BGIOSGA009842

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Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009842| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009842, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009842

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009842, complete gene.

LocusTag

OSJNBB0016H12.28

Ensembl Transcript ID

BGIOSGA009842-TA

Ensembl Protein ID

BGIOSGA009842-PA

Length

2860

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34471830..34474689

Sequence Coding Region

34474558..34474689,34474275..34474460,34474053..34474150,34473552..34473642,34473279..34473479
,34472938..34473194,34472423..34472513,34472126..34472339,34471830..34472044

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34471830..34474689 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34471830..34474689 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGGCGAGCAGCCACCCGCCGCGGCGGCGGCGGAGGCCGCCGCGGCAGCAGAGCAGCAGGCCGGCAGCGGCGGCGGAGGGGGATGGGGAGGGTGGGGGCTCTCCATCTTCTCCGAGATATCCCGCAATGCGGTGGAGGTCGCGAAGAGCGCCATCGCCGACATACAGCAGCCGCCGGAGCAGGACGTGGGGACCGGAGACGGGGAGGAGAAGGAGAAGGAGAAGGCGGCCGAGGGAGGAGGGGAGGAGGACGAGCGGCGGAAGGCGGCGCTGGACAAGCTGGAGAACGCCAGCGAGGACTCGCTCTTGGGACAGGGGCTCAAGGTGTTCGACAGCTCGGTGGAGACTATCACGACTGGGACATGGCAAGCGCTCGGGAGTGCGTGGAAGAGCGGATCACTGCTTGTTCAGAAATTGGAGACTTCTGCTTCAAGCCTTGCTGAAACCATTCAACAAGGGGAACTGCCTGCTAAAGCATCTGTAATAGCACCAACCATTCTAGAGACAGGGAAGTCATTTACTGCCAAAGGAATGGAGGTACTTGAACGTGTAGGAAAAGAGACAATGGAGTTTATCATCGAAGAGACTGGTATGGATGTTGACAAAGGTACTGGTGAAGGTGATCCGCAGACAGAAGAGGAGCAGTTTGAAGAAGTGTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGATCAATTAGAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAAGGGTAAACTTGTTGCTGAGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACAGATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAAGATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGTTAGCAAGGCTGCAAAAATGGCTGCAGGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAATGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACAGATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTTCTGCTGCTTGGAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTGCTACAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATAA</cdnaseq>

Protein Sequence

<aaseq>MSGEQPPAAAAAEAAAAAEQQAGSGGGGGWGGWGLSIFSEISRNAVEVAKSAIADIQQPPEQDVGTGDGEEKEKEKAAEGGGEEDERRKAALDKLENASEDSLLGQGLKVFDSSVETITTGTWQALGSAWKSGSLLVQKLETSASSLAETIQQGELPAKASVIAPTILETGKSFTAKGMEVLERVGKETMEFIIEETGMDVDKGTGEGDPQTEEEQFEEVSFDRCFYIYGGPDQLEELEALSSHYALLFNRKKGKLVAEQKTYYDGKLKEIQQIFSLSTKIDEDGPDSNKGKKIEAADSDSDAEMKKLCDSSVSKAAKMAAGFTTALGGLSPNEIVKRTTNRLETIHSEGVHRLSEMCCLAVSQLLLLGKSVISASSKPKNEDDENDVKIEWPEDPISKAKIIRWKAQSISVDIEKVSASFATGISDVAEAYMAAIQNALADKKDDLSNQNSVQEKAKYISNHLNTDQTSAVSKLQDALQYLAYVVVCSSMPSV</aaseq>

