BGIOSGA009906

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Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009906| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009906, complete gene.| tag = OsI_133...")
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Gene Name

BGIOSGA009906

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009906, complete gene.

LocusTag

OsI_13315

Ensembl Transcript ID

BGIOSGA009906-TA

Ensembl Protein ID

BGIOSGA009906-PA

Length

3987

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33419228..33423214

Sequence Coding Region

33422552..33423214,33421150..33421825,33420116..33420932,33419538..33419834,33419228..33419435

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33419228..33423214 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33419228..33423214 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTCTTCAAGACCTACTCAATGTTCCAGTTCATCCAGCAGGACCCGCCAAAGCTCCCGGGCAAGGATATTAGCACAAACAACTCTTGATGCTGAACTCAATGCTGAATATGAAGAATATGGCGACTCCTTTGATTACTCCAAATTGGTTGAAGCACAGAGAACTACTGGACCTGAGCAGCAAGCTCGTTCTGAGAAGGTCATAGCTTACTTGCATCACATTCAGAGAGCAAAGCTAATCCAACCATTTGGTTGCTTGTTGGCCCTTGATGAGAAGACCTTCAATGTTATAGCGCTCAGCGAGAATGCACCAGAGATGCTTACAACTGTCAGCCATGCAGTGCCAAGTGTTGATGATCCCCCAAAGCTACGCATTGGCACCAATGTATGGTCTCTTTTCACTGACCCAGGTGCCACAGCACTGCAGAAGGCACTGGGATTTGCTGATGTTTCCTTGCTGAACCCTATCCTAGTTCAATGCAAGACCTCAGGCAAGCCTTTCTATGCCATTGTTCATCGGGCAACTGGTTGTTTGGTGGTAGACTTTGAGCCTGTGAAACCTACAGAATTTCCAGCAACTGCCGCTGGGGCTTTGCAATCTTACAAACTTGCTGCCAAGGCAATCTCTAAGATCCAGTCACTGCCAGGTGGAAGCATGGAGAATGCTCCAACTGAGTCTCAGATACGTGATATTGCCTTCTGGCTGTCAGATGTCCACAGGGATTCCACTGGCCTGAGTACTGATAGCCTACATGATGCTGGATATCCAGGAGCTGCTGCTCTTGGTGATATGATTTGTGGAATGGCAGTAGCTAAAATAAATTCCAAGGATATCCTGTTCTGGTTCAGGTCACATACAGCTGCTGAAATCAGATGGGGAGGTGCAAAACATGATCCATCAGACAAGGATGACAGCAGAAGAATGCACCCTAGGCTGTCCTTCAAGGCATTCCTTGAGGTTGTCAAGATGAAGAGCTTGCCTTGGAATGACTATGAGATGGATGCTATTCACTCATTACAACTTATACTTAGAGGGACACTGAATGATGACATCAAGCCAACAAGGGCCGCTAGTTTAGATAATCAGGTTGGTGATCTCAAGCTTGATGGGCTTGCTGAATTGCAGGCAGTTACAAGTGAAATGGTTCGTCTCATGGAAACAGCAACTGTCCCAATCTTGGCTGTAGATAGCAATGGATTGGTCAATGGATGGAATCAGAAGGTTGCTGAGTTGACAGGGTTGAGAGTAGATGAGGCTATTGGAAGACACATACTTACCGTTGTAGAGGAATCTTCTGTACCAGTTGTCCAGAGGATGCTGTATTTAGCTTTGCAAGGCAAAGAAGAGAAGGAAGTGAAATTTGAGGTGAAAACTCATGGCTCCAAGAGAGATGATGGCCCTGTTATCTTGGTTGTGAATGCCTGTGCCAGCCGGGACCTTCACGACCATGTTGTTGGTGTGTGCTTTGTTGCACAAGATATGACTGTTCATAAGTTGGTCATGGACAAATTTACTCGGGTTGAGGGAGACTACAAAGCAATTATTCACAATCCAAGCCCGCTTATTCCTCCCATATTTGGTGCTGACGAATTTGGATGGTGCTCTGAGTGGAATGCTGCCATGACGAAATTGACCGGGTGGCATAGAGATGAGGTGATCAATAAGATGCTTCTTGGTGAGGTGTTTGATAGCACCAACGCCTCCTGTCTTGTGAAGAATAAAGATGCATTTGTAAGTCTCTGCATTCTTATCAACAGTGCATTAGCTGGTGATGAAACAGAAAAGGCTCCATTCAGCTTCTTCGACCGGAACGGGAAGTATATCGAGTGCCTTCTTTCTGTTAACAGAAAAGTAAATGCAGATGGTGTCATCACTGGAGTATTTTGTTTCATTCAAGTTCCTAGTCATGAGCTGCAACATGCACTACATGTGCAGCAAGCCTCACAGCAGAATGCACTAACAAAGTTGAAAGCTTACTCCTACATGAGACATGCAATCAACAACCCTCTCTCAGGTATGCTTTACTCTAGGAAAGCACTGAAGAACACAGGTCTGAATGAAGAGCAGATGAAGGAGGTCAATGTTGCAGATAGTTGTCACCGCCAGCTGAATAAAATACTTTCTGACTTGGATCAAGATAGCGTCATGAACAAGTCTAGTTGCTTGGATTTGGAGATGGTTGAGTTTGTATTGCAAGATGTGTTTGTGGCTGCTGTAAGTCAAGTACTCATAACTTGCCAGGGAAAAGGGATTAGAGTCTCTTGCAACCTACCGGAGAGATATATGAAGCAAACAGTCTACGGGGATGGTGTTCGACTACAGCAGATTCTCTCTGACTTCCTATTCGTCTCAGTGAAGTTCTCTCCTGTTGGGGGTTCTGTTGAGATCTCTTGTAGCCTGACCAAGAACAGCATTGGGGAAAACCTTCATCTCATAGACCTAGAACTTAGGATCAAGCACCAGGGCAAAGGAGTCCCAGCAGATCTGCTGTCACAAATGTACGAGGATGACAATAAGGAGCAGTCGGATGAAGGCATGAGTCTTGCGGTTTCTAGAAACCTGCTGAGGCTCATGAATGGCGATGTCCGACATATGAGGGAAGCTGGCATGTCAACCTTCATCCTCAGCGTCGAACTTGCTTCTGCTCCAGCAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MSSSRPTQCSSSSSRTRQSSRARILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQPFGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMENAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSEMVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIGRHILTVVEESSVPVVQRMLYLALQGKEEKEVKFEVKTHGSKRDDGPVILVVNACASRDLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIIHNPSPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEVINKMLLGEVFDSTNASCLVKNKDAFVSLCILINSALAGDETEKAPFSFFDRNGKYIECLLSVNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTKLKAYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSVMNKSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQILSDFLFVSVKFSPVGGSVEISCSLTKNSIGENLHLIDLELRIKHQGKGVPADLLSQMYEDDNKEQSDEGMSLAVSRNLLRLMNGDVRHMREAGMSTFILSVELASAPAK</aaseq>

