BGIOSGA009929

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009929| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009929, complete gene.| tag = OsI_132...")
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Gene Name

BGIOSGA009929

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009929, complete gene.

LocusTag

OsI_13258

Ensembl Transcript ID

BGIOSGA009929-TA

Ensembl Protein ID

BGIOSGA009929-PA

Length

2600

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32968521..32971120

Sequence Coding Region

32969446..32971120,32968521..32968585

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32968521..32971120 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32968521..32971120 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGACAAAATAGACCTCCCAGAAAACATTCTTAGAGATTATATCCCAGATGTTGACAAGGTAAAATGGATACCGGACAACAATCACAACATAACTTACTTCACAGAAGATGATATCAAAAGAATAACAAACAATTACAGCACTAAGCTTGGAAAGGGTGCTTATGGAGAGGTTTATAAAGGGGTTATTGGGGATAACCGTTTCGTAGCTGTGAAGAAATTTATTAGAGTAGATAAACTAGATGAGTTTGCTAAAGAGGTAATTGTTCATACTCAAGTCAACCATAAGAATGTAGTAAGGCTGGTTGGGTGTTGTAAAGACAAAAATGCTCCAATGATTGTATTTGAGTATGCTGCTAATGGAAACTTGAGTGATCTTCTTTATTGTGGTGATACTCCAATCTCTTTGGGCACAAGATTGAGCATTGTTATACAATGTGCGGAAGCATTAGGGTGCATGCACTCCATGTACAATCCCATTGTTCATTGTGATTTTAAGCTGTCCAATATTCTTGTGGATGAGAACTTTCATGCAAAAATATCTGATTTTGGAATATCAAGGATTCTGTCAACAGATAACACAAATCTAACTGTGAATGTGCGAGGGAGTATTGGCTACATGGATCCAACATTTGCATGGGAGGGGCGCCTCACACCAAAAAGTGGTGTGTATAGCTTTGGGGTTGTTCTTATTGAACTCATTACAAAAACAAAGCCAACAAACATGGAGAAAAATGTCATTAGAAGATTTATTCAAGCTCCTCAAAAACGGAAGGGTGCAAAGGAGTTGTTTGATGTGGACATTGCAAAGGAGAGCAACATGAAAATTCTTGAGGGTATTGGGAAAATAGCAAAAGATTGCATAAAAGAGGACATTGATAAACGTCCAGAAATGAATGATGTCGCTGCACGTCTCCGAGAGCTCAGGAAAACTCTTGAACTAGGGGGGGAAAAGACAGGTTGGCAATTCTTTTCTGGAGGTCAGAATGATTTGAAAAAAGAGAACCAGCATGAAAGAAGCAATTCCAACTCCAACACGGTTCTCTATAGGAGGAAGAGTCTTGGCATTTTCAACTGGATTGGCGCAACCAATAACTTTAAGAAGAATGGTGGACATATACTAAAAGACATCTACAACATAAGGATTTACACAAATGAGGAAATACTTAATATCACACAGAACTTCTCAACTGCTCTGAGTAAAAGCTCTAGCAGCGATGTTTACTTGGGAGACATTGATGACAATACCAGAGTGGCAGTGAAGGTTTTCACTAACGTGAGTGAATCTCGTGAGGAGTTTGTTTTGCAACTGATCATCCAATCTCAAGTGCAACATCAAAACATTGTCAAGCTCTTTGGTTGTTGCCTGGAGATGGATCATCCGATTTCAGTGTGTGAGTATGTGCCCAATGGTGCCCTTTGCAATTACCTAGTTGTGGAGAAGGGTGAAGAAACAGGGGAAAGGTCACTCTTGGATATGAATACATGTCACTTCATTGCGTTGGGGGTGGCGAACGCGATAGCATGCTTGCACGAGAAGTGGCTGGACACACTGAATGACAGCATCACGCCGTGGGATATTCTTCTGGATGGTAACTTCTGCTCCAAGTTGTCCAAGCCAACACCTATAATTATTAATGAGAGTACCATCATGACTACTGAAGTAGTACCAGGCTCACTAGCAAAAGCAGTTACTGTAGTCAATAGGCTGCCCCTTTTTACCTCCATCTACATGTAG</cdnaseq>

Protein Sequence

<aaseq>MGDKIDLPENILRDYIPDVDKVKWIPDNNHNITYFTEDDIKRITNNYSTKLGKGAYGEVYKGVIGDNRFVAVKKFIRVDKLDEFAKEVIVHTQVNHKNVVRLVGCCKDKNAPMIVFEYAANGNLSDLLYCGDTPISLGTRLSIVIQCAEALGCMHSMYNPIVHCDFKLSNILVDENFHAKISDFGISRILSTDNTNLTVNVRGSIGYMDPTFAWEGRLTPKSGVYSFGVVLIELITKTKPTNMEKNVIRRFIQAPQKRKGAKELFDVDIAKESNMKILEGIGKIAKDCIKEDIDKRPEMNDVAARLRELRKTLELGGEKTGWQFFSGGQNDLKKENQHERSNSNSNTVLYRRKSLGIFNWIGATNNFKKNGGHILKDIYNIRIYTNEEILNITQNFSTALSKSSSSDVYLGDIDDNTRVAVKVFTNVSESREEFVLQLIIQSQVQHQNIVKLFGCCLEMDHPISVCEYVPNGALCNYLVVEKGEETGERSLLDMNTCHFIALGVANAIACLHEKWLDTLNDSITPWDILLDGNFCSKLSKPTPIIINESTIMTTEVVPGSLAKAVTVVNRLPLFTSIYM</aaseq>

