BGIOSGA009868

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Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009868| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009868, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009868

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009868, complete gene.

LocusTag

OSJNBA0079G12.18

Ensembl Transcript ID

BGIOSGA009868-TA

Ensembl Protein ID

BGIOSGA009868-PA

Length

2755

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34166502..34169256

Sequence Coding Region

34169001..34169256,34168720..34168916,34168131..34168310,34167897..34168028,34167727..34167801
,34167527..34167632,34167313..34167407,34166962..34167147,34166689..34166775
,34166502..34166567

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34166502..34169256 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34166502..34169256 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCATCACCACGCAGCTCCGGTCGGCCCTCCTCTCGCCGGCGGCCTCGCCGAGCCGCCGTGCCAGGCGCGCCCCGTCGTCCGTGCGGTGCGACTCCTCGGCAGCGTCGTCCCCGTCCGCCTCCGCGTCGCTCGACGCCGACTTCGACAAGAAGCAGTTCCGCCACAACCTCACCCGCAGCGACAACTACAACCGCAAGGGCTTCGGCCACAAGAAGGAGACGCTCGAGCTCATGAGCCAGGAGTACACCAGCGACGTGATCAAGACGCTCAAGGAGAACGGGAACCAGCACACGTGGGGCCCCGTGACGGTGAAGCTGGCGGAGGCGTACGGCTTCTGCTGGGGCGTCGAGCGCGCCGTGCAGATCGCCTACGAGGCGCGCAAGCAGTTCCCCGACGATCGCATCTGGCTCACCAACGAGATCATCCACAACCCCACCGTCAACAAGCGATTGGAGGACATGGGCGTCCAAAACATTCCTGTTGATGCAGGTATTAAGGATTTCGATGTTGTCGAGCAAGGGGATGTTGTCGTATTGCCTGCATTTGGAGCGGCCGTGGAGGAGATGTACACGCTGAATGAGAAGAAGGTGCAGATAGTCGATACAACGTGCCCTTGGGTTTCAAAGGTGTGGAACATGGTTGAAAAGCACAAGAAGGGTGACTACACTTCTATTATTCATGGAAAATACTCCCATGAAGAAACTGTTGCCACTGCTTCCTTTGCAGGGACATACATCATTGTTAAGAACATAGCAGAGGCTAGCTATGTATGTGATTATATACTTGGTGGCCAACTTGATGGTTCTAGCTCCACAAAAGAGGAGTTCCTTGAGAAATTCAAAAATGCTGTTTCTCCAGGATTTGATCCTGATGTTGACTTAGTGAAAGTTGGCATTGCCAATCAAACAACAATGCTTAAAGGAGAAACTGAAGAAATTGGGAAGCTTGTTGAGAAGACAATGATGCGTAGGTTTGGAGTTGAGAATGTCAATGACCACTTCATTGCCTTCAACACTATCTGTGATGCCACACAGGAAAGACAAGATGCAATGTACCAGCTAGTGAAGGAGAAAGTTGATCTTATTCTGGTTATTGGAGGATGGAACTCCAGTAACACCTCTCATTTGCAAGAAATTGGAGAACTCAGTGGAATTCCGTCTTACTGGATTGACAGTGAACAAAGGATTGGACCTGGAAACAAGATCAGCTACAAGTTAAATCATGGCGAGCTTGTCGAGAAAGAGAACTGGTTACCAGAAGGCCCTATCACAATCGGAGTTACTTCTGGCGCCTCAACTCCGGACAAGGTTGTTGAGGATGCGTTACAGAAGGTGTTTGAGATCAAGCGCCAGGAAGTTTTGCAGGCCGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MATITTQLRSALLSPAASPSRRARRAPSSVRCDSSAASSPSASASLDADFDKKQFRHNLTRSDNYNRKGFGHKKETLELMSQEYTSDVIKTLKENGNQHTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPAFGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASFAGTYIIVKNIAEASYVCDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDLILVIGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEGPITIGVTSGASTPDKVVEDALQKVFEIKRQEVLQAA</aaseq>

