BGIOSGA009800

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Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009800| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009800, complete gene.| tag = OJ1112_...")
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Gene Name

BGIOSGA009800

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009800, complete gene.

LocusTag

OJ1112_G08.8

Ensembl Transcript ID

BGIOSGA009800-TA

Ensembl Protein ID

BGIOSGA009800-PA

Length

6162

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35220552..35226713

Sequence Coding Region

35226600..35226713,35226448..35226492,35225455..35225573,35224760..35225048,35220792..35221696
,35220552..35220705

Genome Context

<gbrowseImage1> name=IndicaChromosome03:35220552..35226713 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:35220552..35226713 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGATTGGCGATGGCTTTTTCGCCATGCCAGCATGTGGCCCGTAGTGAAAAGGTCAGATGGGTCCTCTCCAGAATGGGTGTGTCGAGAGAAGAGAACTGTCCAGCTCGAGTCTACCTCCAACTACGTCAGCCATTGCCTAACAGGTGAATTGAAGTTTTTCTTAGTAATCCCATGGTTTTTGCAACAATCCTTACATAGTGGCAATCCCTACCAAAACATTGAGGAGAATCTGATCATCACACTAGAGAAGACATATGAGGAAGTCGCAAAGAGTGCTGGAGCCAACCACCATCGGCTTCGAGTGCCGCCGTGGCGAGGGACGACGACGTCTGGTGTGACGCCATGGCGACCTGCTCCGGCCGCTGCCGCCACCACCATCCGCTCCGGCGACGGCGACGACGACGACGCGCGGAGGAAGCCCGCGGCGACTGGTGTACTCCGCGCCACTGCTAGCCTCGCCGCCCCTGCCGGACTTGGCCAGTCGCGCGACCTCCACCGCCTCCACGCGATCTCCGCCCATCGGGCTGCCACTTCTCCGCGTCGCTGGAGCCAGCCCGCCGAGATCCAGGCTAATCCAATGGATGACAACAGCATTCAGCAATCACTGCTAGCTGATAACCCTAATGTGCTGCAGCGGAAGCCGTCAGAAGGAGTAAATCGGTTTCGACGATGCAGGTCGACTCCTTCCACGGATCCTCTTCAAGGCCCCCCTGAAAAGGGCTCATCAGTTAAAGCCAAGGAGTTATTCAAGGAGATGAGGCCAAGTTTCAGACTAGTAGGACTTCTCCTTTTTATCTATCTTCTAGTGGGCGTCCTGGCCTTTTATGCTGTCATGGATGAGATATCAGGCAAGCGAACAAATAGAGTGCTTGACGCCTTGTACTTCTGTGTTGTCACAATGACCACCGTCGGCTATGGAGACCTCGTCCCAAACAATGACACAACAAAACTGCTTGCTTGTGCTTTCGTCTTCATGGGTATGGCAGTTGTTGCTCTCTTTGTCAGCAAAGTAGCAGATTATCTTGTTGAGAAGCAGGAGGTGCTGTTCTTCAAAGCATTGCACACGAATCTGAAGGGTGGTGAGACCAAGATGCTTAGAGCAATCGAGACAAACAGGATAAAGTACAAATTTTACACAAATGCACTGCTTCTGGTGCTATCCATTATTTCTGGGACCGTATTTCTGTGGAAAGTGGAGAAACTGAGTCTTGTTGATTCCTTCTACTGTGTATGTGCCACAATCACTACCCTGGGTTATGGGGATAAAAGCTTCTCATCCAAACTGGGACGTGTTTTCGCGGTCTTTTGGATTATCACGAGCACTATCATCATGGCACAATTCTTCATGTACCTTGCTGAGATCTACACCGAGCGACGGCAGAAAATGCTGGCCAATTGGGTTCTCACACGGAAAATGACAAAGATGGATCTTGAGGCAGCCGATCTGGATGATGATCGACAAGTTGGTGCTGCAGAATTTGTTGTGTACAAGCTCAAAGAACTGGGTAAGATCAACCAAGAGGAGATTTCTTCTTTTCTGGAGGAGTTTGAAAAGCTCGATGTCGACCACTCTGGCACTCTCTCCCCATATGACCTGACCCTAGCACAATCTGCTCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MADWRWLFRHASMWPVVKRSDGSSPEWVCREKRTVQLESTSNYVSHCLTGELKFFLVIPWFLQQSLHSGNPYQNIEENLIITLEKTYEEVAKSAGANHHRLRVPPWRGTTTSGVTPWRPAPAAAATTIRSGDGDDDDARRKPAATGVLRATASLAAPAGLGQSRDLHRLHAISAHRAATSPRRWSQPAEIQANPMDDNSIQQSLLADNPNVLQRKPSEGVNRFRRCRSTPSTDPLQGPPEKGSSVKAKELFKEMRPSFRLVGLLLFIYLLVGVLAFYAVMDEISGKRTNRVLDALYFCVVTMTTVGYGDLVPNNDTTKLLACAFVFMGMAVVALFVSKVADYLVEKQEVLFFKALHTNLKGGETKMLRAIETNRIKYKFYTNALLLVLSIISGTVFLWKVEKLSLVDSFYCVCATITTLGYGDKSFSSKLGRVFAVFWIITSTIIMAQFFMYLAEIYTERRQKMLANWVLTRKMTKMDLEAADLDDDRQVGAAEFVVYKLKELGKINQEEISSFLEEFEKLDVDHSGTLSPYDLTLAQSAQ</aaseq>