Gene Sequence

<dnaseqindica>1..663#1390..2065#2283..3099#3381..3677#3780..3987#ATGTCTTCTTCAAGACCTACTCAATGTTCCAGTTCATCCAGCAGGACCCGCCAAAGCTCCCGGGCAAGGATATTAGCACAAACAACTCTTGATGCTGAACTCAATGCTGAATATGAAGAATATGGCGACTCCTTTGATTACTCCAAATTGGTTGAAGCACAGAGAACTACTGGACCTGAGCAGCAAGCTCGTTCTGAGAAGGTCATAGCTTACTTGCATCACATTCAGAGAGCAAAGCTAATCCAACCATTTGGTTGCTTGTTGGCCCTTGATGAGAAGACCTTCAATGTTATAGCGCTCAGCGAGAATGCACCAGAGATGCTTACAACTGTCAGCCATGCAGTGCCAAGTGTTGATGATCCCCCAAAGCTACGCATTGGCACCAATGTATGGTCTCTTTTCACTGACCCAGGTGCCACAGCACTGCAGAAGGCACTGGGATTTGCTGATGTTTCCTTGCTGAACCCTATCCTAGTTCAATGCAAGACCTCAGGCAAGCCTTTCTATGCCATTGTTCATCGGGCAACTGGTTGTTTGGTGGTAGACTTTGAGCCTGTGAAACCTACAGAATTTCCAGCAACTGCCGCTGGGGCTTTGCAATCTTACAAACTTGCTGCCAAGGCAATCTCTAAGATCCAGTCACTGCCAGGTGGAAGCATGGAGGTGCTATGCAATACGGTGGTCAAGGAACTCTTTGACCTCACAGGATATGATAGAGTTATGGCTTATAAGTTCCATGAAGATGACCATGGTGAAGTCTTTGCTGAGATCACAAAGCCTGGTCTTGAACCTTATCTTGGCCTGCATTATCCAGCTACTGATATCCCTCAGGCAGCCAGGTTTCTTTTCATGAAGAACAAAGTCCGGATGATTTGTGATTGCCGTGCAAGATCTATCAAGATTATCGAAGATGAGTCGCTCCACTTGGATATTAGCTTATGTGGTTCAACACTGAGGGCACCACACAGTTGTCATCTTCAGTATATGGAGAACATGAACTCGATTGCATCCCTTGTCATGGCTGTTGTGGTTAATGAGAATGAGGATGATGATGAAGTTGGGGCTGATCAACCTGCACAACAGCAGAAGAGGAAGAAACTATGGGGACTCCTTGTTTGCCACCATGAGAGCCCCAGATATGTTCCTTTCCCATTGCGGTATGCCTGTGAGTTCTTAGCACAAGTGTTTGCTGTCCATGTTAACAAGGAGTTTGAATTAGAGAGGCAAGTACGCGAGAAAAGCATATTGAGGATGCAAACAATGCTCTCTGACATGCTTCTCAGGGAATCCTCTCCTCTGAGTATAGTATCAGGGACTCCCAACATCATGGACCTTGTGAAATGTGATGGTGCTGCTCTTTTGTATGGGGGAAAAGTGTGGCGGCTACAGAATGCTCCAACTGAGTCTCAGATACGTGATATTGCCTTCTGGCTGTCAGATGTCCACAGGGATTCCACTGGCCTGAGTACTGATAGCCTACATGATGCTGGATATCCAGGAGCTGCTGCTCTTGGTGATATGATTTGTGGAATGGCAGTAGCTAAAATAAATTCCAAGGATATCCTGTTCTGGTTCAGGTCACATACAGCTGCTGAAATCAGATGGGGAGGTGCAAAACATGATCCATCAGACAAGGATGACAGCAGAAGAATGCACCCTAGGCTGTCCTTCAAGGCATTCCTTGAGGTTGTCAAGATGAAGAGCTTGCCTTGGAATGACTATGAGATGGATGCTATTCACTCATTACAACTTATACTTAGAGGGACACTGAATGATGACATCAAGCCAACAAGGGCCGCTAGTTTAGATAATCAGGTTGGTGATCTCAAGCTTGATGGGCTTGCTGAATTGCAGGCAGTTACAAGTGAAATGGTTCGTCTCATGGAAACAGCAACTGTCCCAATCTTGGCTGTAGATAGCAATGGATTGGTCAATGGATGGAATCAGAAGGTTGCTGAGTTGACAGGGTTGAGAGTAGATGAGGCTATTGGAAGACACATACTTACCGTTGTAGAGGAATCTTCTGTACCAGTTGTCCAGAGGATGCTGTATTTAGCTTTGCAAGGTGGGTAAATTAGCTATAGTGGTTTTTGTCTATTCCCCCAGTATTTTTCAAGTTTCTGCTTATTTGGCAATTCGATTTATCAAAAAAACTTTGGGGTTGCTTTCTAATGTTCAATGCCTAGATATGCTACATTTGATTGTCATGCTCATACATTAATACTTGACATTCAGCTGCGTTGTGGGTTGATTGATTTCTAAACATTTCTTTGATTGATCAGGCAAAGAAGAGAAGGAAGTGAAATTTGAGGTGAAAACTCATGGCTCCAAGAGAGATGATGGCCCTGTTATCTTGGTTGTGAATGCCTGTGCCAGCCGGGACCTTCACGACCATGTTGTTGGTGTGTGCTTTGTTGCACAAGATATGACTGTTCATAAGTTGGTCATGGACAAATTTACTCGGGTTGAGGGAGACTACAAAGCAATTATTCACAATCCAAGCCCGCTTATTCCTCCCATATTTGGTGCTGACGAATTTGGATGGTGCTCTGAGTGGAATGCTGCCATGACGAAATTGACCGGGTGGCATAGAGATGAGGTGATCAATAAGATGCTTCTTGGTGAGGTGTTTGATAGCACCAACGCCTCCTGTCTTGTGAAGAATAAAGATGCATTTGTAAGTCTCTGCATTCTTATCAACAGTGCATTAGCTGGTGATGAAACAGAAAAGGCTCCATTCAGCTTCTTCGACCGGAACGGGAAGTATATCGAGTGCCTTCTTTCTGTTAACAGAAAAGTAAATGCAGATGGTGTCATCACTGGAGTATTTTGTTTCATTCAAGTTCCTAGTCATGAGCTGCAACATGCACTACATGTGCAGCAAGCCTCACAGCAGAATGCACTAACAAAGTTGAAAGCTTACTCCTACATGAGACATGCAATCAACAACCCTCTCTCAGGTATGCTTTACTCTAGGAAAGCACTGAAGAACACAGGTCTGAATGAAGAGCAGATGAAGGAGGTCAATGTTGCAGATAGTTGTCACCGCCAGCTGAATAAAATACTTTCTGACTTGGATCAAGATAGCGTCATGAACAAGTACTTTTCTTACCAAGTATTCTAAGTTACTCTCTTAGGCTCTTGTATTTACTTTCAGCTACCTTTGTTCTTCATCAATTGTCAGACCTAACAGGTCGATGGTGTTGCTCTTATAGTCTTATGTGTTTGTATTATCTTCAAGTGGTCAATTTTGCTCTCTCAAAATGAAAGAATTTGTTGCACCAAGTCCCAGTGGTTTTTTACTCATTACTCAGTACAAACCTTATATATATATTATTAGTTATTATCTTCAAACTAATTTCCTGCTGCTGTGTTCACAGGTCTAGTTGCTTGGATTTGGAGATGGTTGAGTTTGTATTGCAAGATGTGTTTGTGGCTGCTGTAAGTCAAGTACTCATAACTTGCCAGGGAAAAGGGATTAGAGTCTCTTGCAACCTACCGGAGAGATATATGAAGCAAACAGTCTACGGGGATGGTGTTCGACTACAGCAGATTCTCTCTGACTTCCTATTCGTCTCAGTGAAGTTCTCTCCTGTTGGGGGTTCTGTTGAGATCTCTTGTAGCCTGACCAAGAACAGCATTGGGGAAAACCTTCATCTCATAGACCTAGAACTTAGGTATGTTAGTCATGACATTTGCACGCTTACTCTTCTTTCTGTTAAGACAGTCTTGAAGTATAAAATGATGTGTATTAACTCTTGTGGATCAATGTTTTTCAGGATCAAGCACCAGGGCAAAGGAGTCCCAGCAGATCTGCTGTCACAAATGTACGAGGATGACAATAAGGAGCAGTCGGATGAAGGCATGAGTCTTGCGGTTTCTAGAAACCTGCTGAGGCTCATGAATGGCGATGTCCGACATATGAGGGAAGCTGGCATGTCAACCTTCATCCTCAGCGTCGAACTTGCTTCTGCTCCAGCAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009906