BGIOSGA009838

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Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009838| Description = Os03g0742400 protein| Definition = Oryza sativa Indica Group BGIOSGA009838, complete gene.| tag = OS03G0742400| tid ...")
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Gene Name

BGIOSGA009838

Description

Os03g0742400 protein

Definition

Oryza sativa Indica Group BGIOSGA009838, complete gene.

LocusTag

OS03G0742400

Ensembl Transcript ID

BGIOSGA009838-TA

Ensembl Protein ID

BGIOSGA009838-PA

Length

4813

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34667177..34671989

Sequence Coding Region

34671741..34671989,34671273..34671302,34670674..34670788,34669671..34669792,34668844..34668918
,34668172..34668399,34668051..34668095,34667852..34667896,34667742..34667771
,34667351..34667470,34667177..34667263

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34667177..34671989 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34667177..34671989 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCGGCGGTCGTCGTCGCCGGGGAGGCGGCGGCGGCGGCGGGGGCGGGAGGGAAGAAGCGCGGGGCGTCGAGGAGCTGGATCCTGTTCGACGCGGCGGGGGAGGAGCGGGTGCTGGACGCCGACAAGTACGCCATCATGCACCGCGTCGACATCAACGCGCGCGACCTGCGCATCCTCGACCCGCTGCTCTCCTACCCATCCACCATCCTAGGCCGCGAGCGCGCCATCGTCCTCAATCTCGAGCATATCAAGGCGATCATTACTGCTGAAGAGGTTTTGCTCCGGGATCCATTAGATGATAATGTGATTCCTGTAGTAGAGGAGCTCCGGAGACGACTTGCACCTTCAAGTGCCACTCAACATGATGTGGAAGGTGCTGAAGAAGATGAATCTCCCTTTGAATTCCGCGCACTGGAGGTTACTTTGGAAGCCATTTGCAGTTTTCTTGGTGCACGCACTACTGAGCTGGAGAGTGCTGCTTACCCAGCTTTGGATGAACTGACATCCAAGATTAGCAGCCGCAACTTGGATAGGGTGCGGAAGTTAAAAAGTGGTATGACACGATTGAATGCGAGGGTTCAGAAGGTGAGAGATGAACTTGAACAATTATTGGACGATGACGATGACATGGCTGATCTTTACTTGTCCAGAAAGTTGGCTGGGGCAGCTTCCCCTGTCAGTGGCTCTGGTGGACCAAATTGGTTCCCAGCGTCCCCGACTATTGGTTCAAAAATATCAAGAGCAAGCAGAGCCAGTGCCCCAACTATACATGGAAATGAAAATGATGTTGAAGAGCTAGAGATGTTGTTGGAGGCATACTTCATGCAAATTGATGGCACATTAAACAAATTGACAACGCTGAGAGAGTACATTGATGACACAGAAGATTACATTAATATCCAGCTTGACAACCACCGTAATCAGTTAATTCAGCTAGAGCTATTCTTGAGTTCTGGGACCGTATGCCTGTCGCTTTACTCATTGGTTGCCGGAATTTTTGGTATGAACATTCCATACACCTGGAATGACAACCATGGATACGTATTCAAATGGGTGGTTCTCGTGTCAGGACTTTTCTGTGCCTTCATGTTCGTCTCCATTGTTGCGTACGCACGGCACAAGGGCCTCGTCGGGTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAVVVAGEAAAAAGAGGKKRGASRSWILFDAAGEERVLDADKYAIMHRVDINARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPLDDNVIPVVEELRRRLAPSSATQHDVEGAEEDESPFEFRALEVTLEAICSFLGARTTELESAAYPALDELTSKISSRNLDRVRKLKSGMTRLNARVQKVRDELEQLLDDDDDMADLYLSRKLAGAASPVSGSGGPNWFPASPTIGSKISRASRASAPTIHGNENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSLYSLVAGIFGMNIPYTWNDNHGYVFKWVVLVSGLFCAFMFVSIVAYARHKGLVGS</aaseq>

