BGIOSGA009922

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Revision as of 09:08, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009922, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009922, complete gene.

LocusTag

OSJNBA0014G15.2

Ensembl Transcript ID

BGIOSGA009922-TA

Ensembl Protein ID

BGIOSGA009922-PA

Length

3480

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33058678..33062157

Sequence Coding Region

33062152..33062157,33061513..33061575,33060337..33060440,33060175..33060250,33059913..33059996
,33058678..33059262

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33058678..33062157 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33058678..33062157 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTTACTTTCCTCCATCAAAGAACGTGGTTTTGTACCTGTTACTCCATTGGTTATTGCCTTGCTGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MELLSSIKERGFVPVTPLVIALLVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQGADTAVLLSGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSSAESVVRKAEDVVSSMLAKGFVLSKDALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVSELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAEEERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLESVDEQKLQAV</aaseq>

Gene Sequence

<dnaseqindica>1..6#583..645#1718..1821#1908..1983#2162..2245#2896..3480#ATGGAGGTGAGCTCCGGCTCTCGCCTTTTTCTCCCCTGTTCTCTTTTTCTTTTTTTGGTCTCTTCCTTTTGGATATGCTTGCACGGTGGTGTTCGTCGCTGTTGTTTCGAGACGGGGATTTGATGCGCTATTGGTGGTGGTACGCGCGGTTTGGGCTTTTGTTTCTTTGGTCGGTGCTCTCGCCGGAGTTGTTAATCGCCGGCAGCAGGAGAGGGATCGTAGGAGGAGGAGGAGGAGGTGTTTCTGGCGGCGATTCTGGTCGATTTTGGGTCGGGCGGCGGCGGGCGAGTAGAGATGAGCGAATTCCGCCGCGCGTTAATTGATTGATTCCTCCATGGCACGCTACAATGCAAGCTAACGTGAGTATGGTAGATTTCGTGCGCCCTGGATGGTCAGCTCTTTTATAATTTGCTCGTTTGCAAGACTGCCGCATCGGCATTGCTGAGAAATTCTGGATGCGCTGCATATGAGGTGGTCAGTGCGTTGCTGAATTCTGGTGCTTTCGGTGTATTCCGTTGGGGGAAATCTTGTTTCGATGACTATAGGATGAACTTGTTTTTTAATTTTTGGGTCCTTACTTAGTTACTTTCCTCCATCAAAGAACGTGGTTTTGTACCTGTTACTCCATTGGTTATTGCCTTGCTGGTAATTTTGACGGCTCCAGTGGTAAAAAGAGCTGCTAGATCTGAACTTAAGTTTGTTTGCTTGCTTCTAGTTGGCACTGCTTCCTCCATCTTCAAGCTCCAAATCGCTGCATTTCCTAGCAGGTAGAGGTTAATTAAAAAAAAATGTACCTGAGTAGTATGCTCGAACCTTTGTACCATGTTCTTTGTTTTGGGCTCTTCTTTGTCAATTTTAGCATGAAATTAGTTGGAAGGTATTGAATGCTATCCTTGATGTTTGCAATTAATCCGTCCTGGTAACATGACAGCTGCTACTCTTTTATGCATTACCTGGCTGTCCTGTGCAATGATGCAACATCATTGTACATGTTTGAGTCATGAGTTTGCTTCTTTTTTTTTTTTTGAAACAGTAGACGGTAGGAGTTCTATCTATATATTAGAAGAAGAGAGTTGACCCTGTTTATAAGGAAAACATCATGAGTTTGCTTTCAACGTTGTGAATTGACTGTTTACTGCTTCACATTGCTATCCGGTTAAAATGTCCAAACTGGAATGGTTAAGGCTGACCTTACATGTATAGCCTCTTGAGGTCTCATGAGGCACCAGTGCATGGTTATGATCCTAAGCCATGTCAATGGTACTAGAAGAGACAAGCTTTAGCCAAAACTGAAATGGGAGGAAGCAGTTAGAAGAGATTTGAAGGCATGGAATGCATCCAAACTCCAAAGATTTGGCTTTGGAGAGGGGCATGTGAAAATTTATGATCCACATGCGGAACCATGACCTAGAAAATTGTGTTTTCTTTAACTAGTACCATGCACCTATTTTTATCAGTAGTAAAGTCTTTTGTTTCTTGTGGCTCAACTTGGGTTTTATATCTAGCCTACACCAACTTGCTTGGGGCTAAAGTCTTTTGCTGTTAAAGATGAGCTGGGAAACAATTTACTTAATTTAGTTTGCTACAATGAGTTGACTCTATTGTTGAGTGGTACAATCATGCTAGCCCATAATCTCATATTGTACTGCCCTGTGCTGGAGTCCGAATCACACTATTGATCTCATCCCCTCTACTCTTATTTGATTTCCTTTTGCAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGGTGATTCATCATTGTTTGTCACATTGGCCATGTACGTATGAAGGCTGTAAACGTATTTCTTAAATGTTTGCTTCTGCCTTGACCAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGTATGTTCAAGTTCTAACAATTCATTTTTAACTATTTTTGTTCCATTGCATTAGGAGTAAGGTTGCCTACTTGGTTCTACTTTCCTCATGCAATTGCTGCACCTTGCATGTTAATATGTCTCACGCCATTTCTATTTATCTTATATATTATTTCTAATATTTTAGTTACCATCTACAGGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGTAAGAATATGTTACATTTTAATGGCTTGCTCTTTATTTCAACTTTAAAGTTACATCAAACGGAAGCAATCACTACTTTTATTTTGGGAAGGATTATGATTACATCGTATCTCAAACAAAAGAGATTTATTATTATTATTATTAACTGTTTTCTACAGACAAGTTATTCTTGCGGCAAGTATTTTGGGGTTAAGACCTGGCCAAAAAAAACTCCTTGTTGACAAGAGTTGAGCAGTGGAATAAGAGAACATAGTGATTTCTTATAAATGCTAGAAGATACTTGGATTATATTGCTGTTACTACCTACATTTGCATTGGTTGTCTATATATGTTATTTTCCACCAGTCAAACCTGTTCGTTTTGACAATTAGCAGTTAAATTTCTTAGCAATCATGTAACATGGGTTTTTAAACTATGTGCCATGGTAAGATCATTCCAAAATTAGTCAGTTTATTTGAATCAGATCTGGATGTCAAGTGGAAATGCATCCATTATGTGTCAAATCAATTATGATGCCATTTTAGATTTTAAAACCATTTTATCTGCATATTGAACTGTTTCCGATCATGGGACACCAAAGTACTTCCTGCTGTACTTGTTGGTACTCCATTTCTATGCATTTGTCTGAATTTCATCATTTGTATGAACAGGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009922