCATTGACGTATGAGACTGTTGTACGTGCTACGGGGAGTTTTAATGCAAGCAATTGTATTGGAAGTGGTGGCTTTGGAGCAACATACAAAGCTGAGATTGCACCTGGAGTTCTGGTGGCGATAAAGAGGCTTGCGATTGGAAGGTTCCAAGGTATTCAGCAATTCCAAGCAGAGGTAAAAACTCTTGGGAGGTGCCGCCATCCCAATCTTGTGACACTCATAGGATACCATCTCAGTGATTCAGAGATGTTTCTTATATATAATTTTCTTCCTGGTGGTAATTTGGAAAGATTTATACAAGAAAGGGCTAAGAGACCTATTGACTGGAGAATGCTTCACAAAATTGCTCTAGATATTGCACGTGCACTTGGATTCCTTCATGATAGCTGTGTCCCACGCATTCTGCACCGAGACGTGAAACCAAGCAACATTTTACTTGATAATGAATACAATGCATACCTTTCTGATTTTGGATTAGCAAGACTACTCGGGAATTCAGAAACACACGCAACAACTGGTGTAGCAGGTACTTTTGGATATGTTGCTCCAGAGTATGCCATGACATGTCGTGTTTCTGATAAGGCAGATGTGTACAGCTATGGAGTTGTACTTCTTGAGCTTATTTCAGACAAGAAAGCACTGGACCCTTCTTTTTCTCCATATGGAAATGGCTTCAACATTGTTGCCTGGGCTTGCATGCTTCTGCAGAAGGGTCGAGCCCGTGAGTTCTTCATAGAAGGAAGCAATGGAACATCAGAGGGATGA</cdnaseq>

Protein Sequence

<aaseq>MVAARRSAASSSFFLLLLVLAVRVRASSDRVQERDRSALLELRGAAGLLGRWPTGSAVADHCSWPGVTCDASRRVVAVAVAAPPASGSSELAGELSPAVGLLTELRELSLPSRGLRGEIPAEIWRLEKLEVVNLAGNSLHGALPLAFPPRMRVLDLASNRLHGEIQGTLSDCKSLMRLNLSGNRLTGSVPGVLGSLPKLKLLDLSRNLLTGRIPSELGDCRELRSLQLFSNLLEGSIPPEIGRLRRLQVLDISSNRLNGPVPMELGNCMDLSVLVLTSQFDAVNLSEFNMFIGGIPESVTALPKLRMLWAPRAGFEGNIPSNWGRCHSLEMVNLAENLLSGVIPRELGQCSNLKFLNLSSNKLSGSIDNGLCPHCIAVFDVSRNELSGTIPACANKGCTPQLLDDMPSRYPSFFMSKALAQPSSGYCKSGNCSVVYHNFANNNLGGHLTSLPFSADRFGNKILYAFHVDYNNFTGSLHEILLAQCNNVEGLIVSFRDNKISGGLTEEMSTKCSAIRALDLAGNRITGVMPGNIGLLSALVKMDISRNLLEGQIPSSFKELKSLKFLSLAENNLSGTIPSCLGKLRSLEVLDLSSNSLSGKIPRNLVTLTYLTSLLLNNNKLSGNIPDIAPSASLSIFNISFNNLSGPLPLNMHSLACNSIQGNPSLQPCGLSTLANTVMKARSLAEGDVPPSDSATVDSGGGFSKIEIASITSASAIVAVLLALIILYIYTRKCASRQSRRSIRRREVTVFVDIGAPLTYETVVRATGSFNASNCIGSGGFGATYKAEIAPGVLVAIKRLAIGRFQGIQQFQAEVKTLGRCRHPNLVTLIGYHLSDSEMFLIYNFLPGGNLERFIQERAKRPIDWRMLHKIALDIARALGFLHDSCVPRILHRDVKPSNILLDNEYNAYLSDFGLARLLGNSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELISDKKALDPSFSPYGNGFNIVAWACMLLQKGRAREFFIEGSNGTSEG</aaseq>

Gene Sequence

