BGIOSGA009830

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Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009830, complete gene.| tag = OsI_134...")
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Gene Name

BGIOSGA009830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009830, complete gene.

LocusTag

OsI_13474

Ensembl Transcript ID

BGIOSGA009830-TA

Ensembl Protein ID

BGIOSGA009830-PA

Length

4740

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34800630..34805369

Sequence Coding Region

34804096..34805369,34802874..34803182,34802420..34802726,34802158..34802304,34800630..34801643

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34800630..34805369 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34800630..34805369 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATATCTTGCATGGAGGGCTCGACAAACTACTGACTGGAAGTACAACAGCGTTTTTTGAATGGCTCCAGAGTTCTCAGCAAACAATAAGTAAAGTGTTAGACCAGTGCGCTTTAATAATGTGGGTTCAATATATTACTGGCTCAGCAAAATTTCCTGGGGTGAGAATAAAAGGCATGGAGGTCAGGCGCAAGAAAGATATGGGACGAAAATTACGTGAAATTGCAAAACTAGATTCAAGGCACTGGGAGCAGATAAATGAACGGAGGTACAATCTTGATTTGGTTCGTGATGTAATGTCTACAGAGCTAAGAGCGATTCGTCAAGACAAATATGGATGGATACTGCATGGAGAAAGTGAGTGGCAAAGCCAGCTCCAACAGCTTGTACATGAAAGAGGCATTTTCCCTGTGCGGCAATTATCGACAGAGCCTGCATGGCAGCTGTGCGCTGTTGAAGGACCGTATAGAATGCGGAAGAAACTTGAACCGTCCAAATTTAAGATAGATACTATTCATAATGTTCTAGCCAGCAACCTTGGGTTAGATGATGTTAAGATTACCAAGAAAGAGGATGGGCACATGGTGATGACATCTGGATCAGATACAATGTCAGGCTTGAATCTTTTGACCTATGACACAGAACGGAAGGATCTTGATGCTGCTGATTTTGCATCGTTCAAAGATGAAGATGACATATTCAAAGGAGGAAGCACAGTGTCACCTCCAATTGGCTGGACTGATGATAAAAGCAGCATTAACGAACAAAGTCTTCACTCTGCAACAGAACATGGAGCGAAATCAAGTTCCTTTTCTTATCACATGACAGAGAGTGTCCACGGTAAATCTGAATTTAATTCACCTAGACGGGCACCTTCAGTTAAGGGCACCGATACAAGAACCTCAGAGGATAAATCGGAAAAGGAGTTGCTTGACAATGGAGAGTATCTTATCAGACCTTATCTGGAACCTTCCGAAAAAATAAGGCATAAGTACAATTGTGAACGGGTTGCTGGTCTTGACAAGCATGATGGAATATTTTTAATTGGAGAACTTAGCTTATACATCATTGAGAACTTCTACATTGATGATTCCAATTGCATTTACGAAAAAGGCAATGAAGATGAGCTCTCTGTCATCGATCAAGCTTTAGGGTGTAAAAAAGGATGTATTGGGAAGCTGCGATTCTCACCAAAAATCACCATGTACGTGGGGTGCAACAGCAAAAGTTTTGCTTGGTGGCAGAGCATGGGCATACAATGGAGGTGCTTGGGGTTGGACACAACAATATCAGCATCCTCAAAACAGGATAGCGGTGAGGGGAGCCGTCTTTTCAAAATAATGGCAAAATCATTTTCTAAAAGATGGCAGAGTGGAGAAATTACCAACTTCCAATATCTCATGCATCTAAATACACTTGCTGGTCGAGGATACAGTGACCTTACGCAATACCCAGTATTTCCATGGGTTCTTGCAGATTATGAGAGTGATACTTTAGATCTGAGAAACCCACAGACGTTCCGTAAGCTTGACAAACCAATGGGATGTCAAACTGAAGGGGGAGAAGAGGAATTCCGTAAGAGATATGATAGCTGGGATGACCCTGAAGTACCAAAGTTCCATTATGGTTCTCATTATTCAAGTGCTGGGATTGTCCTTTTCTATCTTTTAAGACTGCCTCCCTTTAGTATGGAAAATCAGAAATTACAGGGTGGACAATTTGACCATGCAGACCGTTTATTCAATAGTGTTAAAGATACATGGGTAAGTGCTGCTGGCAAGAGCAACACATCAGATGTCAAAGAATTGATTCCGGAGTTCTATTATTTGCCTGAATTTTTGGAGAACCAATTTAATCTGGACTTGGGGGAGAAACAGTCCGGAGAGAAGGTTGGTGATGTTGTTTTGCCGCCTTGGGCTAAAGGTAGCTCCAGAGAGTTCATCAGGAAGCATCGAGAAGCCTTGGAGTCAGACTATGTATCCGAGAATCTGCATCACTGGATAGATCTTATTTTTGGATATAAGCAGAGAGGAAAGGCAGCTGAAGATGCTGTAAATGTCTTCTATCACTACACGTATGAAGGCAATGTTGACATAGATTCCGTATCAGATCCTACCATGAAAGCTTCGATACTGGCACAAATCAATCATTTTGGTCAGACCCCCAAACAATTATTCCAAAAACCACATCCTCAGAGACGGACTGACAGGAAGGTCCTTCCTCATCCTCTACGGTACAGCGCGTATCTTACACATCAAGAGATTCGGAAGACAACATCATCAGTTTCCCAGATTGTGACCTACAATGATAAGATCCTAATTGCTGCAGCGAACAGCTTTCTCAAGCCAGTAAATTATAGTGAATATATTTCCTGGGGATTTCCTGACCGCAGTTTGAGAATATTGACCTATGATCAGGATAAACTTGTATCAACACATGAAAACCTTCATGGTGGTAGTCAGATTCAGTGCACTGGAGTTAGCCATGACGGCAACATTCTCACAACAGGTGGTGATGATGGTGTAGTTGCAGTATGGAGATTTTTCAAAGATGGCACTCGTCGTCTCCTGAGAATGGAGAAAGCTCTGTGCGCTCACACTGCCAAGATAACATGTATCTATGTGAGCCAGCCTTACTCATTAATTGTCTCTGGCTCCGATGACTGTTCAGTGATCTTGTGGGACCTGACAAGCCTGGCCTTTGTGAAGCAGCTGCCAAGGTTCCCAGCATCAGTGTCTGCGTTACATGTGAACAATCTCACTGGTGAGATCCTGACTGGTGCCGGTGTTCTTTTTGCTGTTTGGAGCGTCAACGGAGACTGTCTTGCTGTGGTTAACACCTCTCAGCTTCCTTCGGATCTCATCTTGTCTGTGGCAAGCACTACAAACTCGGACTGGCAGGACACAAACTGGTACGTGACAGGTCATCAAAGCGGTGCTGTGAAGGTATGGAAGATGGTGCACTACACGTCTGATGAGGCAGCAAACAGCAAGAGCAAATCTCCACCGTCCACCCTTGGAGGGATGAGCTTGAATGGCCAGACTCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDILHGGLDKLLTGSTTAFFEWLQSSQQTISKVLDQCALIMWVQYITGSAKFPGVRIKGMEVRRKKDMGRKLREIAKLDSRHWEQINERRYNLDLVRDVMSTELRAIRQDKYGWILHGESEWQSQLQQLVHERGIFPVRQLSTEPAWQLCAVEGPYRMRKKLEPSKFKIDTIHNVLASNLGLDDVKITKKEDGHMVMTSGSDTMSGLNLLTYDTERKDLDAADFASFKDEDDIFKGGSTVSPPIGWTDDKSSINEQSLHSATEHGAKSSSFSYHMTESVHGKSEFNSPRRAPSVKGTDTRTSEDKSEKELLDNGEYLIRPYLEPSEKIRHKYNCERVAGLDKHDGIFLIGELSLYIIENFYIDDSNCIYEKGNEDELSVIDQALGCKKGCIGKLRFSPKITMYVGCNSKSFAWWQSMGIQWRCLGLDTTISASSKQDSGEGSRLFKIMAKSFSKRWQSGEITNFQYLMHLNTLAGRGYSDLTQYPVFPWVLADYESDTLDLRNPQTFRKLDKPMGCQTEGGEEEFRKRYDSWDDPEVPKFHYGSHYSSAGIVLFYLLRLPPFSMENQKLQGGQFDHADRLFNSVKDTWVSAAGKSNTSDVKELIPEFYYLPEFLENQFNLDLGEKQSGEKVGDVVLPPWAKGSSREFIRKHREALESDYVSENLHHWIDLIFGYKQRGKAAEDAVNVFYHYTYEGNVDIDSVSDPTMKASILAQINHFGQTPKQLFQKPHPQRRTDRKVLPHPLRYSAYLTHQEIRKTTSSVSQIVTYNDKILIAAANSFLKPVNYSEYISWGFPDRSLRILTYDQDKLVSTHENLHGGSQIQCTGVSHDGNILTTGGDDGVVAVWRFFKDGTRRLLRMEKALCAHTAKITCIYVSQPYSLIVSGSDDCSVILWDLTSLAFVKQLPRFPASVSALHVNNLTGEILTGAGVLFAVWSVNGDCLAVVNTSQLPSDLILSVASTTNSDWQDTNWYVTGHQSGAVKVWKMVHYTSDEAANSKSKSPPSTLGGMSLNGQTQ</aaseq>

