BGIOSGA009882

From RiceWiki
Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009882| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009882, complete gene.| tag = OsI_133...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009882

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009882, complete gene.

LocusTag

OsI_13371

Ensembl Transcript ID

BGIOSGA009882-TA

Ensembl Protein ID

BGIOSGA009882-PA

Length

4824

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33904006..33908829

Sequence Coding Region

33908636..33908829,33907480..33907547,33907226..33907296,33906783..33907043,33906191..33906351
,33906018..33906073,33905815..33905867,33905616..33905685,33904861..33904958
,33904006..33904077

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33904006..33908829 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33904006..33908829 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAGGGGGAGGGAGAGGGCGGGGAGAAGAAGAGTCAGCGTCGGCGGCTGAGGGCGGCGTGCCTGCCGCGCCCCGGGTGCTTCACGGTGTCCGCCGCCGACGAGGGGCCGTCGGGCTCCGGCGGCGGAGGAGGGGGGAGTAGGCCGGCGCCGACGCATCTGGTCGTGACGGTCAATGGGATCGTCGGCAGTGCAGAAAATTGGCGTTACGCAGCAAAACATTTCATCAAAAAACATCCTGAGGATGTGGTTGTTCACTGCAGTGGATGCAACGGGGCAGTTCGAACTTTCGATGGAGTTGATGTGATGGGAACAAGATTAGCAGAGGAGGTGCTCTCACTTGTTCAGCGTAGACCAGAGCTTCAAAAGATCTCCTTTGTTGCCCATTCATTGGGTGGATTAATTGCAAGATATGCTATTGCATTGCTATATAAGAGTGCTACAGAAATAGATTCTCATGAAGAGCATGAGAAGCAAATCACTGATGTTTCCAGCAACCAACTTATTGATCGAGGCAAAATTGCTGGTTTGGAGCCTATTAATTTCATAACTTTTGCAACACCACACCTTGGAACAAGATCACATAAGCAGATACCCCTTCTCCGTGGTTCCTATAAACTGGAAAAGATGGCATATCGCATATCATGGATTGCTGGGAGAAGCGGAAAACATCTTTTCCTAAAGGACATTGAAGATGGGAAACCACCACTCCTTCTCCAAATGGTTACTGATTACGGTGATCTCCATTTCATGTCGGCTCTGCGTTCTTTCAAACGTCGTGTTGCTTACTCAAACATCTGTAACGATTTCATTGTTGGCTGGAGAACATCATCAATACGCCATCAACATGAACTTCCCAAGCCGAAGGTTCAGGATACTGATTTTTCAGATTCAATGATATATCAGGCGAAAAATACAAGTGAAATGGAAGAACTGATGCTCAAAGGTCTGAACAGAATTCCATGGGAAAGGGTAGATGTTAGCTTCAAGAAAAGTAGACAAAGGATTTTTGCTCATAGCACCATTCAGGTCAAGACCTATTTCTTCAACTCTGATGGGGCTGATGTGATTTTTCACATGATCGACCATTTTCTTTATTAA</cdnaseq>

Protein Sequence

<aaseq>MAEGEGEGGEKKSQRRRLRAACLPRPGCFTVSAADEGPSGSGGGGGGSRPAPTHLVVTVNGIVGSAENWRYAAKHFIKKHPEDVVVHCSGCNGAVRTFDGVDVMGTRLAEEVLSLVQRRPELQKISFVAHSLGGLIARYAIALLYKSATEIDSHEEHEKQITDVSSNQLIDRGKIAGLEPINFITFATPHLGTRSHKQIPLLRGSYKLEKMAYRISWIAGRSGKHLFLKDIEDGKPPLLLQMVTDYGDLHFMSALRSFKRRVAYSNICNDFIVGWRTSSIRHQHELPKPKVQDTDFSDSMIYQAKNTSEMEELMLKGLNRIPWERVDVSFKKSRQRIFAHSTIQVKTYFFNSDGADVIFHMIDHFLY</aaseq>

