BGIOSGA009897

From RiceWiki
Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009897| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009897, complete gene.| tag = OsI_133...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009897

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009897, complete gene.

LocusTag

OsI_13337

Ensembl Transcript ID

BGIOSGA009897-TA

Ensembl Protein ID

BGIOSGA009897-PA

Length

4548

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33583312..33587859

Sequence Coding Region

33587566..33587859,33586915..33587023,33586752..33586816,33585792..33586116,33585516..33585684
,33584837..33584946,33584688..33584743,33584530..33584586,33583651..33583794
,33583312..33583398

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33583312..33587859 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33583312..33587859 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAAGGCGCTCGTGGAGCGGCTGGAGGCGGCGGTGGCGCGCCTCGAGGCCGCCGTGGCCTCCGGGGCCTCGCTGTCGGCGGCGCCGCGGGACCTCGGGGACGGGCTGGACGCGGCGGCGGCGGCGTCGGATCCGGCGATCGTGGCCTACGACGAGTTCGTCGCCGGGGCCGTCGGCCGCCTCACCGCCGCGGCCGAGAAGATCGGAGGGAAGGTGCTCGACGCCACCAAGGTCCTCGCCGAGGCCTTCGCCGTCTCCAAGGACCGCCTCGTCCAGGCCAAGCAGCTCCAGCAATTGCGATGCACTGAAGGAAGGAGGCCTGACTATTTCAACCATATCAAGAGTGTTGCCGACAGTCTCACTGCTTTGGCGTGGGTTGGCTTCCTAGGAAAGGATTGTGGCATGAGTTTCCCTACAGCACATGTTGAAGAAAGTTGGCAGATGGCTGAGTTCTACAATAACAAGGTTCTTGTGGAGTACAGGAACAAAGATGCTGACCATGTTGAGTGGGCTAAAGCTTTGAAGGAGCTATACATGCCTGGTTTACGGGATTTTGTTAAGAAACATTACCCTCTTGGTCCTTCCTGGGGTCCAGTTGGAGGTGCACCTGTATCCCAACCAAAGGCTACTGCTCCAGCTCCTAAAGCACCAGGGGCTAAGGCTCCCCCTCCACCTGCTCTACCTTCGGCACCCCTTTTTACCACAGAGAAATCTCCTAAATCTGCACAGCCTAAAGAAGGAATGTCAGCTGTCTTTCAGGAGATTAGTTCAGGCAAAGCTGTGACCACAGGATTGCGAAAGGTTACTGATGACATGAAGACTAAAAACCGGTCTGATAGAAGTGGTGTTGTTAGCAGCAGCACTGCTGCTCCGGCTGCTGCTCCTGAGAAGACCTCTCGTGCAGGGTCTTTCTCCTTCAAGTCTGGGCCTCCAAAATTGGAGCTTCAGATGGGGCGCAAATGGGTGGTCGAAAATCAAGTTGGTAAAAAGAACCTTGCAATCGATGATTGTGATGCTAGACAATCTGTATATGTGTATGGATGCAAGGATTCTGTCCTTCAAGTAAATGGTAAAGTGAACAATATCACTGTTGACAAATGCACCAAAGTTGGAATCGTTTTCAAGCATGTTGTAGCAGCTTTTGAAGTTGTCAATTGCAATGGTGTTGAGGTGCAATGCCAGGGTACAGCACCAACAATATCAATCGACAACACATCTGGATGTCAATTGTACTTAAGCAATGATTCACTTGGAGCCTCCATCACTTCAGCTAAATCTAGTGAAATCAATGTGATGGTTCCAAGTGGTGCTACTGATGGTGATTGGGTGGAACATGCTTTGCCCCAACAGTACATCCACAGCTTCAAAGACGGGCAATTCATCACCTCACCGGTGTCTCATTCCGGAGCATAG</cdnaseq>

Protein Sequence

<aaseq>MEKALVERLEAAVARLEAAVASGASLSAAPRDLGDGLDAAAAASDPAIVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQQLRCTEGRRPDYFNHIKSVADSLTALAWVGFLGKDCGMSFPTAHVEESWQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSWGPVGGAPVSQPKATAPAPKAPGAKAPPPPALPSAPLFTTEKSPKSAQPKEGMSAVFQEISSGKAVTTGLRKVTDDMKTKNRSDRSGVVSSSTAAPAAAPEKTSRAGSFSFKSGPPKLELQMGRKWVVENQVGKKNLAIDDCDARQSVYVYGCKDSVLQVNGKVNNITVDKCTKVGIVFKHVVAAFEVVNCNGVEVQCQGTAPTISIDNTSGCQLYLSNDSLGASITSAKSSEINVMVPSGATDGDWVEHALPQQYIHSFKDGQFITSPVSHSGA</aaseq>

