BGIOSGA009857

From RiceWiki
Revision as of 09:07, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009857| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009857, complete gene.| tag = OsI_134...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009857

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009857, complete gene.

LocusTag

OsI_13417

Ensembl Transcript ID

BGIOSGA009857-TA

Ensembl Protein ID

BGIOSGA009857-PA

Length

4194

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34304708..34308901

Sequence Coding Region

34308769..34308901,34308600..34308679,34307819..34307895,34307486..34307579,34307131..34307224
,34306743..34306816,34306006..34306116,34305522..34305560,34305229..34305296
,34304708..34304840

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34304708..34308901 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34304708..34308901 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGGGGGCCTCGCCGCCGGCGTCGGCGGAGGCCTGGACGTGGGAGAACGCCGCCGCAGGAGCGGCCGCCGGCTTCGCCACCGTCGCGACCCTCCACCCGCTCGACGTCGTCCGCACCCGTTTCCAAGTGAGCGGCGGGAGGGGATGCTACGACTTGCCGCCGTACAGGAACACTGCGCACGCTGTGTACACCATCGCGCGATCTGAGGGTCTGAGAGGACTTTATGCGGGATTTTATCCAGCAGTTCTTGGATCAACTGTTTCCTGGGGGCTATATTTCTTTTTTTATAACAGAGCTAAACAAAGATACTTACAAGGGAAAGATGATCAGCTCCGTCCAGTTCACCATCTTGTCTCAGCTGCAGAAGCAGGTGCTTTGGTTTGCCTATTCACAAACCCTATATGGCTGGTTAAAACAAGACTGCAATTACAAACGCCTAGTCATCATACTTCACGATATTCTGGATTTTCTGATGCTTTGAGAACTATTCTGAAAGAGGAGGGATGGCTTGCGCTTTACAGAGGGATTGGACCTGGGCTTTTGCTGGTTACTCATGGAGCGATACAGTTCACGGCCTATGAGGAACTTCGCAAAGCTTTGATATTTGCCAAAAGTAGACAGACAAGAACAGACAACAGAAGCTGCGATGATTCCTTGAATTCCATTGATTATGCGGCACTTGGGGCTGGTTCGAAACAACGACCTGGTAGTGATGGCACTCCAAAGTACAAAGATAGCTGGCATGTAGTGAAAGAAACTGCAAGGCATGAAGGTGTCCGTGGATTTTACAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAA</cdnaseq>

Protein Sequence

<aaseq>MPPGASPPASAEAWTWENAAAGAAAGFATVATLHPLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLGSTVSWGLYFFFYNRAKQRYLQGKDDQLRPVHHLVSAAEAGALVCLFTNPIWLVKTRLQLQTPSHHTSRYSGFSDALRTILKEEGWLALYRGIGPGLLLVTHGAIQFTAYEELRKALIFAKSRQTRTDNRSCDDSLNSIDYAALGAGSKQRPGSDGTPKYKDSWHVVKETARHEGVRGFYRGITSNLLKNLPAASLTFVVYENVIKLFKAAKEKT</aaseq>

