Os12g0236600

From RiceWiki
Revision as of 10:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0236600| Description = Conserved hypothetical protein| Version = NM_001072996.1 GI:115487953 GeneID:4351852| Length = 1624 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0236600

Description

Conserved hypothetical protein

Version

NM_001072996.1 GI:115487953 GeneID:4351852

Length

1624 bp

Definition

Oryza sativa Japonica Group Os12g0236600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7495636..7497259

Sequence Coding Region

7495871..7496620,7496708..7496992

Expression

GEO Profiles:Os12g0236600

Genome Context

<gbrowseImage1> name=NC_008405:7495636..7497259 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7495636..7497259 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggaggcgtcctcgccaccgcccccgccgccgccgccggcggtggtgcatggagccggctcgtcgttgtccggacagaagaggaaggccgccatggacgatggcagcggcgaggacgacaacgtgccaccatggctgaaactgtctctcggtccggtggcctacggggtcgccacgggcgtcgtcgacgacgactcctcttcttgcgctccggcagtgacgacgtcgatcgaggtgcggccgccggtggccactggtgtggtctccggatcggcggcccaaccatcgattgaacatgttcctgccgatgatgcggtggtcacgccgtcttttgtggcctcggcagccggtgtgctgttcaccggctgcgcgagtggtttgatccccaatggtgcagtctcggtatttccatgctttaattttcttggaccttcaatgtcatcatcaatcctatcgcacctccatcaacaattctcctcgactcgacgtcaaagcaacgcgtccatggcaagatctagccgcacctgtggcggggacgacgacatggcacttagcaacatcgctgcgccgaacgtcacaaacggtggcggcaacaacaacaacgacggtaatgctcttcctgatccaccgtatccttgggctaccaatgaaccggccaaacaccactccctcgccgagctcgctcgccgcgacatcaccaccatccaaggcgacgctcggtgcaggcgctgtgatgcacgcaaggcgcggtggatgaaccctgtcgtgccgaactgtgacgactgcggccatgagaaatgcttgcgtccggtgatcgctgccgagaaggagcgcatcaactggttgttcctactgcttggggagacactgggtttgtgcacacttgatcagctcaagtatttctgcgcgcacaccaaccggcatcgcaccggtgccaaggatagggtgctcttctccacctacgaagagctatgcaaccaacttgttcctgggctaatcacaagacgtgaccagttgaggatgcgttag</cdnaseq>

Protein Sequence

<aaseq>MGREASSPPPPPPPPAVVHGAGSSLSGQKRKAAMDDGSGEDDNV PPWLKLSLGPVAYGVATGVVDDDSSSCAPAVTTSIEVRPPVATGVVSGSAAQPSIEHV PADDAVVTPSFVASAAGVLFTGCASGLIPNGAVSVFPCFNFLGPSMSSSILSHLHQQF SSTRRQSNASMARSSRTCGGDDDMALSNIAAPNVTNGGGNNNNDGNALPDPPYPWATN EPAKHHSLAELARRDITTIQGDARCRRCDARKARWMNPVVPNCDDCGHEKCLRPVIAA EKERINWLFLLLGETLGLCTLDQLKYFCAHTNRHRTGAKDRVLFSTYEELCNQLVPGL ITRRDQLRMR</aaseq>

Gene Sequence

<dnaseqindica>236..985#1073..1357#atctcaaaagaaacaggagcctttgctatttcctcggccccgaccaacaaacaaacaaacagcggatgagcggagagtagtcaagccgcgtcgtcgcgcgtggtcgtcgatcgcatcgcgctctctcgcggttgtcgtccaaacgcgttgaaattaaccaccgatcgatcgagatggccgtgcgtgtaaagccctacgagtgatcgccccggccggcgctctctcttccctcgtcatggggagggaggcgtcctcgccaccgcccccgccgccgccgccggcggtggtgcatggagccggctcgtcgttgtccggacagaagaggaaggccgccatggacgatggcagcggcgaggacgacaacgtgccaccatggctgaaactgtctctcggtccggtggcctacggggtcgccacgggcgtcgtcgacgacgactcctcttcttgcgctccggcagtgacgacgtcgatcgaggtgcggccgccggtggccactggtgtggtctccggatcggcggcccaaccatcgattgaacatgttcctgccgatgatgcggtggtcacgccgtcttttgtggcctcggcagccggtgtgctgttcaccggctgcgcgagtggtttgatccccaatggtgcagtctcggtatttccatgctttaattttcttggaccttcaatgtcatcatcaatcctatcgcacctccatcaacaattctcctcgactcgacgtcaaagcaacgcgtccatggcaagatctagccgcacctgtggcggggacgacgacatggcacttagcaacatcgctgcgccgaacgtcacaaacggtggcggcaacaacaacaacgacggtaatgctcttcctgatccaccgtatccttgggctaccaatgaaccggccaaacaccactccctcgccgagctcgctcgccgcgacatcaccaccatccaaggcgacgctcggtgcaggcgctgtgatgcacgcaaggtgatcgtctacaacattgccactaagtttcaagaggtgtccgactacttacgccaaaaccaccaacatatgcatgaccgtgcgcaggcgcggtggatgaaccctgtcgtgccgaactgtgacgactgcggccatgagaaatgcttgcgtccggtgatcgctgccgagaaggagcgcatcaactggttgttcctactgcttggggagacactgggtttgtgcacacttgatcagctcaagtatttctgcgcgcacaccaaccggcatcgcaccggtgccaaggatagggtgctcttctccacctacgaagagctatgcaaccaacttgttcctgggctaatcacaagacgtgaccagttgaggatgcgttagttattaattttttcggttgttaatttagacttttcaagatgcaaccatgcgtgcctacgtggttgttacattaggttcatctagagtctctgtcttggagtctcgtctctataagtctgtgagtgtttgagatagttcgcgatatattatttctctcttttatttgtaagttgtgcaactggatttgaatgtgggtgtgtattgtttgttttaatatactatttatgtcctttcagctttgaatgataggcgcaatttggtgtggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0236600, RefSeq:Os12g0236600