Gene Sequence

<dnaseqindica>1..1274#2188..2496#2644..2950#3066..3212#3727..4740#ATGGATATCTTGCATGGAGGGCTCGACAAACTACTGACTGGAAGTACAACAGCGTTTTTTGAATGGCTCCAGAGTTCTCAGCAAACAATAAGTAAAGTGTTAGACCAGTGCGCTTTAATAATGTGGGTTCAATATATTACTGGCTCAGCAAAATTTCCTGGGGTGAGAATAAAAGGCATGGAGGTCAGGCGCAAGAAAGATATGGGACGAAAATTACGTGAAATTGCAAAACTAGATTCAAGGCACTGGGAGCAGATAAATGAACGGAGGTACAATCTTGATTTGGTTCGTGATGTAATGTCTACAGAGCTAAGAGCGATTCGTCAAGACAAATATGGATGGATACTGCATGGAGAAAGTGAGTGGCAAAGCCAGCTCCAACAGCTTGTACATGAAAGAGGCATTTTCCCTGTGCGGCAATTATCGACAGAGCCTGCATGGCAGCTGTGCGCTGTTGAAGGACCGTATAGAATGCGGAAGAAACTTGAACCGTCCAAATTTAAGATAGATACTATTCATAATGTTCTAGCCAGCAACCTTGGGTTAGATGATGTTAAGATTACCAAGAAAGAGGATGGGCACATGGTGATGACATCTGGATCAGATACAATGTCAGGCTTGAATCTTTTGACCTATGACACAGAACGGAAGGATCTTGATGCTGCTGATTTTGCATCGTTCAAAGATGAAGATGACATATTCAAAGGAGGAAGCACAGTGTCACCTCCAATTGGCTGGACTGATGATAAAAGCAGCATTAACGAACAAAGTCTTCACTCTGCAACAGAACATGGAGCGAAATCAAGTTCCTTTTCTTATCACATGACAGAGAGTGTCCACGGTAAATCTGAATTTAATTCACCTAGACGGGCACCTTCAGTTAAGGGCACCGATACAAGAACCTCAGAGGATAAATCGGAAAAGGAGTTGCTTGACAATGGAGAGTATCTTATCAGACCTTATCTGGAACCTTCCGAAAAAATAAGGCATAAGTACAATTGTGAACGGGTTGCTGGTCTTGACAAGCATGATGGAATATTTTTAATTGGAGAACTTAGCTTATACATCATTGAGAACTTCTACATTGATGATTCCAATTGCATTTACGAAAAAGGCAATGAAGATGAGCTCTCTGTCATCGATCAAGCTTTAGGGTGTAAAAAAGGATGTATTGGGAAGCTGCGATTCTCACCAAAAATCACCATGTACGTGGGGTGCAACAGCAAAAGTTTTGCTTGGTGGCAGAGCATGGGCATACAATGGAGGTGCTTGGGGTAAGGAGAAGCTTTGCAGTAGCAGCAATTTGCCTCATCCATGGCACATGTGGAAGCTTGATAGCGTCCATGAGCTCCTAAAGCGTGATTATCAGCTTCGCCCTGTTGCAATTGAGATTTTTAGTATGGACGGGTGTAACGAGCTTTTAGTTTTCCACAAAAAGGAGAGGGAGGATGTTTTCAAAAATCTGACCGCCATGAACCTCCCACGAAATAGCATGTTTGTATTCTTAACTCTTTGCAAATACATACACTCAGTAATTACCATGCATGTTCAGTCATTTCTTTAGTATAAGATCTGAATGTCAGGTCCTACTATCAAGGCTATGTAGTTTTCAGAGTTGAAACCATCTAGATATGATCCCTTGGCATAGGTTCACAACAGGTTTATGTGTTTCTTTGTCTATCCTGATAGGTTTATCACAACCGCTGAACAAGATTAGACTGGAAACTGTCTGCTTACGTCCATCGAGTACCGCTCAATGTCATTTTTTTAAAGAAAAATCTTAGCAACAAAATAGAGTAGTTTTTTTTTGGACTAACACCACAAGAAACGGGCATAATTCTGTTAAAACTAGCGAAACTGCCAGAAATATATGTAAATTTGCAATATCTTTGTTTTTTTTATTAGTCAATTCTCACCCTTCCCTACTTAATCTGGTAATTAGCAAGTTCTAAGTGATTTATCATCTATGGTGGGAACATATTGTGAGTGCAAGTATGAATTGATAGACAGACACATGAAATTAAGTCCTAAGGCCTTTATTGTATGCTGGAGGTTTCTAATTGCTCTCATGTTCTTCCTGCACATGCACAGTCAAATTTTAAGTTGCACAACTAGGCATTATTTTTTAATGATTTTTACAATACACTTTTTTTGACATTGAAGTATACTTTTACCTATCATTAACAGGTTGGACACAACAATATCAGCATCCTCAAAACAGGATAGCGGTGAGGGGAGCCGTCTTTTCAAAATAATGGCAAAATCATTTTCTAAAAGATGGCAGAGTGGAGAAATTACCAACTTCCAATATCTCATGCATCTAAATACACTTGCTGGTCGAGGATACAGTGACCTTACGCAATACCCAGTATTTCCATGGGTTCTTGCAGATTATGAGAGTGATACTTTAGATCTGAGAAACCCACAGACGTTCCGTAAGCTTGACAAACCAATGGGATGTCAAACTGAAGGGGGAGAAGAGGAATTCCGTAAGAGGTTCGTTCATCTAACATCAATGGATATACTTATTTTGTTTATTTCTTAATATAAAAGACTATGCCTTTAGGCTGTAGTATTGCTGTACATAAGATAAGAATTTGTGCATCTAACATTATCTGAAATACCTTCTTCTGTTTACTTCAGATATGATAGCTGGGATGACCCTGAAGTACCAAAGTTCCATTATGGTTCTCATTATTCAAGTGCTGGGATTGTCCTTTTCTATCTTTTAAGACTGCCTCCCTTTAGTATGGAAAATCAGAAATTACAGGGTGGACAATTTGACCATGCAGACCGTTTATTCAATAGTGTTAAAGATACATGGGTAAGTGCTGCTGGCAAGAGCAACACATCAGATGTCAAAGAATTGATTCCGGAGTTCTATTATTTGCCTGAATTTTTGGAGAACCAATTTAATCTGGACTTGGGGGAGAAACAGTCCGGAGAGAAGGTATGCTACTTACACAAAAGTGCACTGAACTTTTAACTGGATGTAAATATGTAATGGCAATACTCTTAACCAAACCTATTCAAGCTGCATGTAATCTGTAAAATAATGATTTCAGGTTGGTGATGTTGTTTTGCCGCCTTGGGCTAAAGGTAGCTCCAGAGAGTTCATCAGGAAGCATCGAGAAGCCTTGGAGTCAGACTATGTATCCGAGAATCTGCATCACTGGATAGATCTTATTTTTGGATATAAGCAGAGAGGAAAGGTATAGGCCATCTCATGTTTGTGCATTCTTTATTGTTCCTAATGGTGGTGATATTGCCGTCATCATGACAACATAAATATGTTTGTCTTAAAAACAAGGGTGTTATCTTCTGTTATAGATTCGTATTCCTTCATTTCTGTGGTCCTAGTGGTGGTGACGTTGCCATCGTCATGAGTCCATGACAATTCAGACATGTTTGTAGTTTTTTACAAAGGAAAATGAATTGTGTTTTTTTATAGATTGATAAATTTTGTCCTTTATAGCATCTTACCCATTCAAAACCTCTCAATAGTTTTTTCTAGGTCTTGTTCAGCATTCTAAATTTGTATCATTTTTTACTTTCTCATGGTCTTTCAACTCTGAGCATTGATTTCTACACTGTTTGCCAGAAGTATTTTACATTTGTGAATGTAAACCAGAGTGACTTGTAAAATTGTGACACGAAACAGGGGAAGTTTTCTGCTAATCATATTTATTAACTTGTTCTAATTGTTATTTCTTTTGTATATGGCAGGCAGCTGAAGATGCTGTAAATGTCTTCTATCACTACACGTATGAAGGCAATGTTGACATAGATTCCGTATCAGATCCTACCATGAAAGCTTCGATACTGGCACAAATCAATCATTTTGGTCAGACCCCCAAACAATTATTCCAAAAACCACATCCTCAGAGACGGACTGACAGGAAGGTCCTTCCTCATCCTCTACGGTACAGCGCGTATCTTACACATCAAGAGATTCGGAAGACAACATCATCAGTTTCCCAGATTGTGACCTACAATGATAAGATCCTAATTGCTGCAGCGAACAGCTTTCTCAAGCCAGTAAATTATAGTGAATATATTTCCTGGGGATTTCCTGACCGCAGTTTGAGAATATTGACCTATGATCAGGATAAACTTGTATCAACACATGAAAACCTTCATGGTGGTAGTCAGATTCAGTGCACTGGAGTTAGCCATGACGGCAACATTCTCACAACAGGTGGTGATGATGGTGTAGTTGCAGTATGGAGATTTTTCAAAGATGGCACTCGTCGTCTCCTGAGAATGGAGAAAGCTCTGTGCGCTCACACTGCCAAGATAACATGTATCTATGTGAGCCAGCCTTACTCATTAATTGTCTCTGGCTCCGATGACTGTTCAGTGATCTTGTGGGACCTGACAAGCCTGGCCTTTGTGAAGCAGCTGCCAAGGTTCCCAGCATCAGTGTCTGCGTTACATGTGAACAATCTCACTGGTGAGATCCTGACTGGTGCCGGTGTTCTTTTTGCTGTTTGGAGCGTCAACGGAGACTGTCTTGCTGTGGTTAACACCTCTCAGCTTCCTTCGGATCTCATCTTGTCTGTGGCAAGCACTACAAACTCGGACTGGCAGGACACAAACTGGTACGTGACAGGTCATCAAAGCGGTGCTGTGAAGGTATGGAAGATGGTGCACTACACGTCTGATGAGGCAGCAAACAGCAAGAGCAAATCTCCACCGTCCACCCTTGGAGGGATGAGCTTGAATGGCCAGACTCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009830