Gene Sequence

<dnaseqindica>1..256#341..537#947..1126#1229..1360#1456..1530#1625..1730#1850..1944#2110..2295#2482..2568#2690..2755#ATGGCGACCATCACCACGCAGCTCCGGTCGGCCCTCCTCTCGCCGGCGGCCTCGCCGAGCCGCCGTGCCAGGCGCGCCCCGTCGTCCGTGCGGTGCGACTCCTCGGCAGCGTCGTCCCCGTCCGCCTCCGCGTCGCTCGACGCCGACTTCGACAAGAAGCAGTTCCGCCACAACCTCACCCGCAGCGACAACTACAACCGCAAGGGCTTCGGCCACAAGAAGGAGACGCTCGAGCTCATGAGCCAGGAGTACACCAGTATGATTTCCTCTCCTTTCCCTTTCTTTTTTTTTTCTCTTCTTGATTGGGGGCTCACCGGCGGCGGCGTGTTCTTGGTCTCAGGCGACGTGATCAAGACGCTCAAGGAGAACGGGAACCAGCACACGTGGGGCCCCGTGACGGTGAAGCTGGCGGAGGCGTACGGCTTCTGCTGGGGCGTCGAGCGCGCCGTGCAGATCGCCTACGAGGCGCGCAAGCAGTTCCCCGACGATCGCATCTGGCTCACCAACGAGATCATCCACAACCCCACCGTCAACAAGGTGATTATGAAATCCTCCCCTATCCATTTCGTTTGATTCAGGCGTCGACTCGTCTCCATGGGGATGAATTTTGTGGTTTTTCCCCTTCGTGAATGCCCGCCTCCTTCCACGAACTGAGTTTGTTGCGTATGAGGGGATAGATTAGCGTCTGCGTGTGCGTGGTAAAATGATCTATTTGGTGCAAATGAGATTTGGAGTAAAATCCTACCAATTTCTAGTTGAGAAAGTGTTCACAGCGAAGAGTGGCCACCAGATTCTGCGTTTTAGACTTTTATACCCCCTTGATTACCCAATTAACTAGTTTCTTTTTATCTGCTGCTTAAGAGTATTCAATCATCTGTGCTTCGCATGACAACGGACTCTGGAATTGGAAGTGACTTGAATTCGACTCCTGCTATTGTGTTTGCAGCGATTGGAGGACATGGGCGTCCAAAACATTCCTGTTGATGCAGGTATTAAGGATTTCGATGTTGTCGAGCAAGGGGATGTTGTCGTATTGCCTGCATTTGGAGCGGCCGTGGAGGAGATGTACACGCTGAATGAGAAGAAGGTGCAGATAGTCGATACAACGTGCCCTTGGGTTTCAAAGGTGGGTTTCCCTTTTGAAGATCACCTGATCCTTTCTATGTCGCTCTGAGATTATCAGAAATCAAAGGTATATCTGGTTGATGAACTCCACTACTATATATAGGTGTGGAACATGGTTGAAAAGCACAAGAAGGGTGACTACACTTCTATTATTCATGGAAAATACTCCCATGAAGAAACTGTTGCCACTGCTTCCTTTGCAGGGACATACATCATTGTTAAGAACATAGCAGAGGTATGTTTGATGCATTTAATTTTTTCCTATTGCATTGACTTTCATGTTGAATACATTATTTGGCTCAAATAACAAAATATTATCAATTGTAACAGGCTAGCTATGTATGTGATTATATACTTGGTGGCCAACTTGATGGTTCTAGCTCCACAAAAGAGGAGTTCCTTGAGGTAAAGCCTTTCTTGAATCATCTTTTTTTTTTTTGCCCTGTTATGTTGGAAAGAAATGCCAATGTCTAATCGAATGTTTTATCAACAACTGCAGAAATTCAAAAATGCTGTTTCTCCAGGATTTGATCCTGATGTTGACTTAGTGAAAGTTGGCATTGCCAATCAAACAACAATGCTTAAAGGAGAAACTGAAGAAATTGGTTCGTATGCTAGCAGATGCTAATTGCCATTAGCTTCATGCCTGTTAGTTTGTGTTATTATATACAGTACAATTTGGTTTTAAATATCAAATTTGACTATAATGCTGTATAACTAACAGGGAAGCTTGTTGAGAAGACAATGATGCGTAGGTTTGGAGTTGAGAATGTCAATGACCACTTCATTGCCTTCAACACTATCTGTGATGCCACACAGGTAAACTTTGTTGTACTATTAAGTCATTTATGGCTCCATTGTAATCTGCATAAGTAACCTTGTTCGAGCATATTCCTACAAACTTTGTGGTGTTTTTGGATACAATCAGATCATAGTCTATGTTTGGTTCATATATTGGTGACACCCTTCCCCTTCATATATCAGGAAAGACAAGATGCAATGTACCAGCTAGTGAAGGAGAAAGTTGATCTTATTCTGGTTATTGGAGGATGGAACTCCAGTAACACCTCTCATTTGCAAGAAATTGGAGAACTCAGTGGAATTCCGTCTTACTGGATTGACAGTGAACAAAGGATTGGACCTGGAAACAAGATCAGCTACAAGTTAAATGTATGTTGTAATACTCATATCTCATCAAGAATATTCTTTTTTCTTCAAAAAAAAAATGTTAGTGAATATTATGAAAGAATAGTGTAGATTTTTTTTTGGCAACCAATAAGCAGAATTCTGACAAAATAAGCAGAAACATCAATTGAAAGTATAGTCTTATCACTGAAATCTGAATCATTTTAACAGCATGGCGAGCTTGTCGAGAAAGAGAACTGGTTACCAGAAGGCCCTATCACAATCGGAGTTACTTCTGGCGCCTCAACTCCGGACAAGGTAATACGGCTAACCTGGATTATGTTTTTCTTTTGTACGCAGCCTGCTTGTCTTCTGCACATATTTCTGCACAGTGGTCACTGGATAAAACTAAAAACGCATAACTTTCCTTCTTATGCAGGTTGTTGAGGATGCGTTACAGAAGGTGTTTGAGATCAAGCGCCAGGAAGTTTTGCAGGCCGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009868