BGIOSGA009884

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Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009884| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009884, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009884

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009884, complete gene.

LocusTag

OSJNBA0013A09.9

Ensembl Transcript ID

BGIOSGA009884-TA

Ensembl Protein ID

BGIOSGA009884-PA

Length

4732

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33877994..33882725

Sequence Coding Region

33882537..33882725,33882286..33882445,33881996..33882196,33881813..33881874,33881636..33881690
,33881408..33881475,33881069..33881155,33880657..33880707,33880150..33880389
,33878591..33878684,33878365..33878505,33877994..33878073

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33877994..33882725 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33877994..33882725 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCCGCGGGCTTGTACGGGCGCCTCAACAGGAGCAGCACGCGGGGGTTCCTCGCATACGTGGCGGCGGGGGCGGCGTGCGCCGCGGTGCTCGCCTGCTTCGTCATTCCCGCCGCCGAGCCGCGCGCCGGTGACGCCAATGGCGGCCTCCGCCTCTCCTCGCGGTCGGCGCGCGTCTGGCCGGACCTCGCGTTCAACTGGCGGGTGGTGGTGGCCACCGTCGTCGGGTTCCTCGGCTCGGCGTTCGGCACCGTCGGCGGCGTCGGCGGCGGCGGGATATTCGTGCCCATGCTCAACCTCCTCGTCGGCTTCGACACCAAGTCCGCCGCCGCGCTCTCCAAGTGCATGATCATGGGGGCGTCGGCGTCGTCGGTTTGGTACAACCTGCAGGTGTCGCATCCGACCAAGGAGGCGCCGGTCATCGACTACAAGCTCGCGCTGCTCTTCCAGCCCATGCTCATGCTCGGGATCACAATCGGAGTCGAGCTCAGCGTCATCTTCCCCTACTGGCTCATCACCGTCCTCATCATAATCCTCTTCATAGGGACTTCCTCGCGGTCATTTTACAAGGGAATTCTCATGTGGAAGGATGAGACGAGGATCCAGATGGAGACGCGGGAGCGAGAAGAGGAATCGAAGTCGTCCTGTGCCGCAAGGGATGTGGTTATTGACCCGAGTTGTGAAGAGCCCCTCCTATGCCAGCCTCAGCCCAAGGAGAAATCTGCTCTGGAGACTTTCTTGTTCAATTTGAGGTGGAAGAATATCCTAGTTCTCATGACTGTATGGTCGTCTTTCTTGGTGCTGCAAATCTTCAAGAATAACTCACAATCATGCAGCACTTTCTACTGGGTGATCAACATTCTTCAGGTCCCGGTTGCGTTAAGTGTATTCCTGTGGGAGGGCGTACAGCTGTGCAGAGAGAGCCGTGCTCGACGCATGGATGGGAACTGGGAGTGTGTCTGTGAGGCCTCTATTGAGTGGTCACCTGCACAGCTCATCTTCTGTGCCTTCTGTGGTTTGCTTGGTGGTACTGTTGGTGGCCTTCTTGGATCCGGGGGTGGGTTCATCCTTGGTCCACTTCTCCTTGAGCTTGGGTGCATCCCTCAGGTTGCAAGTGCAACAGCAACATTCGTGATGATGTTCTCCTCATCCCTATCCGTAGTGGAGTTCTACTTCCTGAACAGATTCCCAATCCCTTTTGCTGTCTACTTGATCTGCATTTCCATATTGGCTGGATTCTGGGGCCAGTCCTTGGTCCGGAAACTCGTGCACGTGCTCAAGCGAGCATCTCTGATTGTCTTCATCCTATCCTCTGTCATCTTCGCGAGTGCTCTTACAATGGGTGTTGTTGGAACCCAGAAGAGCATCAGCATGATCAACAACCATGAGTACATGGGGTTCCTCGACTTCTGCGAGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAGLYGRLNRSSTRGFLAYVAAGAACAAVLACFVIPAAEPRAGDANGGLRLSSRSARVWPDLAFNWRVVVATVVGFLGSAFGTVGGVGGGGIFVPMLNLLVGFDTKSAAALSKCMIMGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVLIIILFIGTSSRSFYKGILMWKDETRIQMETREREEESKSSCAARDVVIDPSCEEPLLCQPQPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNNSQSCSTFYWVINILQVPVALSVFLWEGVQLCRESRARRMDGNWECVCEASIEWSPAQLIFCAFCGLLGGTVGGLLGSGGGFILGPLLLELGCIPQVASATATFVMMFSSSLSVVEFYFLNRFPIPFAVYLICISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMGVVGTQKSISMINNHEYMGFLDFCEK</aaseq>

