BGIOSGA009847

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Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009847| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009847, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009847

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009847, complete gene.

LocusTag

OSJNBB0016H12.19

Ensembl Transcript ID

BGIOSGA009847-TA

Ensembl Protein ID

BGIOSGA009847-PA

Length

2331

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34415884..34418214

Sequence Coding Region

34418182..34418214,34417571..34417620,34417035..34417293,34416877..34416958,34416431..34416504
,34416121..34416181,34415884..34416026

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34415884..34418214 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34415884..34418214 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCATTTCGCTGGTCATTCAACACATTTTGCATCCGGACTTCCAGAGTTCTAGCCAGGCACATGACTTTGTTGGAGTCAAAATGCAACGGGCAATTCAAGCTATCGGGTCACATGGCAGTCTCCTCAAGTCTGCTGTTCTGCGACACATCAGTGCTCCAAAACCATCTATTTTACCTGCTGTATATTCACGCTCCATGTCAGTTTCATCTGCTCAAATAGAGGAGAGTGGATTTGAGACTGCCACTGTGGCAGATATTTTGAAGTCTAAGGGGAAGAGTGCTGATGGATCTTGGCTCTGGTGCACTACTGATGACTCTGTCTATGATGCTGTCAAATCTATGACGCAACACAATGTTGGAGCTCTGGTGGTTGTTAAACCTGGACAGGATAAATCAATTGCTGGTATTGTTACTGAGAGAGATTACCTCAGGAAAATCATAGTGCAGGGACGATCTTCCAAGTCAACTAAAGTTGGAGACATCATGACTGAAGAGAACCAGCTGATCACGGTGAAGCCTGATACCAGAGTCCTGCAAGCAATGCAGCTGATGACAGAGAAGCGCATCAGGCACATCCCGGTGATCGACGGCACGGGCATGGTTGGGATGGTCTCCATTGGAGACATTGTCCGCGCCGTGGTCAGCGAGCACCGGGAAGAGCTGAACCGGCTCAACGCCTACATCCAGGGTGGCTACTAG</cdnaseq>

Protein Sequence

<aaseq>MTISLVIQHILHPDFQSSSQAHDFVGVKMQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADILKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIGDIVRAVVSEHREELNRLNAYIQGGY</aaseq>

Gene Sequence

<dnaseqindica>1..33#595..644#922..1180#1257..1338#1711..1784#2034..2094#2189..2331#ATGACCATTTCGCTGGTCATTCAACACATTTTGGTGCGTACATTGCTTTGTTCTAGCAGTATTTTTGCTGACCAGTGTACAAAATGGTAGGCTAGAGCTATAATGCTTTACATCCTTTTCATTGCATCAGCGCAGTGGAAATTAACTTCCACTTGACATAATGCTCCCAGGCCCCATCAGGATTGGTGTGGGGTTGTTTATTTATGTGGAATAGTTTGAGAACTATATTGTTTTTTAAGTAATTCCACTTGTACAGACTTTCTTGTTGCTTTCTTACCAGTCCTTTATACTGAAACTGATTGTCCGGTCATTCTAGCAGTCACCTGCATTACAACGGAAATTGATTTGCAACAACTCTGTCTCGGACAAGCAAAAAAAAAAAATCCATGGGAAGAGGAGCCCTTTTTTCGTTTGAATTATTCCAAATACCAACTTATTTACTTGAAATCCAAAAAATCAGGAAGAAAAAAGAGAGAGTAGCAAACAGTTTATTACACGAATGTCCAGTCTTTTCTTGCTGCTTTTTCTGGTGCTTTTTTATTGATCAACTGCCATGATATAATTAGTAACTAGTCTCTTTGCCTTCAACAACAGCATCCGGACTTCCAGAGTTCTAGCCAGGCACATGACTTTGTTGGAGTCAAGTAATTGGTCATACCTTAATTTAGATTGATGAACTTTCGGTTGCTTTTGGTTCTTCTCTGTGTTGTATTTGAGATAATTTTGCAGTATTGTTCAAATTTTAAACTCTTAAGTCATCCAAGACATCTTTATTCTCACGAGTTCTTTGCTATCTGTAGTTCTATATACTCTTTTATCATTAGCCAAAAAAGAAGTGAAATAATAAGAAGTTATAAGTCAGATATTTTCTTTGTTCAAAATGGAGTAATCATGTCTTTTGATATGTTTGATCTGGCACAGAATGCAACGGGCAATTCAAGCTATCGGGTCACATGGCAGTCTCCTCAAGTCTGCTGTTCTGCGACACATCAGTGCTCCAAAACCATCTATTTTACCTGCTGTATATTCACGCTCCATGTCAGTTTCATCTGCTCAAATAGAGGAGAGTGGATTTGAGACTGCCACTGTGGCAGATATTTTGAAGTCTAAGGGGAAGAGTGCTGATGGATCTTGGCTCTGGTGCACTACTGATGACTCTGTCTATGATGCTGTCAAATCTGTATGTGTCTTCTCCTTCTCATATTACCTCTTAAGTGAACAGTTATGCTTCAACATGATAAAGTTTCTTCTATCAGATGACGCAACACAATGTTGGAGCTCTGGTGGTTGTTAAACCTGGACAGGATAAATCAATTGCTGGTATTGTTACTGAGAGAGGTAACAAGCCACCATGTGTATTTATTTTGTCTCTAGCCACTGGGTCTGTAATTCAAAAACACAATCATATGCTAGAAGACAGACTATTGCTTAATTCAGTTGTAAAAAAGAGATACTAGTGCATGAAGCTGGCTTTAGAAAAGAAAGAGTTTAAACAGTACATGCAAAGTTACATTGAAATGTTTGGACTAATAAAGAAGATAAAAAACAATCAATACATGGTCAGACAGACAGACACAGTGTTCATGTGAATGGTACCAACCCTTACGGTCAAAAACACAACAGAAAATCTTTACTTGTTTATAAACATGATTGGCTTAGAAAGTACTTGTGTTGCGTAACTAACACCTGAATCATGCTCTATGTTTCCAGATTACCTCAGGAAAATCATAGTGCAGGGACGATCTTCCAAGTCAACTAAAGTTGGAGACATCATGACTGAAGAGGTACACCCCTTGTTATGCTAATTTTCTTTTAGGCTGTATCCGTCGGTCATGGTGGTGGAAATACACCCTGAATCTGATTAGTACAGAGGCTAAGTCGTAAGCATGAAAAAGTTAGTCAGTTGACAAACTTGGTTGCCAAAACTATTAACATTCTATACTCTGGTTTTAGTTTTAACAAAATATTAAAATGCGACCAGAGTATTGACTGTTCTACAACGAACGTTCATTGACAAAACATCATTTCGACAGAACCAGCTGATCACGGTGAAGCCTGATACCAGAGTCCTGCAAGCAATGCAGCTGATGACAGGTAAAACATCTTTGATCTTTCTCCGATTCAGTACCTGAAACAGAAAGTTCAGATAGCAATTGCTAACACCGGTGTTGCCGATCTCCGTGTGCAGAGAAGCGCATCAGGCACATCCCGGTGATCGACGGCACGGGCATGGTTGGGATGGTCTCCATTGGAGACATTGTCCGCGCCGTGGTCAGCGAGCACCGGGAAGAGCTGAACCGGCTCAACGCCTACATCCAGGGTGGCTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009847