Gene Sequence

<dnaseqindica>1..132#230..415#540..637#1048..1138#1211..1411#1496..1752#2177..2267#2351..2564#2646..2860#ATGTCCGGCGAGCAGCCACCCGCCGCGGCGGCGGCGGAGGCCGCCGCGGCAGCAGAGCAGCAGGCCGGCAGCGGCGGCGGAGGGGGATGGGGAGGGTGGGGGCTCTCCATCTTCTCCGAGATATCCCGCAATGTGCGCGCCGCTCTCCCGGCTTCCTGCTTCGCGCGCGCCGCCGTTTTCGCTAGGGTTTTTTTTTTTTGTTTCTGATGTGGTGTGGCGTGTGACGCAGGCGGTGGAGGTCGCGAAGAGCGCCATCGCCGACATACAGCAGCCGCCGGAGCAGGACGTGGGGACCGGAGACGGGGAGGAGAAGGAGAAGGAGAAGGCGGCCGAGGGAGGAGGGGAGGAGGACGAGCGGCGGAAGGCGGCGCTGGACAAGCTGGAGAACGCCAGCGAGGACTCGCTCTTGGGACAGGCTAGTTGTACTACCACCTTTGCTGTTCCTTTCTCCTCGGCAATGCCGGCGATGGGGTCCGATGGGTTTGGGGATAGTGGTGGTTAATGTGGTTGTTTGGGATGTTTGTGTTGGGGCTCTGCAGGGGCTCAAGGTGTTCGACAGCTCGGTGGAGACTATCACGACTGGGACATGGCAAGCGCTCGGGAGTGCGTGGAAGAGCGGATCACTGCTTGTTCAGAAGTATAGCACTCTTCTTAACTCCATTTCTCTTCCTGCTGTGATGCCTTGAGTGGATATTAGAACCAGCTAGCATATCTGTGCTGAATAGGAGTACTTAATAGTTAATACAGCATGTAGAACAGCTGAAGAAGTATGCGATAAATCCGTCACAATATTAGATCCTTTGGATGATGTAAAAAATTGTCGATCCACTGAAAATGCAGTGTGGTGAAGGGATTCCAAATGCGATACTTTTATTGAAGAAACATTTCTATTTTCTGTATGGATCATCTTGCACTATAAGTATTTCAAGTTTCTTTCAATGCTGAAATAGTTAGTAATGTTTTCGTTATCAACAATGCTGCATCTTTACTTGAGGTAGAAACATTTCAGCATCATTGCGTTTTTATATAATATTGTTACTTTCCTAGATTGGAGACTTCTGCTTCAAGCCTTGCTGAAACCATTCAACAAGGGGAACTGCCTGCTAAAGCATCTGTAATAGCACCAACCATTCTAGAGGTAATTCAGTAATAATGTTTATTCGGCACATCTACGGGTATCATTTTAATAATAAAGCCTCAATAATTACAGACAGGGAAGTCATTTACTGCCAAAGGAATGGAGGTACTTGAACGTGTAGGAAAAGAGACAATGGAGTTTATCATCGAAGAGACTGGTATGGATGTTGACAAAGGTACTGGTGAAGGTGATCCGCAGACAGAAGAGGAGCAGTTTGAAGAAGTGTCATTTGACAGATGCTTCTATATTTATGGAGGACCTGATCAATTAGAGGTCCCCCTTTTCACAAGATCTCAATTTGTTTTGTTGCCAATATTTGTTCCTTTTTTTTACTTGGTCATGGCTGTCTTTTACTAGGAGTTGGAGGCACTGTCAAGCCATTATGCACTATTATTTAATAGGAAGAAGGGTAAACTTGTTGCTGAGCAGAAAACATATTATGATGGAAAGCTCAAAGAAATACAACAGATTTTTAGTCTTAGCACCAAGATTGATGAAGATGGACCAGACTCTAACAAAGGAAAAAAGATTGAAGCAGCTGATTCTGATTCTGATGCAGAGATGAAGAAGTTATGCGACTCAAGTGTTAGCAAGGCTGCAAAAATGGCTGCAGGGTAGGTGTAACTCCATTTTGCATCGTCAATCATCCAATGCACAAACTCATATTCTACAAGATCTGACAGGCATATGCAACTGATATGGACTGGTTTCTTACTGAAATGCTAGTTAGTGACAATGCTAAATGAAGAATATAAGTGCGGCTAATACTAGAGCATCATGCTAAAACCTTTAAGAAGTATTACTCAGGATTATGAAGTAAACATATTAGTCATGCTGAGACAGCAATTACTCCTACATATTGAGAAAATTCATATGCATGTGTGGAAGCAACATCCATGTTTAACTGTTTTGCAGCCATGCAGTGTACTGTCTGACTATAAGCTCAGTTTTACCTCTGTAAAGCATCTTCAAGCACTTGAATTTTATCCTCCAACGTTATTTTTCTAAAGCTTTACATACTGACATTTGTCTTCTCAGGTTCACCACTGCCTTGGGCGGGCTCTCTCCAAATGAGATTGTCAAACGGACCACTAATAGGCTAGAGACTATTCACTCGGAGGGTGTTCACGTACGTCCATATTGAATAATGTTCAGTTGTTTATCCTTGCTCTTTGAACTATACATTTTGCTTATAAAAATTTCCTGTCGCAGAGATTGTCAGAAATGTGTTGCCTTGCAGTCTCTCAACTTCTGCTGCTTGGAAAATCTGTTATTTCGGCTTCTTCTAAACCAAAGAATGAAGATGATGAAAATGATGTGAAAATTGAATGGCCTGAAGATCCTATTTCAAAGGCTAAAATCATCAGATGGAAAGCACAGTCCATCTCCGTGGATATTGAAAAGGTGTCTGCAAGTTTTGCTACAGGTACATGTAATGGTCTTCTTGTGATTATATAATGCACGGCACGAACTTAGTTTTAACAAGTTCATCTTATTGTTTTCGTAGGAATATCCGATGTTGCTGAAGCTTACATGGCAGCTATACAAAATGCTCTGGCTGACAAGAAGGATGATCTCTCGAACCAAAATTCGGTGCAGGAGAAAGCTAAATACATATCCAACCATCTAAATACCGATCAGACCAGTGCTGTCAGCAAGTTGCAAGACGCCCTCCAATACTTGGCCTATGTTGTTGTTTGCTCTTCAATGCCAAGTGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009842