Gene Sequence

<dnaseqindica>1..189#281..440#530..730#852..913#1036..1090#1251..1318#1571..1657#2019..2069#2337..2576#4042..4135#4221..4361#4653..4732#ATGGCGGCGGCCGCGGGCTTGTACGGGCGCCTCAACAGGAGCAGCACGCGGGGGTTCCTCGCATACGTGGCGGCGGGGGCGGCGTGCGCCGCGGTGCTCGCCTGCTTCGTCATTCCCGCCGCCGAGCCGCGCGCCGGTGACGCCAATGGCGGCCTCCGCCTCTCCTCGCGGTCGGCGCGCGTCTGGCCGGTAAGCCGCTAGCGAGCGAGCTCGCTTCTCTCGTGCGTGCGTGCGCGTGATGGTTGCGCTTTCGGCGTGCTGACCTCCTGTGGGGTTGCAGGACCTCGCGTTCAACTGGCGGGTGGTGGTGGCCACCGTCGTCGGGTTCCTCGGCTCGGCGTTCGGCACCGTCGGCGGCGTCGGCGGCGGCGGGATATTCGTGCCCATGCTCAACCTCCTCGTCGGCTTCGACACCAAGTCCGCCGCCGCGCTCTCCAAGTGTAAGCCCGCCGCTCTGCCTGCCTCGCCTTCCACCGGTGACATGGCTCGTTTTTTTTTTTTCTGAAAGTTGGTTTTGAATTCGGCGCAGGCATGATCATGGGGGCGTCGGCGTCGTCGGTTTGGTACAACCTGCAGGTGTCGCATCCGACCAAGGAGGCGCCGGTCATCGACTACAAGCTCGCGCTGCTCTTCCAGCCCATGCTCATGCTCGGGATCACAATCGGAGTCGAGCTCAGCGTCATCTTCCCCTACTGGCTCATCACCGTCCTCATCATAATCCTCTTCATAGGTTTGTACAGCTAACAAATGTGTTGTTAAGCACGATCTGGCGCTTTTGTGGCGCTGTCCTTTGCGTGCCCTGTGAGATAGCTGAGATTGATGTGTGTTTGGGTGCGCTTGATCGATTGCAGGGACTTCCTCGCGGTCATTTTACAAGGGAATTCTCATGTGGAAGGATGAGACGAGGATCCAGGTTAGTTTTGGTCGCCATCTGTCTTGTTTGGTTTGTTGGTTGGGTTCGCTTTCTAATTACTGTGTCCTGATAATCTCTTCTTTTTTTTCTTTTTTTTCTTGGGGGGAATTATTCCATTGCAGATGGAGACGCGGGAGCGAGAAGAGGAATCGAAGTCGTCCTGTGCCGCAAGGGATGGTACGAAACAGCCCCAAGCCGCTTGTACAGCGTCAGAAAGTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACATATTTTAAACATGTTATGATCCAATTTCTGCAGTGGTTATTGACCCGAGTTGTGAAGAGCCCCTCCTATGCCAGCCTCAGCCCAAGGAGAAATCTGCTCTGGTAAGCCACAAATATCTTGCCAAGCTGCCAGTACGATTCATGATCTACTAAGCAATAGCACTGCCTACGATCTTGATCATATAGTATGCTTTGATTGGCTTAGGGGCACTAATTAAGCTTGTTCAATGATTGCTATGATTGGTTTAGGGTGTCGTTGGTAGATACTATGAACATGCAAGAAAGCAATATAAAACAAAGTACAGTTTGTCCTATGCCCTGTGCTCACTGATTCGATGTTATTTTTAATTCCAGGAGACTTTCTTGTTCAATTTGAGGTGGAAGAATATCCTAGTTCTCATGACTGTATGGTCGTCTTTCTTGGTGCTGCAAATCTTCAAGGTATCCTTTTTTACATTCAACTCAAGAATAGTTTTGCACTTTCAATCTAGTCTATTTCAAAATGTCCTTCCACATAACACTGATAGACACACAATGTTTATCCAGTAAGCACAAGCAATGCACATTGAGTAAATAACAAATGATTGTTCATGGTCTCATGGTTCAATAATTCTTGCGCACATGTGCAAGTGTGAGTCTGTTTGTCAGTGGTTATTATTGCCTTGTGGCTCAGTGTGCTGACGTGGTCCCTCCATCACTGCTCTTATAGTGTCGATTCAGCCTTTACACATAGAGCTTTTGCTGGCTTTCTTTTTTTGGTCTGGAATTTGTCACTAACTGCTAAATGTTTTCCCCCCTGCAGAATAACTCACAATCATGCAGCACTTTCTACTGGGTGATCAACATTCTTCAGGTAAGACATCATTCTGCCTTGTAACACTTGATCCGCTTGACTGTTTTTCACTACCACAATTAAATTCTCCTGGGTCCCAAGTTGTCACAGTAACCTTGAGCTCGTGCGGTGTTTCTATTCTATGAAATATTATCGCCATGGATCTACTAAGCTTAGTTTGTCCATCCACCATTTTTTGAGCAGCTCAAAACTTCACTCTGCCTAGACTTTTCATTCACTTGCACACTGAAAGATGATAATATCTAACCAGTTTATTTATCAACTCAGGTCCCGGTTGCGTTAAGTGTATTCCTGTGGGAGGGCGTACAGCTGTGCAGAGAGAGCCGTGCTCGACGCATGGATGGGAACTGGGAGTGTGTCTGTGAGGCCTCTATTGAGTGGTCACCTGCACAGCTCATCTTCTGTGCCTTCTGTGGTTTGCTTGGTGGTACTGTTGGTGGCCTTCTTGGATCCGGGGGTGGGTTCATCCTTGGTCCACTTCTCCTTGAGCTTGGGTGCATCCCTCAGGTATTTTATATTATTTTCATTTCTTGCGGTTCAGTTTCAAACGTTATTCAGATCATCATACTTAAGAAAATTAATTTTCATTTGATTGTGTTTAAGCTAGTGTCTTGTTTCTGACATGCAACTCATGAGAGAACGTGGCTTAGCCTTCCCAAGAGGGATAACAAGTAAAATGAGCATGAGTGGGGTACCATGCTGATAAGGATGCCAAATAAGCATTGGGGGGGGGGGGGGGGGTTTCATGGCTCCACGTGCTGCATCCTAATCCTAGTATAGATCATTGTAACGCATTTGCATCTAGGCAAGACCAGTGAAGAGATAAGAACGGGTCTTGTCATTGTCTATGTAGCTTCTATAAGTGTGCACACGTCCTTACAAAAGGTGAAAAAAAAATCCCAATACAACTTGGACTCGGTATTCTTTCAGCACTTCAAATGCATATACTGAATGAAACCTGTTAGCATCAGAACCATATGCTTGCAATATATAATTCAAAATGGCAATTATGAGCAACTTCTATTCCCGCAATTTGCTCATACTATTGAAAGCTTATGGAATGCCAAATAAATAGTTCAGCATCCAGTATGTGCAAGTAATGCCAAATATTTTGGCCGTCTGGACAAAACTGTATGTTGTGATATATGTTACTTCGTACATATATATTCATTTTTAATTCTTTAGGTAGCCTTGATAAATGCACATAGACACTTTTGGATTGAAGTGGCCTGTTAGAACTTTGTTACTAACTTTATCTAGTATATATCTGTTTGCATGAGGGTGTACATGAGGAGGGAGTCCAACTAGCTATTTATGTATCATTATATGATTGTCAGAAACCTTTAGTTAACTGCATATAGACAGGTTCATTTGCAATAGTATATTCTATGACGTTGATTTCAGGCTAGATAAGCATTAGGTACACTGTACTGGTTTAAGATTTCTGTACGGATTTATACATTTATGAGTTCTAAAACTGACTAATTTTCAAATAATAAGGCATTCCATGAATATTTCTGTGTCTAATGACTCCCATAACATTAGTAAAGGATATTTATGATGGAGGCATGTCTGCTTTATCTTTCCCCTACAAAACAGGCATCCGATGCAAAAAAGGAAAAAAATAATAATCCAAATTGCATGGTTGATAAAATATTGTTTGAAAGTGTCCTGATATTTGAAACTATTTAAATTGTGCATTGGCTGGCCTGGTCCTCAATCATCTACACTGTGCCCCTATTATTGGCAGGACCTAAGCTTTCGATTATCATTCAGAAAAGAAACATAGCAGTATTTGATATGAATCCCATGTAACTAGTTAAATCTAAGGAAACGGTGCCTTGTTCTTCATATGCAGAAGAATGTTGTGATTTATAATCATTTATGTTATGTGATTTTCGGCGTTCTTTGCCCCTTTTTTCCTGTTTTGTCATTTATTTCACTGTTTGTGGGATTGTCATTTATTTGTCAGGTTGCAAGTGCAACAGCAACATTCGTGATGATGTTCTCCTCATCCCTATCCGTAGTGGAGTTCTACTTCCTGAACAGATTCCCAATCCCTTTTGGTAATTCCTGGATGCTAATATCTGTTTAGAAATAGCATTTCCAAAGTAACCGTTCAATAATGATGTGAACTGTTTGTTCCTGCAGCTGTCTACTTGATCTGCATTTCCATATTGGCTGGATTCTGGGGCCAGTCCTTGGTCCGGAAACTCGTGCACGTGCTCAAGCGAGCATCTCTGATTGTCTTCATCCTATCCTCTGTCATCTTCGCGAGTGCTCTTACAATGGGTAATGGCCAGAACACATTGACTGAATGTCCTTTTTAGATAACAAACCACTAAGTGCTATGCAGTCTAATTGAAATTCAGCCAACAAAATCATTTACCATGGATCCTACGTTTTCCTTAGAAACATCTAAACAGAATACACTTTAGTATTGACAGGTTCAAACCAGTTTGGCCTGCAAAAGCCGTTCCTTGATTAACCTTTATAGGCCCATCGCTTTGCCTTTATCTATATGTATGTCTGTACTGCCTGTTCTTCTCAGCTTTCCTAACATTTGTTTCCTCGTAAATTCAGGTGTTGTTGGAACCCAGAAGAGCATCAGCATGATCAACAACCATGAGTACATGGGGTTCCTCGACTTCTGCGAGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009884