BGIOSGA009887

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Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009887| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009887, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009887

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009887, complete gene.

LocusTag

OSJNBA0013A09.12

Ensembl Transcript ID

BGIOSGA009887-TA

Ensembl Protein ID

BGIOSGA009887-PA

Length

4810

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33803177..33807986

Sequence Coding Region

33807703..33807986,33807309..33807455,33806008..33806071,33805647..33805856,33805217..33805408
,33804745..33805043,33804377..33804653,33803967..33804242,33803584..33803817
,33803177..33803425

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33803177..33807986 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33803177..33807986 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATTTTCTGCCCTTCTGACTTCGGCAGGCATAAACATCGGCCTCTGTGCGCTCTTGCTGTCACTCTATTCAGTCCTTAGGAAGCAGCCTCACAACTATGGCGTCTACTTCGGGAGGCGGCTCGCCGAGGAGAAGTTCCGGCAGCAGGTCGACTACTTCTCGCTTGAGAGGCTCTTGCCTACCGCTGGATGGATAGTGAAAGCGTACTGGTGCACGGAAGAGGAGATACGACGGGTTGCTGGCTTGGATTCCGTGGTGTTCCTCCGCCTCTTCATCTTCAGCATACGTATCTTCTCGATAACTTCTCTTGTTTGCATATTTGGAGTGCTTCCTGTTAATTACCATGGGAAAGAAACGAATCACGGACGTATTCCAGCAGAGTCTCTCAATGTATTCACAATTGCAAATCTCAAAGAAGGATCACGAATGCTTTGGGTGCATTGTGTTGCCTTATATGTTATAACAATATCAGCTTGTATTCTTCTATACTATGAGTATAAGTATATATCAAGGAAGAGATTGGCGCATATTACTGGATCACCACCTGATCCGGGTCATTTTTCTGTGCTTGTTCGATCAATACCAAAGTCAGATAATGAGCTACTTGATGACACTATCAGAAATTTCTTTGTTAATTATCATGGATCCAGTTACTTGTCACATCAGATGATCTACCGGAAAGGAAGTATGCAGAAATTTGTGGATAATGCAGAGAGGGTATATAGGAAATTTGTAAGAGTTAAGATGTCTTCATTTGGACAGAGTAGAAGGTCTGACTTGTCCAGATGTGGTCTTTGTGGAGTACGGGCTTCGTCGTTTCAGCAATATCGCAATAAATTCATCAATTCCAAGAAGCCAGACCTAAGTGATCCAGAAGTAATTGAAGCTCAGAAGGATTGTCCAGGTGCTATAGTATTCTTCAAGACTCGCTATGCGGCAATTGTTGCTTCACGAATTCTTCAATCTTCAAATCCTATGCTATGGGTGACAGATTTTGCTCCTGAGCCAAGGGATGTCTATTGGTCAAACCTCTGGATCCCCTATAGACAGATCTGGCTCCGGAAAATAGCAACACTTGCAGCTAGTGTTGCCTTCATGTTTGTTTTTATTGTCCCCGTTGCATTCGTCCAAAGCATGATGCAACTGGATCAGATTGAGCAGCTATTTCCAAGCCTGAAAAACATGTTGAAGAAGCCCTTTTTTGTCAAACTTGTAACGGGATACCTCCCTAGCGTCGTTCTGCTGCTGTCCCTGTACACAGTTCCTCCAATGATGATGTTCTTCTCTTCCATAGAAGGATCGATTTCTCGCAGTGGCAGGAAAAAAAGTGCTTGCTGCAAAATTTTGTTCTTTACCATCTGGAACGTCTTCTTTGTCAATGTCCTGTCAGGATCCGTGCTAAATCAGCTAAATGTCTTCACTAGACCAAGGGATATGCCATCTATGCTTGCCGAACTTGTACCAAAGCAGGCAACTTTCTTCATCACTTATGTCCTCACATCAGGATGGGCAAGTCTATGCTCCGAGATATTGCAAGTGTACAACTTAGTATATAACTTCTTCAGAAAATGTATATTTTGCTACCGGGATGATCCAGAATATGGCTACTCTTTCCCTTACCATACTGAAGTCCCGAAAGTCCTCCTGTTCAACCTGCTTGGCTTCACATTTTCGATAATGGCACCTCTCATACTGCCCTTCTTGCTAGTCTACTTTTGCCTCGGCTACCTAGTGTATCGCAATCAGATCCTAAATGTCTACTACCCAAAGTACGAAATGGGAGGGAAACTGTGGCCAATCATGCACAGCACCTTGGTTTTCGCCCTGGTTTTGACACAGACCATAGCTCTTGGAGTGTTCACCATAAAGCACGCTACTATATCTTCAGGGTTCACCATCCTACTAATCATCGGGACAGTCCTCTTCCATCAGTATTGCAGACACCGGTTTTCAAGCATATTCAACTCCTTTTCTGCCCAGGATCTGATAGAGATGGACAGAGACGATGAACAATCCGGGAGGATGGAGGAGATCCACAAGCACCTTCTGGACGCCTACTCCCAAGGCACCACCAACATGGACAACTCCAGTTCTTCCAGGAATGGAGGGGCTCCAATCGAAATGATCATGGAAGATCCTGCGCAGGATGCACAGGATTCTAACCAAGAACTCTGTGACGCCGTGAAGGAAGTGACTGGGTCGATTCAGGAACATGCCGACGAGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MEFSALLTSAGINIGLCALLLSLYSVLRKQPHNYGVYFGRRLAEEKFRQQVDYFSLERLLPTAGWIVKAYWCTEEEIRRVAGLDSVVFLRLFIFSIRIFSITSLVCIFGVLPVNYHGKETNHGRIPAESLNVFTIANLKEGSRMLWVHCVALYVITISACILLYYEYKYISRKRLAHITGSPPDPGHFSVLVRSIPKSDNELLDDTIRNFFVNYHGSSYLSHQMIYRKGSMQKFVDNAERVYRKFVRVKMSSFGQSRRSDLSRCGLCGVRASSFQQYRNKFINSKKPDLSDPEVIEAQKDCPGAIVFFKTRYAAIVASRILQSSNPMLWVTDFAPEPRDVYWSNLWIPYRQIWLRKIATLAASVAFMFVFIVPVAFVQSMMQLDQIEQLFPSLKNMLKKPFFVKLVTGYLPSVVLLLSLYTVPPMMMFFSSIEGSISRSGRKKSACCKILFFTIWNVFFVNVLSGSVLNQLNVFTRPRDMPSMLAELVPKQATFFITYVLTSGWASLCSEILQVYNLVYNFFRKCIFCYRDDPEYGYSFPYHTEVPKVLLFNLLGFTFSIMAPLILPFLLVYFCLGYLVYRNQILNVYYPKYEMGGKLWPIMHSTLVFALVLTQTIALGVFTIKHATISSGFTILLIIGTVLFHQYCRHRFSSIFNSFSAQDLIEMDRDDEQSGRMEEIHKHLLDAYSQGTTNMDNSSSSRNGGAPIEMIMEDPAQDAQDSNQELCDAVKEVTGSIQEHADEM</aaseq>