<dnaseqindica>1..3007#3749..3774#ATGGTGGCGGCTCGCCGGAGCGCGGCCTCCTCCTCCTTCTTCCTCCTCCTGCTGGTGCTCGCCGTCCGCGTCCGCGCCTCTTCCGACCGTGTCCAAGAACGGGACAGATCGGCGCTCCTCGAGCTCCGGGGCGCCGCCGGGCTGCTGGGGCGGTGGCCGACGGGCTCCGCCGTCGCTGACCACTGCTCCTGGCCCGGGGTGACCTGCGATGCGAGTCGCCGGGTCGTCGCCGTCGCCGTCGCCGCGCCCCCTGCCTCGGGGAGCTCGGAGCTCGCCGGCGAGCTTTCCCCGGCGGTGGGGCTCCTCACCGAGCTGAGGGAGCTCTCCTTACCCTCGCGCGGCCTTCGCGGCGAGATCCCCGCGGAGATCTGGAGGCTGGAGAAGCTCGAGGTGGTCAACCTCGCGGGGAACTCCCTCCATGGCGCGCTTCCTCTCGCCTTCCCGCCGCGGATGAGGGTGCTTGACCTCGCCTCCAACCGTCTGCATGGTGAGATTCAGGGCACTCTCTCGGACTGCAAGAGCTTGATGAGGTTGAACCTTTCCGGCAACCGCCTCACCGGCTCGGTGCCGGGTGTTCTTGGCAGCTTGCCCAAGTTGAAGCTGCTTGACTTGTCCCGGAACCTTCTTACCGGAAGAATTCCCTCAGAATTGGGGGATTGTCGGGAGCTCCGCTCCCTGCAGCTGTTCTCCAATTTGCTGGAAGGTTCAATTCCACCAGAGATTGGAAGGTTGAGGAGGTTGCAGGTTTTGGACATATCGAGTAACCGATTGAACGGTCCGGTTCCAATGGAACTAGGGAATTGCATGGATTTGTCGGTACTCGTATTGACGAGCCAGTTTGATGCTGTGAATTTATCTGAGTTCAATATGTTTATAGGAGGAATTCCGGAAAGTGTGACAGCTTTGCCAAAGCTTCGGATGCTATGGGCGCCAAGGGCAGGTTTTGAAGGGAACATTCCAAGCAATTGGGGAAGGTGTCATAGTTTGGAAATGGTTAACCTTGCGGAGAACTTACTCTCTGGAGTGATTCCAAGGGAGCTAGGGCAGTGCAGTAACCTCAAGTTTCTCAACCTCAGCTCGAATAAATTGTCCGGTTCTATTGATAACGGTCTTTGTCCGCATTGTATTGCTGTTTTTGATGTCAGCAGAAATGAACTATCCGGCACAATTCCAGCATGTGCTAACAAAGGTTGCACACCCCAGCTTTTGGATGACATGCCATCTCGTTATCCGTCATTCTTCATGTCCAAAGCTCTAGCACAGCCATCATCGGGGTATTGCAAATCAGGAAATTGTTCTGTTGTATACCATAATTTTGCAAATAACAATCTTGGAGGCCACCTTACATCATTGCCATTTAGTGCAGACCGATTTGGGAACAAGATATTGTATGCTTTTCATGTTGATTACAATAACTTCACAGGATCTTTGCATGAAATTTTGCTGGCACAGTGTAATAATGTGGAGGGGTTGATTGTCAGTTTCCGGGACAACAAGATATCTGGTGGGCTCACAGAAGAAATGAGTACAAAATGCAGTGCTATCAGAGCATTGGATCTTGCTGGCAATCGAATAACAGGAGTGATGCCTGGTAACATTGGTTTGTTGAGTGCTCTTGTCAAGATGGACATCAGTAGGAATTTGCTTGAGGGTCAAATTCCTTCCAGTTTCAAAGAGCTTAAGAGCTTGAAATTTCTGTCATTAGCTGAGAATAATCTCAGTGGCACCATACCATCCTGTTTGGGTAAGTTGAGATCACTGGAGGTTTTGGATCTCTCGTCTAACTCCCTATCTGGAAAGATCCCTAGGAATCTTGTGACACTGACATATCTTACTTCACTTTTGCTGAACAATAATAAGCTTTCCGGAAACATTCCTGATATTGCCCCATCAGCATCACTATCCATTTTTAACATTTCATTCAATAACTTGTCTGGCCCATTGCCTTTGAATATGCACTCATTGGCATGCAACAGTATTCAGGGAAATCCATCCCTCCAGCCTTGTGGGTTGTCTACACTTGCAAATACAGTAATGAAGGCCCGATCACTCGCAGAAGGAGATGTTCCACCATCAGATAGTGCAACTGTTGATAGTGGTGGCGGCTTCAGCAAAATAGAGATTGCCTCAATTACATCAGCATCAGCTATTGTTGCAGTTCTCTTGGCTCTGATTATCCTATATATTTACACACGGAAATGTGCATCAAGACAGTCAAGACGTTCAATCAGGAGAAGGGAAGTGACTGTTTTTGTGGATATTGGTGCTCCATTGACGTATGAGACTGTTGTACGTGCTACGGGGAGTTTTAATGCAAGCAATTGTATTGGAAGTGGTGGCTTTGGAGCAACATACAAAGCTGAGATTGCACCTGGAGTTCTGGTGGCGATAAAGAGGCTTGCGATTGGAAGGTTCCAAGGTATTCAGCAATTCCAAGCAGAGGTAAAAACTCTTGGGAGGTGCCGCCATCCCAATCTTGTGACACTCATAGGATACCATCTCAGTGATTCAGAGATGTTTCTTATATATAATTTTCTTCCTGGTGGTAATTTGGAAAGATTTATACAAGAAAGGGCTAAGAGACCTATTGACTGGAGAATGCTTCACAAAATTGCTCTAGATATTGCACGTGCACTTGGATTCCTTCATGATAGCTGTGTCCCACGCATTCTGCACCGAGACGTGAAACCAAGCAACATTTTACTTGATAATGAATACAATGCATACCTTTCTGATTTTGGATTAGCAAGACTACTCGGGAATTCAGAAACACACGCAACAACTGGTGTAGCAGGTACTTTTGGATATGTTGCTCCAGAGTATGCCATGACATGTCGTGTTTCTGATAAGGCAGATGTGTACAGCTATGGAGTTGTACTTCTTGAGCTTATTTCAGACAAGAAAGCACTGGACCCTTCTTTTTCTCCATATGGAAATGGCTTCAACATTGTTGCCTGGGCTTGCATGCTTCTGCAGAAGGGTCGAGCCCGTGAGTTCTTCATAGAAGGTCTGTGGGATGTGGCCCCACATGATGACTTAGTTGAGATTCTTCACCTCGGTATCAAGTGTACCGTCGACTCTCTTTCATCCAGGCCCACAATGAAGCAAGTTGTTCGACGACTAAAGGAACTCAGACCGCCTTCTTACTAGGAATAGCAATTCAAGGTTGATCCGATGTTTACAAACTGATATAGGTACAATGAGCCAACTTTCCATATCTGCTAATTTTGCTGCACTTTTTTTTACCAAACTTTGATTGGTACATTTGTAGTGTAACCATTTTTTTTCCGCATGTGATTGTGTTTAAGAATCATGAAAACATAGGTTCAACACAAGTGTCCCCATGTGATATCCGTGTTCATTTTAGAGAGCATATTTTTAATATATCTGGTTCCTACTCTAATTAAATTGTCCTGTCAACTTATACTATACCTACAATTCTGTAAAACTGTACGATAGCTTTCCGGTATAATTATTTTGTGCATTATGAAGACATGAAATTTCTGTGGAAGCCTGGATCACCAACGAGTTTCAGTCATCTGTATCTTTCGTCAACCAATATTGACTTATCGATACTCCAAGAAGCTTAGTGGGTAGCAGAAACATGTGCTTGTTCCCTCATGTGAGGTTGATATGTTAAAACATGTGCTTGTTCTTTCTTCAAATCACTGCTGATTCATTTTATGGCCATTTATTATGAAATTGTGCATTATTCTTGGATATATTATTGATGTAATTTTATCTGCAGGAAGCAATGGAACATCAGAGGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009787