Gene Sequence

<dnaseqindica>1..249#688..717#1202..1316#2198..2319#3072..3146#3591..3818#3895..3939#4094..4138#4219..4248#4520..4639#4727..4813#ATGGCTGCGGCGGTCGTCGTCGCCGGGGAGGCGGCGGCGGCGGCGGGGGCGGGAGGGAAGAAGCGCGGGGCGTCGAGGAGCTGGATCCTGTTCGACGCGGCGGGGGAGGAGCGGGTGCTGGACGCCGACAAGTACGCCATCATGCACCGCGTCGACATCAACGCGCGCGACCTGCGCATCCTCGACCCGCTGCTCTCCTACCCATCCACCATCCTAGGCCGCGAGCGCGCCATCGTCCTCAATCTCGAGGTTCGCGCCCCCCAATCCCCCCGCCCGACTTCATCCGGGATTTTCGGTTCGATATGCGATGGGATCGTGGAGCGCCGGATTCGTGACGGCGAATTCCCGGGAATTATTACCCCCAATTTCGCATGTTTTTTAAGGATTTGTTTTCGGTGGGGCGGATTACGTTGTGATTCATGCTCTGTCTTGCTGTTGCGCGTAGAGTCAAGGTTGTACTAGGTGCACGTACCCGACTGATTCCATGATTGCCTACCTCATCCTCACGAGGACGATTTGATTGAACGGGTTTCTGATCCAAGTGAAGGGAGCTAGCGAATTGATACAGCTGTTTTTTTTTTAATGTTTGAACACTGTATTTTAATGATTATTACGGCTCTATCGTGGTGATTTCTAACGAATTCCGTGTTTCTTCCTGCTGGAATTTTCCTTCGGTGGGTCGAGCAGCATATCAAGGCGATCATTACTGCTGAAGAGGTGATGTTTAATTCCTTTCCCCCTTCTGATTGTTTGTCATGTAAGAAGGTTCCATTTGGGTTGGGGGGGGGGGGGGGGGACTATGTGCACAATTCAACCGTCTCTTCACTTATTGGTTAGCTATCTATAATGTTGAAATTCTCATCAGGTGATTGGGGATTATATACGGATGCAGCACTACTTTGGAGTTTTGTCTCAATTTCTAGGAGTTGCAGGATGCTCAAAGGGGAATGATGCATAGTTTTCTGAACCTATAGCTCCATACAATGCTGATTTTCTAGGCTTCTGTCAGTTTAAGATTAAATTTGTTGCCACTTTGAATAGAGTACAATATTGCAGTTGTCTCAAGTCTGTTTTCTATATAATAAACTAGGGGCTATAGTTTATAATTTATATAGAACTGTGAGGATCTTAAATGTCATTTTCATAGATGCCAAGCGATGCTGGTGGTAACTCACAGTAAATGTTTTTATGCTGTGCTCAGGTTTTGCTCCGGGATCCATTAGATGATAATGTGATTCCTGTAGTAGAGGAGCTCCGGAGACGACTTGCACCTTCAAGTGCCACTCAACATGATGTGGAAGGTGCTGAAGAAGATGGTAAGTTTGGCTTGTGATTCTTTCTGAACTGCTGATGTTCATATTGGCAACACGATTCTGTCTGTATGATGTTTGTTGTGGTAACTTCTAGTATATGTTTCTTCCTTGATGGTGAAATGCCAATACCCTTTTGATGTCAAGGAATTGGACAAAAACAACGCACAACATGTTTTTAAGAAATATGAAAGAATTCAAAAATATTAATTGGCCGCAAAATTCTTTATTGGGTTGCGGCCACACCATCCTGTTGTATTCTTCTTTAATTTGTGTCCTTTTCAGTTGGACATTCAGTTGAACAACGCGACCTGTCACTCCAATAGAAAAGTCCAAAGCATACAGTCATGAAACATAATTATTATTCTGCGATGTCTATTGGACTTTCTTGCACTAGATCAATATATTATGTGTCAGTCTATATTGGGATTTTGTCTTAAACTGAGATTTTGGGATAAATGAAAGAAAATTGAAGGACCCTGATATGGATTCAACTGGATTCACAAGCCATGACTAAATTAACACATCGTGGTGGGCATATAAACACAGAAACTTGAGAATAATAACATTGATCTATCACTATATGAGGACTTTCTGACCCTCTACAGAATAGTATTTGTTTGGTTTAATTTAGTCTACAGTATGTAATACATATTACAATTGATGTGCCATTTTATAACCATAAGTTGATCCCCTTGCATCAAATTGACTTGGAAACTTTCTATCTATCCTATCACTCCATCAATCAACACCGGCTGGTATGCTGATAAAATCCTACCAATGTCTAACAACTGTTGTGGTTGTTTTGATTGTAATATTCTATTTGTTGTTTGTGAACTCCATCAATAGTTTGTTAATATCCCGCAATACAATTTTATGAACTCCAGAATCTCCCTTTGAATTCCGCGCACTGGAGGTTACTTTGGAAGCCATTTGCAGTTTTCTTGGTGCACGCACTACTGAGCTGGAGAGTGCTGCTTACCCAGCTTTGGATGAACTGACATCCAAGGTGACTGAATATATGCTTACCATACTGTATTCCCTTGTTATGAACTTGATTACTCCTAGAAACATGATATGTGTGATTTTATTTGAAGCAACAAGCATAATATGTTAATTGCTAGATGAACTAATTCCCCTTATTTTTCATATGTGAAATAAATATATAATTGGGTACTTGATTGGTAAAATAATGCTTCCACATCATATTTTACTTGTACTATAAACTGTTCAATTACAATTTATAAATCAAATTCTGATTCATAGGTTGTGCTAGTAACATTTTTCAGTAGGAATTTTTGCACAGACTGACCAAATTCATGCCACAGCTGTTACCTTGATTCTTTTCTATAGCTCAAATGTCCATATATGTTTCACCATCCATATAATGCCAGCAACTATGTGATAACTTAAGGTTAAGAAATTATGATATCTTGCAATTTACTGATGTAGTGAGCATATACTTGTCTGAACTTATGCTATTCACAATTTTAGCGGCATAATAGTGTAGTTTGCCCAAGAAGTGGAGTGCTGTATTATTGATTTCCGTTTGTCGCCAAACAAAATTGTAGCTAAAGTTGCATTAAGTAATTGTACGATGAACAGAAGTTACATTTGAGAATTGTATGGCAAATCTTCACAGCTATTCCTTGAAACTTCTATGCTTATCATATAGCCATTATAGGTCTCTTAACTACTTGTTACATTCTCAGCACATCAACTGCATTATGCATACTAACTTGATCTACTACAAACACACAGATTAGCAGCCGCAACTTGGATAGGGTGCGGAAGTTAAAAAGTGGTATGACACGATTGAATGCGAGGGTTCAGAAGGTCTGATTTCTTGGTTTGCTATTTGACACTACTGAGTGCAGTTAATTATCTTTATATTTTTCAGATAATAGTCATGATGTTCACTGTATTTTTATGCCATATTCTCATCTGATTTCTACTTTTGTTGTGAGATTGTTCTGATAATTAGCCATATTAGCTGAAGAATCTGTGCACTTCTGACAGGCATTGCCATGCTTTTATCATTTCTTTGCTATGTCATAGCACGTACATTCTTGTATCCAGGGTTAGTTATTTTATAAACAGAATTAAAGAACCTCAATCATCTAGAAGAGCATTGGTAATATTATATACTATTCTATATTTGACAACATACAGTTCTGCTTTCTATTCTCTTGCATACTTGGTGTGTATCACCCGTTATTTACTAGCTTTTCTTGTTCATGCTTTCCTATTAGATCACAAAATGTTTGTTTTCTTTGCCAGGTGAGAGATGAACTTGAACAATTATTGGACGATGACGATGACATGGCTGATCTTTACTTGTCCAGAAAGTTGGCTGGGGCAGCTTCCCCTGTCAGTGGCTCTGGTGGACCAAATTGGTTCCCAGCGTCCCCGACTATTGGTTCAAAAATATCAAGAGCAAGCAGAGCCAGTGCCCCAACTATACATGGAAATGAAAATGATGTTGAAGAGCTAGAGATGTTGTTGGAGGTCTTTTTTGTTTTTCTGCATCACAATGTCTTGTCATTCTCTGGCTGAGATACTAAAAGTTTCTTTAAATTTGCAGGCATACTTCATGCAAATTGATGGCACATTAAACAAATTGACAACGGTAAGTTGAGGCAGCTAAGTCGAATTTACAATATCAAAATGGGCTAGCAAAACATGGCCTAAGGCTTTTGTTTACAACACAACATCGTTGAAAATTAATAGTACTCTAGGCTTTCACCCTTTGCTGACTGTATTTGTCTGCTATACTGTTTCAGCTGAGAGAGTACATTGATGACACAGAAGATTACATTAATATCCAGGTAACATTTCCCTATGATATAGCTGTGCACGGCATGCTGATCTTTTAATCTTGGCACTCACCTCATTACCTCTCGTGCAGCTTGACAACCACCGTAATCAGTTAATTCAGGTAATTTCTGAACTACAAGACCTCATGATTCTCTCTTCTTAAGTGCAAATTCCACAAAAATAGAATTGATTTCAAACTAGCATGCTGTTAAACCCACACTGAAATAAGCTAAATGTTTCATAAAACTTGGTTACCATTGATTCAGCTGATTGTGCTATTCTAGTTAGTAATGCTTGCAAGTATAAATTCTAGTAGTTATATAAATACTCTGTCATTGTGCCTCCCGACTTTCTGCAACAGTAATATAACTTGGATTTGCTTCTTCCTGCAGCTAGAGCTATTCTTGAGTTCTGGGACCGTATGCCTGTCGCTTTACTCATTGGTTGCCGGAATTTTTGGTATGAACATTCCATACACCTGGAATGACAACCATGGATACGTATTCAAATGGGTAAGTCAACCATTACAAAAGGGTCGTTTACCGTCAATAAATTGTGGCCTGTCTAACCAAGCTGTAAACTTTGTTCCTGCGTCACAGGTGGTTCTCGTGTCAGGACTTTTCTGTGCCTTCATGTTCGTCTCCATTGTTGCGTACGCACGGCACAAGGGCCTCGTCGGGTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009838