Gene Sequence

<dnaseqindica>1..1675#2536..2600#ATGGGAGACAAAATAGACCTCCCAGAAAACATTCTTAGAGATTATATCCCAGATGTTGACAAGGTAAAATGGATACCGGACAACAATCACAACATAACTTACTTCACAGAAGATGATATCAAAAGAATAACAAACAATTACAGCACTAAGCTTGGAAAGGGTGCTTATGGAGAGGTTTATAAAGGGGTTATTGGGGATAACCGTTTCGTAGCTGTGAAGAAATTTATTAGAGTAGATAAACTAGATGAGTTTGCTAAAGAGGTAATTGTTCATACTCAAGTCAACCATAAGAATGTAGTAAGGCTGGTTGGGTGTTGTAAAGACAAAAATGCTCCAATGATTGTATTTGAGTATGCTGCTAATGGAAACTTGAGTGATCTTCTTTATTGTGGTGATACTCCAATCTCTTTGGGCACAAGATTGAGCATTGTTATACAATGTGCGGAAGCATTAGGGTGCATGCACTCCATGTACAATCCCATTGTTCATTGTGATTTTAAGCTGTCCAATATTCTTGTGGATGAGAACTTTCATGCAAAAATATCTGATTTTGGAATATCAAGGATTCTGTCAACAGATAACACAAATCTAACTGTGAATGTGCGAGGGAGTATTGGCTACATGGATCCAACATTTGCATGGGAGGGGCGCCTCACACCAAAAAGTGGTGTGTATAGCTTTGGGGTTGTTCTTATTGAACTCATTACAAAAACAAAGCCAACAAACATGGAGAAAAATGTCATTAGAAGATTTATTCAAGCTCCTCAAAAACGGAAGGGTGCAAAGGAGTTGTTTGATGTGGACATTGCAAAGGAGAGCAACATGAAAATTCTTGAGGGTATTGGGAAAATAGCAAAAGATTGCATAAAAGAGGACATTGATAAACGTCCAGAAATGAATGATGTCGCTGCACGTCTCCGAGAGCTCAGGAAAACTCTTGAACTAGGGGGGGAAAAGACAGGTTGGCAATTCTTTTCTGGAGGTCAGAATGATTTGAAAAAAGAGAACCAGCATGAAAGAAGCAATTCCAACTCCAACACGGTTCTCTATAGGAGGAAGAGTCTTGGCATTTTCAACTGGATTGGCGCAACCAATAACTTTAAGAAGAATGGTGGACATATACTAAAAGACATCTACAACATAAGGATTTACACAAATGAGGAAATACTTAATATCACACAGAACTTCTCAACTGCTCTGAGTAAAAGCTCTAGCAGCGATGTTTACTTGGGAGACATTGATGACAATACCAGAGTGGCAGTGAAGGTTTTCACTAACGTGAGTGAATCTCGTGAGGAGTTTGTTTTGCAACTGATCATCCAATCTCAAGTGCAACATCAAAACATTGTCAAGCTCTTTGGTTGTTGCCTGGAGATGGATCATCCGATTTCAGTGTGTGAGTATGTGCCCAATGGTGCCCTTTGCAATTACCTAGTTGTGGAGAAGGGTGAAGAAACAGGGGAAAGGTCACTCTTGGATATGAATACATGTCACTTCATTGCGTTGGGGGTGGCGAACGCGATAGCATGCTTGCACGAGAAGTGGCTGGACACACTGAATGACAGCATCACGCCGTGGGATATTCTTCTGGATGGTAACTTCTGCTCCAAGTTGTCCAAGCCAACACCTATAATTATTAATGAGAGTACCATCATGACTACTGAAGTAGTACCAGGTAACTACATGTATATGGCACCAGAGAGGTTATTTTTCTCTCGGGGATTCATCACGTCTACAGCTTCGGTCAGCTGCTGCTGGATATCGTCTTTGGTATCCGTGACACCATGTTCTGGGAGGAGTTGGTGGGCAGAAAGTCATTTGACTTCGTCAATATAGTCTATCAGGAAGTTTATCTAAAGCAACGAATTGTGGACTGCCTGGATCCATGCATTATCCAGGCAGAGGCCTATGATTCTGCCAGAAGCATGGCCACAGCAGAGCACATGGTGAAAACGGCCTTGTGGTGTATGCAATTCAGTGCAGACCATCGACCCTCCATGCAGAAGGTTGTTGAGATGCTTCAGGGCACCATCGATATCGATGAACCACCCAATCCCAGTTCGTCCAATTTATATGATAGTGCGTCATACTCTAGTTGTGAACCTGTGATGAAGATGAGTTTTAATTATAGGCACAATCTGCCCTATCCTAGTAGTGATGAAGGTGAGTTTAAATTATTGTAAGTCATGTTTCAATAAGGCTGGTTTTCAAGAATCTCTCTATTGTGTAGTTATTGTAGTCTACAGCATCATTCAGAAATGTCTTGCGTGATGTATATAATTGACGACATTTACAGAAGAAGAATGAGTGATGCTAAAGGCCTAGGAGCAGGGGCAAGGTAAAAACTGTTGGAGGAATGCGTGAGGAGCAAAGTAACCTGTCAGAGCAATCAGCTTGATTATTATTTCCATGTTGTGTGTAATCGTTTTCAGAACTGAACTTACTTTTATTTGTATTTAATCTGGAACACCAGTAACCAGGTGTGCTATTATGTATTTTCTGAGAGTTAGTGTGATGTATCTTTTAAACCCTCAGGCTCACTAGCAAAAGCAGTTACTGTAGTCAATAGGCTGCCCCTTTTTACCTCCATCTACATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009929