Gene Sequence

<dnaseqindica>1..294#837..945#1044..1108#1744..2068#2176..2344#2914..3023#3117..3172#3274..3330#4066..4209#4462..4548#ATGGAGAAGGCGCTCGTGGAGCGGCTGGAGGCGGCGGTGGCGCGCCTCGAGGCCGCCGTGGCCTCCGGGGCCTCGCTGTCGGCGGCGCCGCGGGACCTCGGGGACGGGCTGGACGCGGCGGCGGCGGCGTCGGATCCGGCGATCGTGGCCTACGACGAGTTCGTCGCCGGGGCCGTCGGCCGCCTCACCGCCGCGGCCGAGAAGATCGGAGGGAAGGTGCTCGACGCCACCAAGGTCCTCGCCGAGGCCTTCGCCGTCTCCAAGGACCGCCTCGTCCAGGCCAAGCAGCTCCAGGTACGGGGCGCGGCTTCTCTCATGTGTTCCTGCCTTGATCTCTTAGATTTTGGGTGTGCTCGGCGCGTAGATCTCCCGGCGTTCCGTACTGTTTGGGCCAATCTGATGTGCGTCCCGGGGAGGAATCTCGCGGGAATGACTGATCAACCCGAGATTTGGAGGCGAATTCAGGATTTTGGTATTTTGTTTATCGAGATGGCCAGGGCCATTCTGCTGGAGGTTCATTGTGCGATGACGTGCTTACATGTTTATTGATAACATTTATGTACAAAATTATTGATAACATTTATGTACAAAATTACTTCAGCCATTGTGAGATCTGAAAAATGCGATGTCCATTCTTATTGCTAGCCTGAACTTTGATTGGTTCTAAGTTGGGAACATTACACATAGTCATTCAGTTACTAAGGGCGAGGGGGGGTGAAGAGGTGCCCATTCTTGCATCAGTAATCAGCTTTTTTTTCCTAATGTTGCGCAGAAACCTGCATCAATGGCTGATGCACAAGACTTCTTTAAGCCGCTGAATGATGTTATTGCGAAAGCAATTGCGATGCACTGAAGGAAGGAGGCCTGACTATTTCAACCATATCAAGAGTGTTGCCGACAGTCTCACTGCTTTGGCGTGGGTTGGCTTCCTAGGAAAGGATTGTGGTTAGTAAATTTGTTATGTTTGGATTTTAGCATTGGTGTCTTGCCGACTACCATATATATCATTCTGTAATATTTCTCCCATTCTTCTTCTCTGCAAGGCATGAGTTTCCCTACAGCACATGTTGAAGAAAGTTGGCAGATGGCTGAGTTCTACAATAACAAGGTACACTTTTTTTATTCGACCATTTTCTATATTTGCTTTACTAACAATTTGCCACTTTTAGATTTAGCATTTAACAATTTGCCACCCATAGACATGTGGGTCCAGCTGGCAAATTGTTAAACGCCACATGTAAGAGTGGCAAATAGTTAAATATCTCCATATTTTATACCTACAGTATGTAAAGTCACAAAATGCGTCAATTGTGAAGCCTGGTCAGAATGCTCAAAGTTTTCTCCTTTTAGAAAGGGATGCTAGACAATCATTCTCGCGATGAGAATGGCTTTCGTATGGTGAGAAGTAGGGCTGTTTTGTCACCTTTCATTATTCCTTCAGTCTGTGTATCTCTCAAGTTTCTGGGAAATAATGCATTTTGTTATATGCATATCATAAAGTGTTTCACATAATAAAATGTGCGCGACATCCAACAATTTCTTTCACCATTAGCCTGACAAGTAAGAAACCAACTACTCCTATGAAAAACATAGTAGTAGTTTTTTTTACCTGTTTTTCCAGTATTCCTTATAGCTGAGTACGCGATGATGATATTAATCATTGACCTGAGTTATCTCATTCAATTGCAGAACCATACACATAATTATACTGTTTTGAAGAATGCTCATTAATCTTCCTCTTAGGTTCTTGTGGAGTACAGGAACAAAGATGCTGACCATGTTGAGTGGGCTAAAGCTTTGAAGGAGCTATACATGCCTGGTTTACGGGATTTTGTTAAGAAACATTACCCTCTTGGTCCTTCCTGGGGTCCAGTTGGAGGTGCACCTGTATCCCAACCAAAGGCTACTGCTCCAGCTCCTAAAGCACCAGGGGCTAAGGCTCCCCCTCCACCTGCTCTACCTTCGGCACCCCTTTTTACCACAGAGAAATCTCCTAAATCTGCACAGCCTAAAGAAGGAATGTCAGCTGTCTTTCAGGAGATTAGTTCAGGCAAAGCTGTGACCACAGGTAGATGAAAACACGTGATTCATCTATTTTGTGACATTTTTTTCCCTTTTGTTTTTGTTATCAATACTGAAAAACAGACCTGTGACAGCCCTATTACTGTTTTGCAGGATTGCGAAAGGTTACTGATGACATGAAGACTAAAAACCGGTCTGATAGAAGTGGTGTTGTTAGCAGCAGCACTGCTGCTCCGGCTGCTGCTCCTGAGAAGACCTCTCGTGCAGGGTCTTTCTCCTTCAAGTCTGGGCCTCCAAAATTGGAGCTTCAGATGGGGCGCAAGTGAGCTTCACCCTGATTATTAAACAAAACACCAAATAGATTACTATCTAAGACTCTAGTATATACTGTCAATTGGTACAGTATGGGTTTGATTGATGGCCTGCATGGCTGCATGAACACCAACCAGGTCCAACAATGAGGATTATCTGGGAAGCCTCGTTTCTGGTTAGCTAGGTTGCATTAGTGAGTTGGTACAGAAGTTGCAAGAATGGGGGCTTTGGTAGACAAATAGCTTGAAACCATACATTTCTATATAGTTAAATTATATGTACAAGATAAGTATTGCAAATAGAATTAATTACATACATCTAGTTAATTTCAAATTTGAGTAGTATGTTATATGCCACAAATTCATATAATTCCACATGATTGAAGCTTCCCAAGACACAATAACCATTTATTTTATTATGGTGGCACCGTGGCAGTCTGAAGGACCTTGCATCATTTACTCATTTAGACATATAGTCAGAAGGACGCCATATAATTTTCTTGTTCTGATAAAATGTGCTTATATTATATATTGTTGATTATTCTGTTCATATTTCCCTGAGATATAAAAAAAATGGCAGATGGGTGGTCGAAAATCAAGTTGGTAAAAAGAACCTTGCAATCGATGATTGTGATGCTAGACAATCTGTATATGTGTATGGATGCAAGGATTCTGTCCTTCAAGTAAATGGTAATATACACCTTTATTTGGGATATGTAACGTATTACATATCACGTTCTCCCATATTATTTGGTGTCATAACAATTATAAAACATTTTGCAGGTAAAGTGAACAATATCACTGTTGACAAATGCACCAAAGTTGGAATCGTTTTCAAGGTTAGTGGGTTAGTTTAAACTGTTGAGACCAAATTTAACCCTGAGCTAAATTTTATTCTATTACTGTGGCAAAACTAAATTCTGTTTACCGAATGTTTCAGCATGTTGTAGCAGCTTTTGAAGTTGTCAATTGCAATGGTGTTGAGGTGCAATGCCAGGTATTCAGTTTTGGAATGCTATACTCATAACTGTAAATGTGTGAACAGTGTTAAGGAGTATTCTATCTGGTTACATTACTGCTCTTCCCTCTCTAAAAGGATGTCGCTTTTGTGTGTGTTCTGGATTGCTTGTCATACTTTTAGGATTTGACCTTTATCTAATTTTAGAAATATCAAGCTTGGGCATGCCCAGAATCATCTAGGTTTAAGCAATCTGCCGATCTCCTAATCTCCTTTGCTTGGTCAGTTATTATTATACGATGTCATAAAATCACTATTGGATGGTCAGGTCGAAAGACTGAAATGTTGGACATTCACCCTCATCATGCTGCCAGCAGATGAGGCGCAAAGTCTGGCACAAAAGAATGCGAGGGACTAGATAATTGCTTGTTTTTGAACTTAATGTTTTATCGCCTTTCCTTTTGAATTTAGTACTTATAAATTTCAACAAATTATTCTGTCTAGAAGCTATTTTTATTTGTGTTCTGTTGTCCTGACCCCTGAGTGTGAGTTTTCATTGCCATTCGGTACGTAAGCTTTACCATCACCGTGTTTAGTTGCAAACTTTTTTTTCAAACTTCCAACTTTTCCATCACATCAAAACTTTCCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTCCAATTTCAACCAAACTTCCAATTTTAGCATGAACTAAACACACCCTTGTCTGTGTTGCTGTCAGAGACTGAAGTTCTTTAACTTGCAGGGTACAGCACCAACAATATCAATCGACAACACATCTGGATGTCAATTGTACTTAAGCAATGATTCACTTGGAGCCTCCATCACTTCAGCTAAATCTAGTGAAATCAATGTGATGGTTCCAAGTGGTGCTACTGATGGTGATTGGGTAAGATCTGATCTTCTGTCTATGTGTTTACCATGACCCAATTGGGAATTCTTTAAATCTGTTGTGGGTGATGTTAGTTGTTGCCTTGTTGGTGTGCACATTAACTGGGCAATATAATCAAACACCTTTGATGATGCAGACATCTCTTTTGAGTACAAACAGTACCATTAGGGGCTTACAGTCGATATCCTCTTGCTTCTAGAGACAATCTATATACAGTCTGGCGCTTAAGATATTGTTCTTATATTGCAGGTGGAACATGCTTTGCCCCAACAGTACATCCACAGCTTCAAAGACGGGCAATTCATCACCTCACCGGTGTCTCATTCCGGAGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009897