BGIOSGA009789

From RiceWiki
Revision as of 09:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009789| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009789, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009789

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009789, complete gene.

LocusTag

OSJNBB0081K01.11

Ensembl Transcript ID

BGIOSGA009789-TA

Ensembl Protein ID

BGIOSGA009789-PA

Length

2293

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35381449..35383741

Sequence Coding Region

35383615..35383741,35382357..35383321,35381721..35381906,35381572..35381632,35381449..35381492

Genome Context

<gbrowseImage1> name=IndicaChromosome03:35381449..35383741 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:35381449..35383741 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATGCTCCAGGGCGGCGGCGGCGCCGCCTCGTCGTCGTCGTCGAAGCGGCGGAACCAGCAGCGCAGGCAGCGGCGGAAGCGCGCCGCCGCGGGGAAGAAGCAGGGAGGATCCCCTGCCTCAGAAAATAATGGAGAGGAGCATGCTGATGCTCAAGGATGCTTACCTGACATCTCTACTAGCAAGTCTGAAAATTACAAGGAACGTGCCTTTTCAACTCAAGGAGATTTGCCCCAGAAAGCAGGTTGTGATTTGGAAGCAAATTTGTGCGCAGAATCAGTGCAAAGTTCGTCCAGTCAGTTGGTGCATTCAAATGAGAATAGCAATCCAAAGCGTCCAGAAGTGAAGAATGCTAACTCAGCAGGGAATTCAGAACATTGCATGCTCGACACCAGGAAAACTACAGATCATGATACATCTTCCATGCCACTTCAAGATTCTAGGTTTGATGCAAATGTCAGGATCGACGGCCTACACTCCACAACTGAAGAGAGAGTTTGTCAAAGCACAGTCGGTGATGGTTTTACCGGCATGTCAAATGCTAGTTACAACCCTTACAGTGTACAGGAGAACCAGAGGATAGGACCTTTTATGAGAGAACCTTATACCCTGCACAGCCATTTTCTGCATCCATCACATGTTAGGGGTTACATAGGCAACAAGTTTATGGGTTTTCCTCCTGTACACCCAATGAATGCATTCGATCCATTCAATCAAGGTTTTAACTTCTTCCATACAGGAAATATCCCTCCTTACGGTGTATCAGATGTTCATCGTGGTCTAAACATTTATGGATTAAGTACCATGGGGAAATGGGAATATGATTATGGAAGACATATGGATTATACCAATGTAGAGAGAAATGAACTGCGCATGACAGAAGAAGCTTACTTATCAACACACAATAGTGCTAACTTCATAAGGCCTTCAAGTTTACCTCTGACATATCAGCAAAAGCCTCCAATCACCTTGTTACCAAGAGTATCCTTGACAGGGTTTCGGAAGAAAAAACTTCTTATTCTAGATCTTAATGGTTTGCTTGCGGACATCAACCAAGATTACCACAATTCCCATATGGCTGATGCAAAGGACATGTCTAAATGCACATTTACTGGACACAAAACATTGGAGAACATTCACAAACCATTGGTACTGAAGGAATTGAGGAAACTGTGGAACAAGGAAGAACCTGATCTACCGTGGGAGCAGGGGTACTATTCGCCTTCTAATACGTTACTTGTGGATGATTCTCCTTACAAGGCACTGCGTAATCCGCCATATACTGCCATTTTCCCTCAACCCTACAGTTATCTTAACAGCAACGATAATTCATTGGGCCCTGGTGGAGATCTTCGTGTTTATCTAGAGAACCAGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MVMLQGGGGAASSSSSKRRNQQRRQRRKRAAAGKKQGGSPASENNGEEHADAQGCLPDISTSKSENYKERAFSTQGDLPQKAGCDLEANLCAESVQSSSSQLVHSNENSNPKRPEVKNANSAGNSEHCMLDTRKTTDHDTSSMPLQDSRFDANVRIDGLHSTTEERVCQSTVGDGFTGMSNASYNPYSVQENQRIGPFMREPYTLHSHFLHPSHVRGYIGNKFMGFPPVHPMNAFDPFNQGFNFFHTGNIPPYGVSDVHRGLNIYGLSTMGKWEYDYGRHMDYTNVERNELRMTEEAYLSTHNSANFIRPSSLPLTYQQKPPITLLPRVSLTGFRKKKLLILDLNGLLADINQDYHNSHMADAKDMSKCTFTGHKTLENIHKPLVLKELRKLWNKEEPDLPWEQGYYSPSNTLLVDDSPYKALRNPPYTAIFPQPYSYLNSNDNSLGPGGDLRVYLENQK</aaseq>