Gene Sequence

<dnaseqindica>1..284#532..678#1916..1979#2131..2340#2579..2770#2944..3242#3334..3610#3745..4020#4170..4403#4562..4810#ATGGAATTTTCTGCCCTTCTGACTTCGGCAGGCATAAACATCGGCCTCTGTGCGCTCTTGCTGTCACTCTATTCAGTCCTTAGGAAGCAGCCTCACAACTATGGCGTCTACTTCGGGAGGCGGCTCGCCGAGGAGAAGTTCCGGCAGCAGGTCGACTACTTCTCGCTTGAGAGGCTCTTGCCTACCGCTGGATGGATAGTGAAAGCGTACTGGTGCACGGAAGAGGAGATACGACGGGTTGCTGGCTTGGATTCCGTGGTGTTCCTCCGCCTCTTCATCTTCAGGTTTTTCTCCATTCTGATTTATGCTCCATTTTCCACGGCAGGAATTAGTATATTTAATCATGATTTACATCGTTTGATAGGATCATCTTTTTTATTGTGGACATATCTTGATACATAGTTCTAATAAAATGACAAAACCATATACCTTTTTGTGTCGGAGTGATTTTACGGTCCTTCAGGAGGTACTGAGAAGTATAACTGTTTTTAGGTCGACAATTTAACAGTTGGTACATTGTTTCTTCTGCAGCATACGTATCTTCTCGATAACTTCTCTTGTTTGCATATTTGGAGTGCTTCCTGTTAATTACCATGGGAAAGAAACGAATCACGGACGTATTCCAGCAGAGTCTCTCAATGTATTCACAATTGCAAATCTCAAAGAAGGATCACGAATGTAAGATCTCGGTTCACCTGAATCTTGAAACAATTTCCTAATATATCATGTTCACCTGAAGTTGGATACACGCAAAAGAATAATATTAGCTGAAAATTTTGGACGATTGCATGCTACAAAGTAAGAAAAAAGAATAAGGCTTCAATTTTGTAGGCAACAAATGAGCCCCTTATTTCTCAATAATATATTTTTATAGTTCTTAAACCATGAAAATATACTCTATAAGTATTTTACAAGTTCATCTTTTAACTGTAGAAAGAATAGGAGCCACCATGTTTTGCAGTATCAGGAGTTCCTATTTATTTATTATTTAGTATCACTAGTACAGATTAAGCTCGTCCAACATTAACATCCTCAGGGATGACGGAAAGCATTTGAACCACTGCTGGTAGCATCAATAGTATTGGACAAACGACGAACAATACTTCCCCTCTTATCTTTGTTTAAATTCTTTTGGCAACATCAAAATTTTAAATCAACTTATCTATTTTTTTTTTAAAATCATCAGCAACATTTGTTACGGGTGTTGGGCCAGGAGGCTTAGGGCCATGACCAGGTCAAGTAGCCTCAATGGTAGGGAGTGAGATCCTATAATGTGAAGTCAGAGGAATGCGGGGATTGACATGTGGGCCCCACTGCTTGTGGGCCCACCTGTCAGTGACCATGTTAGAGGGAAGTTCATGTCAGAGGATCCTCTTCCCATAGGCACCCTTTTCAGGTTGTAGGCGCTCTCTTTAGGTTGCGTGAACAGTACCTACAAAGTATTTTACAGTCGTTAGAGTTTGTTGCTTAAAATATAAGATGGTATCCGGCTAGTCTTTTAGAATTAAGCAATGATGAAGAAGAATTAGTGTAATTTCCCTCAAATTCTCTTCCCCAACCTATAATCTCATCTCACCTCAATCAAGTTGACGCCACCAGGCTATCTTCCCGGCTGTGTTTAGCCCTAATGAATCCTTGCCAATAACACATTTTATTTCTTAGTGGGTCTTAATTTATTTTTCCATGACGTACATCATTTGATCTGTTGGAGTTTTTACATTTTATTTCACGACTAAAAACTCGCATCTTTCTCGAATTAGATAAATTACTAACATCCACTTATGACAAAAGGCCTTCTCCTTATTTCATTTGGTAAATCAATGTTGTTGATTGCTCAAGTGTTTTAAGATATGAACATTTCCTATTCTAGTTAGTTTATTATTATTACTGAAAGTCTTTTTTTTTCTTTGCACAGGCTTTGGGTGCATTGTGTTGCCTTATATGTTATAACAATATCAGCTTGTATTCTTCTATACTATGTAAGACCTTTCCACACATTTCTTTTTTACCAAATGGTTTTATCTCCAATTTCCTCATATTCCAAGTAGCCATTTGTGGCAGCTTGTTGTATATTGTATAATGTCTTCTTTTTTTATAAGATATAGTTTATTGTATATTATCATGCTGCAGGAGTATAAGTATATATCAAGGAAGAGATTGGCGCATATTACTGGATCACCACCTGATCCGGGTCATTTTTCTGTGCTTGTTCGATCAATACCAAAGTCAGATAATGAGCTACTTGATGACACTATCAGAAATTTCTTTGTTAATTATCATGGATCCAGTTACTTGTCACATCAGATGATCTACCGGAAAGGAAGTATGCAGAAATTTGTGGTAAGAATTCGTTTCAGCAGTAGAGATTTTGTTGTCCTCAAATATTGCTGGAATTCAAACTATATTTTCTAACAATTGATTTAGCTACTACAATCTGATATTCTTACGGAAGCAAGCAGACTAACTATTCATAGTTGAAGTTCAAATTCTGGCTTCTGTTTCTGTTTCAGAAACACATGAAATAAGTCCATATGGTACCTCGAATCACCTCCTCAGGCATATAAGTTTGTTTCTTCAGGATAATGCAGAGAGGGTATATAGGAAATTTGTAAGAGTTAAGATGTCTTCATTTGGACAGAGTAGAAGGTCTGACTTGTCCAGATGTGGTCTTTGTGGAGTACGGGCTTCGTCGTTTCAGCAATATCGCAATAAATTCATCAATTCCAAGAAGCCAGACCTAAGTGATCCAGAAGTAATTGAAGCTCAGAAGGTCTTCTCCCTCCTGATATCATTGCCATTTGGGTTAAACTACTGCTTTTAACTAGTACATTACATGATATCCCTCCTCACCATAGTCACTCAGTAATATGCATGTGTAAGGTTGCATTGTAACTCAGGTTTAGGTGCATCAGCATATATAATTCTTGTCGTATTACTGAACAGGATTGTCCAGGTGCTATAGTATTCTTCAAGACTCGCTATGCGGCAATTGTTGCTTCACGAATTCTTCAATCTTCAAATCCTATGCTATGGGTGACAGATTTTGCTCCTGAGCCAAGGGATGTCTATTGGTCAAACCTCTGGATCCCCTATAGACAGATCTGGCTCCGGAAAATAGCAACACTTGCAGCTAGTGTTGCCTTCATGTTTGTTTTTATTGTCCCCGTTGCATTCGTCCAAAGCATGATGCAACTGGATCAGATTGAGCAGCTATTTCCAAGCCTGAAAAACATGTTGAAGAAGTAAGTTCAGACTTTCTGAGATCACCACTAGATTATCTGTTCGGATTTAATGTTTTGACAATGACAGCTTCTGTTTGATCATCTTGTTTAGGCCCTTTTTTGTCAAACTTGTAACGGGATACCTCCCTAGCGTCGTTCTGCTGCTGTCCCTGTACACAGTTCCTCCAATGATGATGTTCTTCTCTTCCATAGAAGGATCGATTTCTCGCAGTGGCAGGAAAAAAAGTGCTTGCTGCAAAATTTTGTTCTTTACCATCTGGAACGTCTTCTTTGTCAATGTCCTGTCAGGATCCGTGCTAAATCAGCTAAATGTCTTCACTAGACCAAGGGATATGCCATCTATGCTTGCCGAACTTGTACCAAAGCAGGTGATGATATTTCTTTACCGCCGAAATGCCATCATTTTCATTTTTATCTCACAGCTAGAAATAAATCACCATAGCACATTCCATTCCCCTTTTTCATATGTTGCTTTTAAATGGATTATTCTCCACTTTTACAGGCAACTTTCTTCATCACTTATGTCCTCACATCAGGATGGGCAAGTCTATGCTCCGAGATATTGCAAGTGTACAACTTAGTATATAACTTCTTCAGAAAATGTATATTTTGCTACCGGGATGATCCAGAATATGGCTACTCTTTCCCTTACCATACTGAAGTCCCGAAAGTCCTCCTGTTCAACCTGCTTGGCTTCACATTTTCGATAATGGCACCTCTCATACTGCCCTTCTTGCTAGTCTACTTTTGCCTCGGCTACCTAGTGTATCGCAATCAGGTGAACACACTTCCTTCTTGACTCAACCTGTGAACTTGTTTACTTGATTTATCAAGTTATCAATCAAAGATTATTAAGATCAAATCAATATATTAACATCAGTTGTTTTTGAATACGTCCATCTGTTAAGCATCGGAACATTTTTGCAGATCCTAAATGTCTACTACCCAAAGTACGAAATGGGAGGGAAACTGTGGCCAATCATGCACAGCACCTTGGTTTTCGCCCTGGTTTTGACACAGACCATAGCTCTTGGAGTGTTCACCATAAAGCACGCTACTATATCTTCAGGGTTCACCATCCTACTAATCATCGGGACAGTCCTCTTCCATCAGTATTGCAGACACCGGTTTTCAAGCATATTCAACTCCTTTTCTGCCCAGGTTAGTATGAAAAACATTTTCAGGCAGATCCTCTCCTTTGAAATGGAGGCATCTTATGGGGATTTTATAGAAGTTGAACCAATTCCTGTGAAAATCCTGTAAAATTCCAGCGTTCCAACGGAGCACCGAAGTTTGAACTTAAGCTTTGGTTTCTGCAGGATCTGATAGAGATGGACAGAGACGATGAACAATCCGGGAGGATGGAGGAGATCCACAAGCACCTTCTGGACGCCTACTCCCAAGGCACCACCAACATGGACAACTCCAGTTCTTCCAGGAATGGAGGGGCTCCAATCGAAATGATCATGGAAGATCCTGCGCAGGATGCACAGGATTCTAACCAAGAACTCTGTGACGCCGTGAAGGAAGTGACTGGGTCGATTCAGGAACATGCCGACGAGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009887