Gene Sequence

<dnaseqindica>1..133#223..302#1007..1083#1323..1416#1678..1771#2086..2159#2786..2896#3342..3380#3606..3673#4062..4194#ATGCCGCCGGGGGCCTCGCCGCCGGCGTCGGCGGAGGCCTGGACGTGGGAGAACGCCGCCGCAGGAGCGGCCGCCGGCTTCGCCACCGTCGCGACCCTCCACCCGCTCGACGTCGTCCGCACCCGTTTCCAAGGTAAACCCAACCCCCCACGGGCGTTCGAACCCTAGGAGGAGACGCGGGAGGCCTGGTCGGTAACCCTGCGTCTGCGTGTGGATGTGCAGTGAGCGGCGGGAGGGGATGCTACGACTTGCCGCCGTACAGGAACACTGCGCACGCTGTGTACACCATCGCGCGATCTGAGGTGTGGATTCCTGTTGCATATCGTTCTGTTCGGTTGGTGGGATGCATTAGAGTCGCGGTCCATCTTTAGGTTTGTCGATGTTAACAATTTTTTTCCAGGTTTATTTGTTCGCTTAGTGAAAAGAAAATTGCTGGTTCCCACAAAACCGGAAACAACTTGCCCATATATGAGTCAGATTACTTAATGTTCTTTAGAAATATTCTAACCAGGTTGAAAAATGTAGTTTCACTTTAAAAATAAACTCTACGTTGTTGAGCTTGTGCTTGAATACGTTTGTAGAGAGCAGATATTACATATGTACATATATACAATAATGTGAATTGTGAAACTTTGAGTATGAGCAAATCAAATGGTGGTCTTCTTTGGTTGAGATGTATAGATGTTTGTGTTTAAAGAACTCTTGCTTGTTAATAATTAGCAGTTCTACATGGATATGTTCACTTTCAAAATGTTCTCTGATAGCGCCTGCGGGTATAGGTTCCTAGTATGAGGTTAAAATGCGGTGGAAGGTTGCTAGGTTGAGACATCGTCTACTTAAAAGGTTGAGATGTTACAGTCTCCTTAAAATACTAAATGATGGAAATCCCTATTGCTATCACTTGGTATCTGTGAACTGTTGTAAGAATTGAAAGAATGTGGTTCTTTCGCTTCTAAGTTTTTGGTATGCGAAGTTGAGCTTCACTGATTGAGTTGGCTATTTGTAGGGTCTGAGAGGACTTTATGCGGGATTTTATCCAGCAGTTCTTGGATCAACTGTTTCCTGGGGGCTATATTTCTTTTTGTAAGTTATATAAATTCGTTTTATTTGAATAATTATTGTGTAGTAAGATAATGATCTGTCTGTATCTTAAATGCTGAAGTAAATTGCATATTTCAGGATTTAAGTTCACTTGGTTCTCCTATCTAATTATTTCATCTTGCTGGGTGCTGACTCCAATTTGGACGATCCTTGTTTACCCATTTGAATTCTCTTTACTATATTACCTGCATTTTGGCTGACTTGAAGATCTATTATGACAGTTATAACAGAGCTAAACAAAGATACTTACAAGGGAAAGATGATCAGCTCCGTCCAGTTCACCATCTTGTCTCAGCTGCAGAAGCAGGTGCTTTGGTTCGTACAGTAACTTTTGTCCTTTCAAGAAAAATGTTAATATCATTGGATTATATCTAAGATAAGTTTACTGAATGTTGAGCAAGATCTTAGCGTCACTATTATTAAGTTATTTAAAGTTTAAATTCAATTGGTGGTGCTCTTATGGCATGCATAACCTTAGCATTTTTTTCAAATTACTAACATTTGTTAATGTTATTACTTATCACTTAATACTTATGTCGTATTTTGTTATTTAAACATTATTTGTTCATTATACAGGTTTGCCTATTCACAAACCCTATATGGCTGGTTAAAACAAGACTGCAATTACAAACGCCTAGTCATCATACTTCACGATATTCTGGATTTTCTGGTAATGTTTGCTTTCTTCAATGCTTCTCTGGTAAAGAAGTACTCGTAGTTATGCTCAAGGTTTATAACAGTGTGGTTGGCAAGTGTAAATTCCAATAATATTACATCAAATAATGAATTATGCCCCGTGCTCATCCTCAGCTCTCGCAGAAGCTGCTGTTTTGAAGCAATTATTCAAACCAAATGAAATTCTTTCCACTAATGACTGATGCGTCTTGTTGTTGTTTTTGGTCTCAATTGTTGTTCATATTTCCTTTGCTAAATATTTTATCTTAATTTTGTATGACTTTGCTTATTTGATCGCTGTAAGGCCAGATGCTTTGAGAACTATTCTGAAAGAGGAGGGATGGCTTGCGCTTTACAGAGGGATTGGACCTGGGCTTTTGCTGGTATGTGTTTTTTTCCTGTTGTTTATTCATCTTTACGTTATAGTCCTACAAACATACTCATGATTATAACCACACAAGGCTTAGTGTAATTTTAAATATGGAAGGGCAGTTGAGTGTAGTGTTTCTTTGGTGTGTGGTACATAGCTATGAAATTATGTTTCTAAACAAAGTGCTGAATTTATTATTAACAGTCATTGTGGTATGAATTCGATAATTTTGGTGCAAAACTGCACCTAAATATCATCCTCAGTTTTTTTGTCTGATGATTGATTGATCTAATTTATCTGTAAATACTCTAGGTAATATCATCTTGTGATGCTGTTAACTGGATGATATGTTTTTGTAACTGTAGTGTTGTACCATGTTTAGTTATGTGTTTTTCTCACTGCTACCATGATGTGAACATCGTGATGCTTGGTATGCCAGTCAATATCACAATTCCTCGGTTTTGCTGGAAATTCTCTTCGCTTGTATTCCTTAATGAATTCCCAGGGCTTTTACCATTACATATTTTTAAACTGCCAAACTAGGGTTGATGCCTATGGTCATTTTAATTAACCAGGATCTGACATGGTTGGCAAATCTAATACATTACTTGATGCTTTCTATTGTTTCATGCATGAAAGGTTACTCATGGAGCGATACAGTTCACGGCCTATGAGGAACTTCGCAAAGCTTTGATATTTGCCAAAAGTAGACAGACAAGAACAGACAACAGAAGCTGCGATGATTCCTTGGTAAATACTGATCAAATGTTTGCTTGTGCTTTACACATCTACCCTCGTTGGTGCAATAACGGAGCACTACTGTCAACCTTAATTTAGTTCTGAACTTTAATTTCTTTTAATAAAAAACTGGGATTCAGATACTAATTCTGATTACCCATTCGTGGCACTGTATACATTTTGCATATCCTTACTCTTATACTGATTGTCACTTGCCTTTTAACAGTTGGGTCACCATATAGAAATGGAATTTAAAATTAATCAAAATGTTAGTGTTTTACAGTGTTATTTTTAGAAATTGCACTTTCAGACAGGTGCAATGCACTCGTTCACTCAGAAAGACAAATTTTTAGAACATTTTGTCCCACTTATCTCTATGTCAAAAATTGAAAATACATCCTCATCTGGTAGATAGATTCATACTGCACCTGATATGCACTGATTTCGTTCTTGACAGAATTCCATTGATTATGCGGCACTTGGGGCTGGTTCGAAAGTAACTGCCATTCTGCTTACTTATCCTTACCAGGCATATTCTTTCACTCTTCTTATTCTCATAAACTCACCCGTATATCCTGATTTTTTACTGAACCTAACAGCTGAAAGTCATCGTATTTTGCAGGTCATCCGAGCACGCTTGCAGGTTGCATATTTGAATCTTCTTACTCCCATTCCATCTCTCTAGAGTCCTCATCAATAATAATTATGTGTAATTTTGCAGCAACGACCTGGTAGTGATGGCACTCCAAAGTACAAAGATAGCTGGCATGTAGTGAAAGAAACTGCAAGGTGATAATTTTACTATTAACGTTAACACAGATGGAACCTTTTCTTTTCTATTGTGCTGTATGCAACAGTTAGAATTGCAGAGTTGAAGTTGTATACAGTAGATGGGATTTCTGTGGGTTTTTTACCTCCCCCCCCCCCAACACACACACACACACACACACACACACACAGATATGCCTAATCTCTATGCTATTTCCAATCTGTGCACACCAAATATTAGAATTTGTAACTCAGATGTCTGCTACATAGTTTAAAATTAAAGTAGACTATATGCGATTTTTTTTCTGAATTCCTTTTCTGGTCTTCTCCTGCACATAACCAGTGCTTTGACTGTAACATGTTCCAAACCAAGTATCCCTGCTCTTTGGATTGACAAATTCGTTTTCAGGCATGAAGGTGTCCGTGGATTTTACAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009857