Os12g0236400

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Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0236400| Description = Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Version = NM_001072994.1 GI:115487949 GeneID:4351850| ...")
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Gene Name

Os12g0236400

Description

Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase)

Version

NM_001072994.1 GI:115487949 GeneID:4351850

Length

3879 bp

Definition

Oryza sativa Japonica Group Os12g0236400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7475484..7479362

Sequence Coding Region

7475622..7475724,7477003..7477148,7477236..7477355,7477476..7477643,7478283..7478372
,7478972..7479070

Expression

GEO Profiles:Os12g0236400

Genome Context

<gbrowseImage1> name=NC_008405:7475484..7479362 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7475484..7479362 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgaacctggaggacgtgccgtcgatggagctgatgacggagctgctccgccgcatgaagtgcagctccaagcccgacaagcgcgtcatcctcgtcggtccacctggctgcggaaagggaacacagtcaccgctgattaaggatgaattttgcttgtgccatttagccactggtgatatgttgagggctgcagtggctgctaaaactccacttgggattaaggctaaagaagctatggacaagggagagcttgtttctgatgacttggttgttgggattattgatgaagccatgaagaaaacttcatgccagaaaggttttatccttgatggtttccctagaactgttgttcaagcacagaagcttgatgaaatgttggccaaacaaggtactaagattgacaaggttctaaattttgcaattgatgatgcaatactggaagaacgaattaccggtcgttggatccacccatcaagtggtagatcttatcatacaaaatttgctcctcctaagactcctggacttgatgatgttactggagaacccttaattcaaaggaaagatgacacagctgcagtattgaagtcaaggcttgaagccttccacgtacaaactaagcctgtgattgactactacaccaagaagggcatagtcgcaaatctgcatgccgaaaaaccaccaaaggaagtgactgttgaggtccagaaagccctatcataa</cdnaseq>

Protein Sequence

<aaseq>MAANLEDVPSMELMTELLRRMKCSSKPDKRVILVGPPGCGKGTQ SPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKK TSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILEERITGRWIHPS SGRSYHTKFAPPKTPGLDDVTGEPLIQRKDDTAAVLKSRLEAFHVQTKPVIDYYTKKG IVANLHAEKPPKEVTVEVQKALS</aaseq>