Gene Sequence

<dnaseqindica>1..127#421..1385#1836..2021#2110..2170#2250..2293#ATGGTGATGCTCCAGGGCGGCGGCGGCGCCGCCTCGTCGTCGTCGTCGAAGCGGCGGAACCAGCAGCGCAGGCAGCGGCGGAAGCGCGCCGCCGCGGGGAAGAAGCAGGGAGGATCCCCTGCCTCAGGTAACTACCAACCGCGTTGCGAGTTGCGACGCGCTGTCGTTGTTGCTCGGGTTTCATCTCTCTCTCTCTCTCTCTCTCCCGCTAATAATAGACATTTGTTCTGCGGTTCGATCAAATCTAGAGAGGTAGCCTAGCATCCGTGAAAGCGAAACCCTCTGTTGTGTGAGAAGAAGACATGCTTTGCTTTTTCTGATATCTGTTTGAGTTTAAGAAACTCTGTTTGGAAATTTCTAAGTTTTAGTATTAAGAGGTTCAAGGCTACTACCTGATTAGATTACCTTTTTTCTTTGCAGAAAATAATGGAGAGGAGCATGCTGATGCTCAAGGATGCTTACCTGACATCTCTACTAGCAAGTCTGAAAATTACAAGGAACGTGCCTTTTCAACTCAAGGAGATTTGCCCCAGAAAGCAGGTTGTGATTTGGAAGCAAATTTGTGCGCAGAATCAGTGCAAAGTTCGTCCAGTCAGTTGGTGCATTCAAATGAGAATAGCAATCCAAAGCGTCCAGAAGTGAAGAATGCTAACTCAGCAGGGAATTCAGAACATTGCATGCTCGACACCAGGAAAACTACAGATCATGATACATCTTCCATGCCACTTCAAGATTCTAGGTTTGATGCAAATGTCAGGATCGACGGCCTACACTCCACAACTGAAGAGAGAGTTTGTCAAAGCACAGTCGGTGATGGTTTTACCGGCATGTCAAATGCTAGTTACAACCCTTACAGTGTACAGGAGAACCAGAGGATAGGACCTTTTATGAGAGAACCTTATACCCTGCACAGCCATTTTCTGCATCCATCACATGTTAGGGGTTACATAGGCAACAAGTTTATGGGTTTTCCTCCTGTACACCCAATGAATGCATTCGATCCATTCAATCAAGGTTTTAACTTCTTCCATACAGGAAATATCCCTCCTTACGGTGTATCAGATGTTCATCGTGGTCTAAACATTTATGGATTAAGTACCATGGGGAAATGGGAATATGATTATGGAAGACATATGGATTATACCAATGTAGAGAGAAATGAACTGCGCATGACAGAAGAAGCTTACTTATCAACACACAATAGTGCTAACTTCATAAGGCCTTCAAGTTTACCTCTGACATATCAGCAAAAGCCTCCAATCACCTTGTTACCAAGAGTATCCTTGACAGGGTTTCGGAAGAAAAAACTTCTTATTCTAGATCTTAATGGTTTGCTTGCGGACATCAACCAAGATTACCACAATTCCCATATGGCTGATGCAAAGGTTCGAGGCAAACTAGGTGAATTTACTTGTACCATCATCCATTATTATTATTTGCAAAATATTGTTCTAGAGTTGTTACACAAGATGTTAATGCTCAAAATATACCTCCCTACCAGTCTTCCGAAGACCTTACTGCCACGATTTTCTTAGTTTTTGCTTACAAAATTTTGAGCTAGGCATATGGTCCTCAAGAAAAAAGTATGATCTCTTGTCCATATCTATCTTTTATTACTTTTCCATCATTGCTTCAACTGTACTTACTGTGTAACTCTCATTTCTCCAGGCAGAATGTTGATTCAGTCATTGATATCATCATGAGAGATTTCAGACCTTTGCTAAAATTTTGTTGGGTAGGTCATATCTAACATTTTGGTGTCTGTGTCTCTACTAGTCTACTGCAAGTTATTTTTAGCCTGGAACCTTCATGATCATATCTAACATAATGGGCAGGACATGTCTAAATGCACATTTACTGGACACAAAACATTGGAGAACATTCACAAACCATTGGTACTGAAGGAATTGAGGAAACTGTGGAACAAGGAAGAACCTGATCTACCGTGGGAGCAGGGGTACTATTCGCCTTCTAATACGTTACTTGTGGATGATTCTCCTTACAAGGCACTGCGTAATCCGGTATTAGCTTTATTCTCTTTCACATACCACTTCATTTGAACAATATATTTGCCTTATTGATTTTTTTTTTCATGTCTGTGTTCTGCAGCCATATACTGCCATTTTCCCTCAACCCTACAGTTATCTTAACAGCAACGATAATTCATTGGGTATGTGATCATTTCGTATCTGTAGATGCCTTATCTTCCGGAGTAATACATCTTATTCACGCTGTGAATTGCAATGCAGGCCCTGGTGGAGATCTTCGTGTTTATCTAGAGAACCAGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009789