BGIOSGA009877

From RiceWiki
Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009877| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009877, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009877

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009877, complete gene.

LocusTag

OSJNBB0011H13.3

Ensembl Transcript ID

BGIOSGA009877-TA

Ensembl Protein ID

BGIOSGA009877-PA

Length

2098

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33971995..33974092

Sequence Coding Region

33973508..33974092,33973199..33973396,33972833..33973057,33971995..33972747

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33971995..33974092 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33971995..33974092 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGTCCTCCCTCGTCACCTCTCTCTTGTTCAGCAGTAGCAGCAGCAGTAACACTGCAACTAGTACAAGCTCAAGAAGAAGCTTCAGTCTCTTCTCCAAGAACCAGTACTGCAAGCCTAGTCCTCTCAGGCGAAGCAGTAGCCTCCTCCTCGTCAGGTGCTCCTTGCAACAGCAGCAGGAGGAGAAGGCGGCGCCGGCGGCGGAGTCGCACCACGCCGGCGGCGGACAGGACGACGCCGCCACGGCGTCGCACCACGCCGTGGAAGGAGAGAACGGTGTCGCAGACGCCGACGGCGGCGGCGTGAAGAAGAGCAAGGAGGAGTTGGAGGAGGAGGAGCAGCAGGAGGTGGACTGGAGGTCGGACGAGGAGTTCAAGAGGTTCATGGGGAACCCGTCCATCGAGGGCGCCATCAAGCTGGAGAAGAAGCGCGCCGACCGGAAGCTCCGCGAGCTCGACCGCGAGCCCGACGCCAACCCGCTCGCCGGCCTCCTCCGCGGCCTCGCTAGGGGCCAGCTCGCCCGCGAGAAGGAGAGGCTCGAGCTCGCCGAGAACACCTTCAAGGCGCTTGACCTCAACAAGCTCAAGAGCTGCTTCGGCTACGACACGTTCTTCGCCGTGGACGTCCGGAGGTTCGGCGACGGCGGCATCTTCATCGGCAACCTGAGGAAGCCCGTGGAGGAGGTGAGGCCGAAGCTGGAGAAGAAGATCGCCGAGGCGGCCGGCACAGACGTCACCCTCTGGTTCATGGAGGAGAAGAACGACGACATCACAAAACAGGTCTGCATGGTCCAGCCGAAGGCAGAGATCGACCTGCAGCTGGAGATCACCAAGCTGAGCACGCCGTGGGGATACCTGAGCGCCGTGGCGCTGGCCGTCACGACGTTCGGGACGATCGCCATCATGAGCGGCTTCTTCCTCAAGCCCGGCGCGACGTTCGACGACTACGTCTCCGACGTGCTCCCTCTCTTCGCCGGCTTCCTCTCCATCCTCGGCGTATCCGAGATCGCGACGAGGCTGACGGCGGCGAGGTACGGCGTGAAGCTGAGCCCGTCTTTCCTGGTGCCGTCCAACTGGACGGGGTGCCTCGGCGTGATGAACAACTACGAGTCGCTGCTGCCGAACAAGAAGGCCCTGTTCGACATCCCGGTGGCGCGCGCGGCGAGCGCGTACCTCACCTCGGTGGCGCTCGCCGTCTCCGCGTTCGTCTCCGACGGCAGCCTGAACGGCGGCAAGAACGCGCTGTTCGTCCGGCCGGAGTTCTTCTACAACAACCCGCTGCTGTCGTTCGTGCAGGCGGTGATCGGGCCGTACGCCGACGAGCTCGGGAACGTGCTGCCGAACGCGGTGGAGGGCGTCGGCGTGCCGGTGGACCCGCTGGCGTTCGCGGGGCTGCTCGGGATCGTGGTGACGTCGCTGAACCTGCTGCCGTGCGGGAGGCTGGAGGGCGGGCGGATCGCGCAGGCGCTGTTCGGGCGCGGCGCGGCGGCGGTGCTGTCGTTCGCGACGTCGGTGGCGCTCGGCGCGGGCGCCATCATCGGCGGGAGCGTGCTGTGCCTGGCGTGGGGGCTGTTCGCGACGTTCGTCCGCGGCGGCGAGGAGATCCCGGCGCAGGACGAGATCACGCCGCTGGGGAGCGAGCGCTACGCGTGGGGGCTCGTGCTCGCCGTCGTCTGCCTCCTCACGCTCTTCCCCAACGGCGGCGGCACCTACTCCAGCGACTTCCTCGGCGCGCCATTCTTCCGCGGCGGCATCTAA</cdnaseq>

Protein Sequence

<aaseq>MSSSSLVTSLLFSSSSSSNTATSTSSRRSFSLFSKNQYCKPSPLRRSSSLLLVRCSLQQQQEEKAAPAAESHHAGGGQDDAATASHHAVEGENGVADADGGGVKKSKEELEEEEQQEVDWRSDEEFKRFMGNPSIEGAIKLEKKRADRKLRELDREPDANPLAGLLRGLARGQLAREKERLELAENTFKALDLNKLKSCFGYDTFFAVDVRRFGDGGIFIGNLRKPVEEVRPKLEKKIAEAAGTDVTLWFMEEKNDDITKQVCMVQPKAEIDLQLEITKLSTPWGYLSAVALAVTTFGTIAIMSGFFLKPGATFDDYVSDVLPLFAGFLSILGVSEIATRLTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARAASAYLTSVALAVSAFVSDGSLNGGKNALFVRPEFFYNNPLLSFVQAVIGPYADELGNVLPNAVEGVGVPVDPLAFAGLLGIVVTSLNLLPCGRLEGGRIAQALFGRGAAAVLSFATSVALGAGAIIGGSVLCLAWGLFATFVRGGEEIPAQDEITPLGSERYAWGLVLAVVCLLTLFPNGGGTYSSDFLGAPFFRGGI</aaseq>