Gene Sequence

<dnaseqindica>139..241#1520..1665#1753..1872#1993..2160#2800..2889#3489..3587#cagaaacgaaacaaaaagccccaccacctaaacctcctcgatccgaccgagactcctccatttcagcggcgcacgcggagagcacgcgacgcgagttcgtcgacgaacaaggctagtgcagtagttgttgctgcggagatggcggcgaacctggaggacgtgccgtcgatggagctgatgacggagctgctccgccgcatgaagtgcagctccaagcccgacaagcgcgtcatcctcgtcggtaacgcccgcctctttcttcttcctctctctctctctctctctcggtggtttggttcgttggttggtggatccggttcggcggcgcgtgctgccctggtcgggagatggggaaagattgctgtggcttgctggggatgttgcgttagatccgtgcaaagctgtctccctttctttttttgggtcaaatctgggtttcttcttccgctctcctcgtggttttttgcaaacaaaaatgtttggcttcgagggaaatcttgtaaaatttacttgttgtttccacctttggaaactgcggcaatttttgatggtcaaattgcgtttgttcttgcaacttgcgattgagtcgattggggtttttccatttgacggaaggatattagtgacagaaatcaagcgaaaagaaatatttatatgatcggtgttcgacgcataataggaatttcaggcgtttaaggtatagaatttattcgtattcagtagtatgtgttgaaattggaggttgcattttttgttctcacacatgttattttaaatttgtcatgtggcatgtgttgaggatgagcagaaaacaacagggcggttcgtggttttttgtctgatgtggaaactttttaaaataaccaaaacagaaaggtgcaactttatatgtatcgataaaggtttggaaatgtcactcggaataaaaacaaagagatagacgtattactcctttgtttcaatattcactagtaaaccaaatcgatctgtatggttatgtaaactgtgtgacacaacaaatttcaaataaacttgttctgttgcgcaatgctctgcttcagcaatgcactactctaatttactggtcatcaaacaaatcattatggaaggtttattctattgttcttttacttcatgaagtatagctaatttacaaacactctgcactacctaatttaagtggaccgaatctagtcatcgtctgctcttagctatctccaaattgatggcttgttctaattcatgcatgtgtcactgagacactggtgttgttaacagcattgtaagaatgccagttacaccctaatatgttattgaggataggatagtgttgacaacttgatatccatagaggcaaagtgatgtcaaattttgatgcttttatggatagtttaataggcatctgggcagaaagcttgaatattgatgttctagaatggtaagacaatctctgcgtgttctaaaaaaaaaaaaggtaagacatacaattttgacatccctttattttactaaattttaggtccacctggctgcggaaagggaacacagtcaccgctgattaaggatgaattttgcttgtgccatttagccactggtgatatgttgagggctgcagtggctgctaaaactccacttgggattaaggctaaagaagctatggacaaggtagtttttaagaaacatatagcaacagaaattataaccagcaggaatgggtttcttgattcttttgtttctttccttatcttctagggagagcttgtttctgatgacttggttgttgggattattgatgaagccatgaagaaaacttcatgccagaaaggttttatccttgatggtttccctagaactgttgttcaagcacagaaggtgaggtccttggtcaatatgcaccgctatataaaagagctcctttttgttattagagctgtctatataaatggacagtttctatcattgtatcacttttcttactaaaaaatggtgcagcttgatgaaatgttggccaaacaaggtactaagattgacaaggttctaaattttgcaattgatgatgcaatactggaagaacgaattaccggtcgttggatccacccatcaagtggtagatcttatcatacaaaatttgctcctcctaagactcctggacttgatgatgtaagtcataccagattacttgctctcgcttgcatttgtcagatactcagatttttaccattttcattatttctattagatttggtacatatattgtttgatgcttgcagcatatgcgcctttaccataatttccctgtctcatcatcgatcatcgtagtactctgcttacttgttttttaagaacaaaacatgagccatcattctttcaaaataaaaaaggttcattgagtaccttcttcttgccactgtttatttagtttgcttcccaaatagttaaataggtagtgtgattatggatatatttttcttgttttggttgtttctcgtacgaagagtaaaatgcaccttttgttgacaagaaatgataggcagtgtttgcatgacacacttttgcttccttttctgacaattatgcctgtttaagtgtccataaatagatacatcgacatgtttttgtagcaggagattgtatattgtttctattgcttccattaaaagcatattcttctttagcaatgatttcatgtgggacatatttgtgctgctattaagtaaatttgtttgatatcatatatatcttttaattggtaatattatgtgcacttctgctccctgattgctttgtcttttcacaaaggttactggagaacccttaattcaaaggaaagatgacacagctgcagtattgaagtcaaggcttgaagccttccacgtacaaactaagcctgtatgtttcctttagcaactacgtttttaaatattcagatattcttttaggatgtagtcgtacttcagttaaggcggattccttcagttgcattacagtgtttcctgtatatctttcattgtttttaagttctgattacattttgccaacccttcatttctagatttgtaccttttcttcatttgtgggtctgcttagtagagctccaataattcttggtgctgggtatctctagatccaaaaattctttttgagtatgaactgggagtagattgggagtttttcagtgaaccatcttgttcattttctcctacaaattcgacatcatttgagaattcatgagatggagttcttatatatttcatatgactgtataatgtattgcataagatttttgacaacatggtgaagtacacttccattgcggtatacgtttatgtatctttgttgcctgatatttccatctcctggcttcaatttcctcatttcttttgtaatccttagttttattgtgaaatattgtttattatctgccataatgcaaagcagttgctgcctgttcactcaatttaattcgtggaatggtttccttcctctaggtgattgactactacaccaagaagggcatagtcgcaaatctgcatgccgaaaaaccaccaaaggaagtgactgttgaggtccagaaagccctatcataaactgccagttcttcagcctataaacatgacatgtgccgaaaaccccttacactgggttttctagatgtttaaactgctgccaacaccatgtggttttcattttgatttgctgtatggcgcaattgctccattttatcacagttttcgcttcacagtctgaaatttgtcaaaataatttgttggaatgaggaaagaagttttgtataccaacaccgatataattacatcaagtcaatcttgacagggtattccttctgttcatcttaattttggaattgatgcctttgtggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0236400, RefSeq:Os12g0236400