Gene Sequence

<dnaseqindica>1..114#222..266#1141..1259#1666..1954#5018..5922#6009..6162#ATGGCGGATTGGCGATGGCTTTTTCGCCATGCCAGCATGTGGCCCGTAGTGAAAAGGTCAGATGGGTCCTCTCCAGAATGGGTGTGTCGAGAGAAGAGAACTGTCCAGCTCGAGGTATTTGTCTTGATCCTGCAGGGAAATGAATGATACTACATGTTTTCTCTCGTGATGTTGATTCTGTGGTTGTATTGTTTCATGTGTGCTGTATGATATGGCTCTAGTCTACCTCCAACTACGTCAGCCATTGCCTAACAGGTGAATTGAAGGTAAAATAGAAGAGTATCTACACGGTGGTGGGTGATTTTTACTAGTAGTGCATTCTATTAATAACATTATCATCAGTGAAAATAATCTTTAGCCATTGATTTATGAGCTTTACTATCAGTAAAAAAAATTCAACTTCCAGTAGTTGAGGTGGTGTATAATATATACTCCCTCGGTCTCATAATATAACAACTTAGAACTAAATATACTATGAAATATCCAGATTCATTGCTATACCATGGGACGGGTTTGTTGTAATATGAAATGTCTCGTCTGATCTATAGGACAGAAGGAGTATGATATTTCGGATTAGAAAATATAGATGATTTAGATTAATTCTACTACCAGTAAAGATCATTGTAAAAACACCTCAAAATATAGAAACGGGTATAAATTTCATCAACCGAGCTACCTTTTGTTTTGATGAGAGAAATGGAAGAGACATTTGAGCATAGTTTTTCCAAGTGATCAGAGTTGTCTTGCTCTTTTCTTGCATATACTACCTCCGTCCTAAAATATAGTAATTTTCAGCTATGTTTCTAGACATACCTTTGTCCAAATAATTTGCTAAAAGTTATTACATTTTAGATTGGAGGGAGCAACATATATGGTGTTGAAGTAGTTGTCTAAAGATGATACGAAGTTAACCGGAGATATAAGTTATCTCAACACTCTCATACTTCTCTCAGATCGATTAGCACCAACCGCTCGATGTTCTGAAATCAGCGTGGCAGTTTCCCCTCCTATGTGTATCATGACTGCTACTGTACTAACGACGTCTCATGAGTTTCTATCGCTACTAAACCGATGCAGTTATCTCCTCAATTATCACGGTTATCTCGTGTGATAATCCTCTCGGTTCTTTAAATCTCTCAGTTTTTCTTAGTAATCCCATGGTTTTTGCAACAATCCTTACATAGTGGCAATCCCTACCAAAACATTGAGGAGAATCTGATCATCACACTAGAGAAGACATATGAGGAAGTCGCAAAGAGGTGATTGTTAAACGTTTGCACGAATGAATAAGTTCACTTTAGGTCCTCAATTTATCATTGAGTCTGAAATTTGTCTCTGGACAACAATACCATACGCATCCCTCAACTGTTAAAACGATTTTTAATAAGGTACCTAAGTGTCATATCTGATACTGATTGATTTTTTATAAAACGGATGAAGCTAATACTATTTTCTAATGGCAAATGTTTCGAAACTTTCAAGACTTAGAGCATCTCCAACAGCCTCTCCAAGTTAAATTTTGGCCATTCAAACGTAAAAAAGAGGTCCAACATGCTGGCCAACCGGATAGCCAACTTTGGCTAGGCAAAAACGCATCGCCAAATGGTGGGCCCCACATGGATTCACTTCCCCACGTCAATAATCCCGTCCTCTCTCGTGCTCCAGTGCTGGAGCCAACCACCATCGGCTTCGAGTGCCGCCGTGGCGAGGGACGACGACGTCTGGTGTGACGCCATGGCGACCTGCTCCGGCCGCTGCCGCCACCACCATCCGCTCCGGCGACGGCGACGACGACGACGCGCGGAGGAAGCCCGCGGCGACTGGTGTACTCCGCGCCACTGCTAGCCTCGCCGCCCCTGCCGGACTTGGCCAGTCGCGCGACCTCCACCGCCTCCACGCGATCTCCGCCCATCGGGCTGCCACTTCTCCGCGTCGCTGGAGCCAGCCCGCCGAGGTGCGGGCTCCCTTCGCCGCCTCTCCGCGCTGCCGGAGCCTAGCCGTCAGGCCGCCGCCTCTCCACACCGCCGGAGCCAGCTCGCCGAGTCGCGGCCTCCCTACCGCCGGGTCACCGCCTCTCCCTATCGCTGGAGCCAACTCGTCGAGTCACGACCTCCCGACCGCCGGTTCGCCGCCTCTCCGCGCTGCCGGTGCACCTCTCCGCACAGCCGGAGCTAGCTCGCCGAGTCGCGGCCTCCCTACCGCTGGGTCACTGCCTCTCCCTGCCGCGGGAGCCAGCCCATCGAGTCGCGACCTCCCGACCGCCGGTTCGCCGCCTCTCTGCGCGGCCGGAGCTCGCCGACCGAATCACCGCCGGTGCGCCTCTCCACGCAGCCGGAGCTAGCTCGCTGAGTCGCGGCCTCCCTACCGCCGGGTCGCCGCCTCTCCCTACTGCCGGAGCCAGCCTGTCGAGTCGCGACCTCCCGACCGCCGGTTTGCCGCAGGAGCTTGCCCGCTGGGTCGCCGCCTCTCCGCGCCGCCGGAGCTCGCCAACCGAATCGCCACCGGTGCTCGTTGGGAAGACTATTGCTAAGGTGAGACTGACATACTGGTCCCACCGTCAGTTTGGAGAGTATATTGGAGAGACTGTTGCAGGGAAAACTAAACTTTACTCTCCAAATGGGTTGGAGGGCTCTCCAAATGGGTTGGAGGGCTGGCCAAATGAGTAAATAGAGAGGCAAATTTAGCAAGACTGTTGGAGATGCTCTTACGGGGAGGAAAAACATAAGAATTTTAGAGGATTTCAATCCTATAGGAAAATTTTCTATAAAGCCCTTTGAAACAAAGGATCGAATCCTATCCAATCCTTTGAAAATCCTATGAAATGGACGATACTATAGAGATTTTGGAGAAAATTTAGCAAGAGCTTCAACCTCTTGGTAACTTTTCTTTTGAGTCTATCTCTCTCATCCAATTCCTGCGTTTTTCCTGTGGTTCAATTAAACGGTCGAGGGCCCCTTTGAAATGGAGGATTAGCAAAGGAATTTTGGAGGATTCATTTTCCTAAGGATTTTTTCCTATATTGCCCTTTGATTCATAGGAAGATGATAGGAAAACTTCCATAGGATTGCATTTCTATGATCAATTCCATAGAAAAATAAGCAAGAGGTTAGACCTCTTGTGAAACTTTCCTTTGTTGAGGGTATCATGTGGTATAATCAAAGGGCTCTTCTCTCCATTTCCTGTGTTTTCAATTCCTGTAGAATTAGAAAAACATACAACTTCAATTCCTACGTTTTTCATATTCCTGTGTTTTTCCTATCCTGCGTTTCAAAAGGGACCCCATTCTTATTTTTTCCTGTGTTTTGTAATCCTCTATTTTACACTTATATTTCTATCAAAATCCTACGTTTTTCCTATTTCTATATTTTCTCAATCCTGCTATTCAAATGGCCCCTTAATGGACGCATCCTGCACGACGACGGACGCAGGGCAATGCCATATGTCAGACCGAACCTTTTTTTTCTTTTTCTTTCCCCTTTGGTTCGTGCAAACCAATCCCTGCCTTCCGTTCTACCGGAGATCCCCTGGTAAAATTTTACACCCTATCACATCGAATATTTGGGCATATATATGGAGTATTAAATATAAACGAAAAAAATAACTAATTACACAATTTACGTGTAAATTGCGAGACAAATCTTTTAAGCCTAATTGCGTTATGATTTCGCAGTTTAAAGACGTATTCTGTAATTTGTTTGTGTGTCCATATATCCGATGTGACACGCCAAAATTTTACAAAACTACGTCTAAACACAGCCCTAGTAGTAGATCCAGCCTGTGACTGCGACTTGTGGCCGCTGGTTGCAGTTGCCGTCACAAGTTCACAAGTCAGAACACACCTGCGGCTGCGTACGCTGAGCTCGTTGATAGATTTGGGCTAGCCCCAACGTTGACAACATCCACCGTTCCGGTGGAGTTAGCCGGACGCCTTAAAATAGAATAGCCCCGGACGCGGCAACGACGCGCAGAATCTTGGCCGGTGTGGTGTTGCAGCCAGGAGCCAGAGCCCTCAACCCCGCAGGCGCGCAGCAGCAGTGGCGCGCGCGCGCGGGGCATCCGTCTCAGGCGGCTCAGGGCAGGTCGGGCGAGAGGGAGAGGAGATCGACGCGCGGCGTCCCCTCAGCCGGAGGAAAGGTAAGAGAAGCTCTCTCTGTCTCCCGTTGCCTCCCTTGCTTTCTTCGCACGAAGAGCAGTGGCATACTGGCATATGGCCGTGGGACTGTATCGAGAGCAGCTGTTCTTGATGTGTGCTAGTACCTTATTTGCTGTTTCGACCACCCTAGTCAATCCCTGCATCGTCTCGCAAATTTCTTCTACGGTTTGATGCCCTTTTTATGGAGAAGAAGAGAGAACTGGAGAAATATTATCTAAACGAATGAGGATAGAGATAGGTGGGGGGACTTGGTCGACAAAGAAATGGACAGATCGAGGGGAGATCCGATCAGGGTAGTAGAGATCCTCAATAGTCAATACCTGCACCCTTCCCGTGACCAAAGGGCAACTGGTCAAAAAGGTCAGGCTGCCTTGCTTTGATTTTGGCCTTAACCAGATCATCTTGCCTGCTGCTGCTAGCGTATAATAATGCTCAAGTCAAATAACACATTAGCTGATTAGGGTTTAGGATGATGGTAACTCACCTGGGGAAATGGAGCAGAATGGTTTCACGTCCTGCTGCTCAATTAGAGTTGCTCATGACCAGCCGTGCACCTCTTTCCGATAGAATTCAGTTTATAGGAGGCATATGCAGGTGACTGGAATTTTCTGGCGTAGCACACCTGCAATTGGAGCAATCAGATATTGTAGGATTCTAGCATGTAATAATTCACAAAAAAATAATGCTTAGAAGAATGCAGCCCCTCGGTTCTCTGTGCAATCCTGTGATATCCAGCAAATATTGCCTTAGTTTTACATAACTTTTGAGCTTACAAATCCTTTCTTTCCATCCCACTTATTTGTCAAATTGCACAACGTTCATGCCATTTTCTGAATTTTAGGTTTTTGGCTGTGACCGTAACAGATCCAGGCTAATCCAATGGATGACAACAGCATTCAGCAATCACTGCTAGCTGATAACCCTAATGTGCTGCAGCGGAAGCCGTCAGAAGGAGTAAATCGGTTTCGACGATGCAGGTCGACTCCTTCCACGGATCCTCTTCAAGGCCCCCCTGAAAAGGGCTCATCAGTTAAAGCCAAGGAGTTATTCAAGGAGATGAGGCCAAGTTTCAGACTAGTAGGACTTCTCCTTTTTATCTATCTTCTAGTGGGCGTCCTGGCCTTTTATGCTGTCATGGATGAGATATCAGGCAAGCGAACAAATAGAGTGCTTGACGCCTTGTACTTCTGTGTTGTCACAATGACCACCGTCGGCTATGGAGACCTCGTCCCAAACAATGACACAACAAAACTGCTTGCTTGTGCTTTCGTCTTCATGGGTATGGCAGTTGTTGCTCTCTTTGTCAGCAAAGTAGCAGATTATCTTGTTGAGAAGCAGGAGGTGCTGTTCTTCAAAGCATTGCACACGAATCTGAAGGGTGGTGAGACCAAGATGCTTAGAGCAATCGAGACAAACAGGATAAAGTACAAATTTTACACAAATGCACTGCTTCTGGTGCTATCCATTATTTCTGGGACCGTATTTCTGTGGAAAGTGGAGAAACTGAGTCTTGTTGATTCCTTCTACTGTGTATGTGCCACAATCACTACCCTGGGTTATGGGGATAAAAGCTTCTCATCCAAACTGGGACGTGTTTTCGCGGTCTTTTGGATTATCACGAGCACTATCATCATGGCACAATTCTTCATGTACCTTGCTGAGATCTACACCGAGCGACGGCAGAAAATGCTGGCCAATTGGGTTCTCACACGGAAAATGACAAAGATGGATCTTGAGGCAGCCGATCTGGATGATGATCGACAAGTTGGGTAAGTACACAACTCACATAGAGTATTTTTATTCCATCGTGTCCCTAAAAGAATCAGTGTTGATATATGAAATCTGGTCTGTGCAGTGCTGCAGAATTTGTTGTGTACAAGCTCAAAGAACTGGGTAAGATCAACCAAGAGGAGATTTCTTCTTTTCTGGAGGAGTTTGAAAAGCTCGATGTCGACCACTCTGGCACTCTCTCCCCATATGACCTGACCCTAGCACAATCTGCTCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009800