Gene Sequence

<dnaseqindica>1..585#697..894#1036..1260#1346..2098#ATGTCGTCGTCCTCCCTCGTCACCTCTCTCTTGTTCAGCAGTAGCAGCAGCAGTAACACTGCAACTAGTACAAGCTCAAGAAGAAGCTTCAGTCTCTTCTCCAAGAACCAGTACTGCAAGCCTAGTCCTCTCAGGCGAAGCAGTAGCCTCCTCCTCGTCAGGTGCTCCTTGCAACAGCAGCAGGAGGAGAAGGCGGCGCCGGCGGCGGAGTCGCACCACGCCGGCGGCGGACAGGACGACGCCGCCACGGCGTCGCACCACGCCGTGGAAGGAGAGAACGGTGTCGCAGACGCCGACGGCGGCGGCGTGAAGAAGAGCAAGGAGGAGTTGGAGGAGGAGGAGCAGCAGGAGGTGGACTGGAGGTCGGACGAGGAGTTCAAGAGGTTCATGGGGAACCCGTCCATCGAGGGCGCCATCAAGCTGGAGAAGAAGCGCGCCGACCGGAAGCTCCGCGAGCTCGACCGCGAGCCCGACGCCAACCCGCTCGCCGGCCTCCTCCGCGGCCTCGCTAGGGGCCAGCTCGCCCGCGAGAAGGAGAGGCTCGAGCTCGCCGAGAACACCTTCAAGGCGCTTGACCTCAACAAGGTATATCAATGGCGTCTTGATGTACGTCTTCGGTCTTCCCAATTGGGCTAAGATGAGTAGATGAGGGAAAAAAATATATGATTTGATCGTTTGGTCGATTGGTGTGTGCAGCTCAAGAGCTGCTTCGGCTACGACACGTTCTTCGCCGTGGACGTCCGGAGGTTCGGCGACGGCGGCATCTTCATCGGCAACCTGAGGAAGCCCGTGGAGGAGGTGAGGCCGAAGCTGGAGAAGAAGATCGCCGAGGCGGCCGGCACAGACGTCACCCTCTGGTTCATGGAGGAGAAGAACGACGACATCACAAAACAGGTACCAACTTATAATCTTGTGGCATAATGTTATCGATTGCATTTGATCACTCGTGATTGATGTTGTTGTGGCTTTGATTTATGGATCGTCGAAACTTGAAAGCAATTTATCTTGGCGTGTTCTTGTGATTGGATTGATCAGGTCTGCATGGTCCAGCCGAAGGCAGAGATCGACCTGCAGCTGGAGATCACCAAGCTGAGCACGCCGTGGGGATACCTGAGCGCCGTGGCGCTGGCCGTCACGACGTTCGGGACGATCGCCATCATGAGCGGCTTCTTCCTCAAGCCCGGCGCGACGTTCGACGACTACGTCTCCGACGTGCTCCCTCTCTTCGCCGGCTTCCTCTCCATCCTCGGCGTATCCGAGGTAAAGATCTGCCGCTGAGCTCTGCTCACTTATGCTGCTGATCTCGGCGTGTTCTTGGACCAATCCGGCCGATGATCCATGGCAGATCGCGACGAGGCTGACGGCGGCGAGGTACGGCGTGAAGCTGAGCCCGTCTTTCCTGGTGCCGTCCAACTGGACGGGGTGCCTCGGCGTGATGAACAACTACGAGTCGCTGCTGCCGAACAAGAAGGCCCTGTTCGACATCCCGGTGGCGCGCGCGGCGAGCGCGTACCTCACCTCGGTGGCGCTCGCCGTCTCCGCGTTCGTCTCCGACGGCAGCCTGAACGGCGGCAAGAACGCGCTGTTCGTCCGGCCGGAGTTCTTCTACAACAACCCGCTGCTGTCGTTCGTGCAGGCGGTGATCGGGCCGTACGCCGACGAGCTCGGGAACGTGCTGCCGAACGCGGTGGAGGGCGTCGGCGTGCCGGTGGACCCGCTGGCGTTCGCGGGGCTGCTCGGGATCGTGGTGACGTCGCTGAACCTGCTGCCGTGCGGGAGGCTGGAGGGCGGGCGGATCGCGCAGGCGCTGTTCGGGCGCGGCGCGGCGGCGGTGCTGTCGTTCGCGACGTCGGTGGCGCTCGGCGCGGGCGCCATCATCGGCGGGAGCGTGCTGTGCCTGGCGTGGGGGCTGTTCGCGACGTTCGTCCGCGGCGGCGAGGAGATCCCGGCGCAGGACGAGATCACGCCGCTGGGGAGCGAGCGCTACGCGTGGGGGCTCGTGCTCGCCGTCGTCTGCCTCCTCACGCTCTTCCCCAACGGCGGCGGCACCTACTCCAGCGACTTCCTCGGCGCGCCATTCTTCCGCGGCGGCATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009877