Gene Sequence

<dnaseqindica>1..194#1283..1350#1534..1604#1787..2047#2479..2639#2757..2812#2963..3015#3145..3214#3872..3969#4753..4824#ATGGCAGAGGGGGAGGGAGAGGGCGGGGAGAAGAAGAGTCAGCGTCGGCGGCTGAGGGCGGCGTGCCTGCCGCGCCCCGGGTGCTTCACGGTGTCCGCCGCCGACGAGGGGCCGTCGGGCTCCGGCGGCGGAGGAGGGGGGAGTAGGCCGGCGCCGACGCATCTGGTCGTGACGGTCAATGGGATCGTCGGCAGGTGATCCGTCTTCCTCGACCCTCTTTCGCTTTGTGTCTTTTCTTTTGCGTTTCGTTTCACCAACCGTAGCTTCAAACTATATTCGCTCAATGATTAATCTCGTTAATTTCAATGCTAATATAGTTTTAGGATTGTATTTAATATTTGAATGTATCGATTCCGTTAGCTTTGTTACTGTACCATTTGCTATAATAAAGGAATTAGGGAGGATGCACTGTCAGACAAAATTTATACTCTTGGGACTGAAAGTGTCAATCAGGCTGGGTGGTTTCAGATGGGTATCCACACTTTGGTGTAGTGGATGTGGTAGATCCCAAGACAACACCTTGGGAATTGTCGAGTTGAGGAATTAGCAGCATTCTCTGATTAATTTTGGATTTGAAAAATCATCTGCGGCTAGTGGTGCTTTCACATTTCAAAACTTGCTCTGAATCTTTTCGATGCTTCACCTGTAACAAATGTGAAGTCGTGACTTGTGAGTTGTGAGCACTTGCATCGTCAATGGCATCAAGAAAATGGAAACACTTTTCTCCACTAAAGGTTCTTATAACAGTCACTAACTCACTATAGTGCTCGTGCCACCTACTAGTGCTCGTGACATGTATTTTGGGACGGAGGTAGTAGTATTCAGTAAGACGAACATTAGATATATAATAACTACATGATAATGTGATTCATGCGGCTGCAGTCTTGGCACATGCTCCTTGAGAGTACAACATGAATCCATGTGCAATGCTGGCAACCAGCTGTGTACACATGTAAACCCCCAAAATGACTTTTTAGGTTATAACCTTCTTAGCTATCATCCAAATTTCAGTGTTTAGTAGTATTTATTTTAGTAAATGCGCCACACCTTTATGTTCTTGTTTACCCACAAACACAAAAGGTGCTTCTAAGTATTCAAGGAATGCAGAATGGTACAGATTAATCCATTCTACCTTAGATTCTTTGCAAGTTAACAATCTGGCTGCAATTTTCATTAATAAAACGTCTAGCTCCAAGATATAGTTCCTAGAATACTTTTGTGAGGACAAATTCACATCCATTTCCAAATTTCACAAAGGTTTTCCCTTTCAATAACTGTGCAGTGCAGAAAATTGGCGTTACGCAGCAAAACATTTCATCAAAAAACATCCTGAGGATGTGGTTGTTCACTGTAAGTTCAATTCGCCAGGCACTGTAAGTTCAGTTCATATTTTCTACTGTTTTTGGGCTGCTAATTTGGATAAGTAAACTGAGAAGTAGGTAGTTTACATGATTGGTTGGTGTTCAACAATCCCCTCTTAGATAAAAGGATCCATAATCATTATGGTGTGACCTTTTTTTGTTGCCCTATTAGGCAGTGGATGCAACGGGGCAGTTCGAACTTTCGATGGAGTTGATGTGATGGGAACAAGATTAGCAGAGGAGGTAGGTATTGAACTATTCATGAGTTATGCTTCAAAGCTATGCTAGATTGAACACTCTATGACTGATAATTTTACTGCCTTTTAAAATAAGTAACACTTTTTAATGACATGATTATTAACCCTTAAAGTTTTCTTCATCACGCTCCCTTTAATTGACCTCTGCCTTTACTTGTTTGTATTAAGGTGCTCTCACTTGTTCAGCGTAGACCAGAGCTTCAAAAGATCTCCTTTGTTGCCCATTCATTGGGTGGATTAATTGCAAGATATGCTATTGCATTGCTATATAAGAGTGCTACAGAAATAGATTCTCATGAAGAGCATGAGAAGCAAATCACTGATGTTTCCAGCAACCAACTTATTGATCGAGGCAAAATTGCTGGTTTGGAGCCTATTAATTTCATAACTTTTGCAACACCACACCTTGGAACAAGATCACATAAGCAGGTTACGTTCAAAATCTTGAACCTGTATCTTTGTTGCACGTATTGGGATCTTTCCATCTTGTACCATATAAATAGTCACGCATGACAATAAGGACCATATATGAAGTGAGTTTCCAATAAATGCCATCAGTTTTATGGAAAATCAGTTTATGGTCATTTTGTATGTTTATGTTATGATTAAGATGTTTTTCTCAGTTTTGCTCCTGAGTTTGCTCGGTACTGCAGTATTATTTATGCTTATTTTTCTTTGTTCAATATGTGCTGCTATCTTGTTCATAGTAATACTCACCAAGTTACCATCTATCATTACCATTTAGTAGATTAATGATTGTAGTGGACTATTGACTGCAACTGGTCTGGCGTGGTTGTGTGGCAATGAATGATGGGATTCTTAGACAATGCCTTTACTAAGTTATTTATTTTCACATGCAGATACCCCTTCTCCGTGGTTCCTATAAACTGGAAAAGATGGCATATCGCATATCATGGATTGCTGGGAGAAGCGGAAAACATCTTTTCCTAAAGGACATTGAAGATGGGAAACCACCACTCCTTCTCCAAATGGTTACTGATTACGGTGATCTCCATTTCATGTATGCCATTTAAATGTTTTTGTGTAAAAACAACTGTACAAATCGTTCTCCTTGTGTTTCACTAGAAGAAATTTATGCTGATTATTTTGCATACCTTATAAGCTGTTCTATGTGCAGGTCGGCTCTGCGTTCTTTCAAACGTCGTGTTGCTTACTCAAACATCTGTAACGATTGTATCCTTCTCTCATAAATACATATAATTAGTAGATTCGTTGACCTATTGCTTTTTTATCTCTCATAAATACATATAATTAGTAGATTCGTTGACCTATTGCTTTTTTATGGATTAATTGAGAGACTGTCAACCTTGACAACAAGTTCAGTCATTGTTGGCTGGAGAACATCATCAATACGCCATCAACATGAACTTCCCAAGGTAGTAATATATTTTCTATAAGTTCATACTGGGCTTTTAACAGAGTTCTTACGTTTGAATATTCCCCTGCATCAGCCCCAAAATTTTATAAATCATGTTAAATATCCACATGTTGTATATGTGGAAAAGCCGAAGGTTCAGGATACTGATTTTTCAGATTCAATGATATATCAGGCGAAAAATACAAGTGAAATGGAAGGTGTGTAAACTTTTCTCTGTTTGTCTGTAATCAAGTTATTGAATTCATAACTCTTTATGTTCTTATCCATGAATTTTAGAAGGAGGGATCATTTCTTGAAGTGGTTTATTTGATGCCATATGCCCATATCCACACATTTTTGGTCTTACATGAACAATAATTACTAAACAGGAAGATCTGAAATGGAGCGATGGTAGCTTCAAACGTTTCATAATAGTATACTTGTCTTCCAGAAATCAGCAGAAACCATAATTTCATGTTTTAACAACTACTCCACCGAATAGAATCAGCGCTGTATGACTTTGTTCCTTACGCTTTTTATAATTTTTATTTTACAAAAAGCTGAGGTCAAGTTGCTGAATAAGAGAGAGCCCCAAGATGTGGCTTCAACCATTTCTTTATGGAACTTTATGCAACTGGAATTTATAAGAACTGTAGTATTATAGGAGTATCTTTAAGAGAATAATTGACAAATCTAGTGCATAGTATTCATATATCCAGGTTCAATAAGCTTAAATATATCCAGGATTGTTTGTTTTGTTGCGTTGGACTGAAACAATTGTTATTTGTGTGTGCTACATCAATCTGAATTATTCCGTCCTTCATGTGGGTTATGTTGGTTATCATAACTGAATTATCTCATGTATTCAACCGCAGAACTGATGCTCAAAGGTCTGAACAGAATTCCATGGGAAAGGGTAGATGTTAGCTTCAAGAAAAGTAGACAAAGGATTTTTGCTCATAGCACCATTCAGGTATGTTGTAAATCCCTTTGTCTTCTGTTCCTTATTTCTTACTCTGTTCCTTTCTGTTGGAGAAAACTTTCTACACTTGGATTTCTGTGCTCATTAGGCAAAAACAAATAATCCCCTTTTGAATGGCTACCATCTCAATTTTTATTAGTACCTGTTTACTGAAAACTCTCTGAGTTGGCTTCGTTTAAGCTTTATTACTTGTTTTACAAATATACACCATCAAGAGCTTTGTTTATGGTCTAGGGGAAAAATGGGCATTCTGTTATGCTTAAATAGTTAAATGTAAGTCTGGCCAACTGCTTTGCTTGCCGATTTCCCAAATGCTACAGACGGCTCAGATGATGCATCAGCAGACTACTATTTAAATTGGTAGGTTGTCACGGACCAACACAGATGAAATCCTGGTTGTCCATAATAGCAGCAGGCCTCCATTTGATGCCTATTCAAGATAGTTTGGCGCCTATCCGTTTAACCTAAGAAATTCTGAAGCTAAGGTTTTGTTCAACTTGCACAAGCTGGATAGCCTTTATTCATAGTACTTGTTTCTGGGGGCAGAAAGGCATACGAGTTAGTAGCTACTTCCACAGTGCCTACCTTTGGTCATGTATATTCTGTGGGCGGCAATAACTTAAAAATTCAGTTATATTTGTCGAAAATTCAAAGCTGCAATGCAAAAATTTGCAAGAGGCATCATTCAAGATTATTCTATATCACTGGGTTAAAGCAAAGATACAAAGTTGTCACCGTCTGAAAATTGTGCAATTCTTCTCTTTTGTGTTGCAGGTCAAGACCTATTTCTTCAACTCTGATGGGGCTGATGTGATTTTTCACATGATCGACCATTTTCTTTATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009882