BGIOSGA009950

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009950| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009950, complete gene.| tag = OS03G07...")
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Gene Name

BGIOSGA009950

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009950, complete gene.

LocusTag

OS03G0708700

Ensembl Transcript ID

BGIOSGA009950-TA

Ensembl Protein ID

BGIOSGA009950-PA

Length

3498

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32704069..32707566

Sequence Coding Region

32706543..32707566,32705482..32706030,32704069..32705387

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32704069..32707566 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32704069..32707566 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCTCGGAGGCGCCCATGGCGGCGGGCGCCGTCGTCGTCACCGCGGCGCTGTGCAAGAGGAGCAACCGGGTCGCGCGGGTGCTCGCCTACGCGCTCCTCGAGTGGATCCTGATAGCTCTCCTCCTCGCCAATGGCGTCTTCTCCTACCTCATATCGAGGTTCGCCGCCTTCTTCGGCCTGGCGCCGCCGTGCGCCCTCTGCTCCCGCCTCGGCGTGGACAGCCTCTTCGAGCCCCGCGGCGAGGGGCAGGGCGCCGGCGCGGAGCCCCTGTGCCGCGTGCTGTGCGACTCGCACGCCGCCGAGGTGTCGCGCCTCGGCTACTGCCGCGCGCACCGGCGGCTCGCGGACGCCGGGGACATGTGCGAGGACTGCGTGTCCGCCTCCGCGGCGGCGGCGGCGTCGTCGTGGATGAGGCGGAGCGAGCTCGGCGAGCGGGACCTGGCATGCGCGTGCTGCGGCGTCGCGCTCGAGAGCGGCTTCATCTCGCCGCCGTTCTTGTTCCCCGCGCCGGCGGCGTGCGACGTGGACTGTGGCCACAGGAGAGACGCCGCCATGGCAAATCTCAATCGCGATCTGGTCTTCGTGTCCGAGGAGGGCCCTGTGATCGAGCTCTTCGATGAGAAGCCATTGGAGGAGGACCCGATCGGCGCCATGGCTGGCTTGGCAGCTCAATGTGCCGAGATTGTTGGCAATGTCCTGCAGCTGGTGCCTCTTGAATCAGCTGATTTGTCAAATGTCAGAAAGAGTGCAGTATCATATGAATCCCGTGGTGAAGGGAATGATGCAATGGATCATGTAACTTCGAAGCAGCGCAATGTGGTGCTGAAGAACATGGCTAACACCAGTGAGGATAAATCCGCGGTGTCCTCTGATGATGATGACAAGGTGGGTGATATGGTTAGTAAGATGATCGACGAAGAAATTACTGCGTTAGTCCTCTCTCAGGATTGTATTGAGGATGGATTCAGCTGCGAGATAGATGGGGAAACCACGGAGAGCTTAGCTGCTGATCATCAACAATTTTGTGAGAAGCATAGTGGATTGAAAGACAACAACCAGGAAATTTCAATCGGGAGTGAGATACCTGAGAATGAGCAGGGTGCTGTAAAACAAGAATTGCTTTGCGTGCTGACAAATCCGAGGGGGAATGAATTTGGTATTGACAATTTAGAAGGAAATACTGAGACAGTTCATCAGGCTGATCTCAATAATGGATGGAATTCGATGCCAGTGGAAGCTGGAGTGCATGCCTCTGAAACTTCAACTGAGAACAATGAGGAGTGGATTCAGCCAGGTGAGCTGAGCCAGAAATCGAATCTGATGCCGATATACTCTAGGGAGCATGCTGATGAAGAAATTAAAGAGGACAGAATTTCACTGACTGAGATAAAACAAGGATTGGACTCTGTGACAATTGATTCTTGGGAAGAAGTTCATTTGATTTCAAATGATGGCACCAAAGAGAATCAGGCTGAACAGCCTGAGCTGAATCATCAATCAACTTTTATGACAGTACGTGCTATTGAGTATGTAACAGACTTGTTTGATGCTAACATCAGTGCAGGCAACGTTAATCCAACAGAGGCTGCTCTACCAAGCTTACATCAATTCTCTTATGGACCATCAACAAGCTTAAACAAATTATGTCCTGACTATAATGATGTTGAATCAGAGAGTGCTCCGGATACACCAATTCACATTGAAGATATCGATGGTTTACATGAGTTGCCAGACCATAAAGCAATGACTTCTGATACCAAGTCAGTTGATCTGGAAAGTATTGAACTGGTTAGTGTTGATCAGTTAAAATCTGCTTTGGCATCTGCACATAAATCTTTGAGCACCCTATATACTGAGCTTGAAAATGAGAGGAGTGCAGCTGCTATCGCTGCTGATGAGACTATGGCAATGATAAATCGCTTGCAAGAACAAAAGGCGGCAATGCAGATGGAGGCAATCCAGTACCAGCGACTTATGGAAGAACGATCGGAGTATGATCAAGATGCGCTAGAGAGGTTGAATGAACTAGTTGTGAAGAGAGAGAAGGAGATACAAGATCTGGAGAGAGAGCTCGAGTTGTACAGACGCAAGGTTCATCTCTTTGAGGTGAAGGAAAGGAGAAAAATGTCCAGGCACAAGGCTGATGACCACAATGGGTCATCCTCAGCATCATCCAGTGCTGAGGACAGCGATGACCATTCCCAAAGTTTCTATGAAGGCGATGAATCTGCCCATGGTCTTAATGGAAGCAATGGTAGTATCCCTACTGATGCTGTGTTACAAGAAACTGCTAGGCATCTGGGGACACTTGGTTGCTCACTCGCAGATTTTGAGGAAGAAAGACTCTCCATACTGGAGCAGCTCAAATTGCTAGAGGAGAGGCTATTTGACCTCGAAGATGAAGATTCAGATAGTGTTAAGATGGACAAGCGATTATCAGAAGAAAACCATTTGATGGGTGCCTCAAATGGTTTCTCTGATGATGATAGCAACTTCAAACTTCATGACAAAAGAAAAGGTGTAAGCTATAGGGGAAAAAAGCTGCTCCCATTATTTGATGACACTACCGTGGAAGATGGGAACGACCTCCTAACAAGGCAAGATCCTGAGGCAGACCATTCTACAGAAAATGTTGTGTTGGAACCAGCTAATGAGCAAGATAAACTTGCAATAGCGCATGAAATTGATCAAGTCCATGAGCGGCTGCATGCTCTAGAGGCAGACAAGGAATTTATAAAACAGTGTGTGAGGTCTTTGAAGAAAGGAGACAAGGGGTTTGATCTTCTTCAGGAGATCTTGCAGCATCTTAGGGACCTGAGAAGGATCGAGCAGCGTACAAGGAACTCTGGAGAGCTCTCACCGCATTATCTGCACCCTTACACGGATTGA</cdnaseq>

Protein Sequence

<aaseq>MVSEAPMAAGAVVVTAALCKRSNRVARVLAYALLEWILIALLLANGVFSYLISRFAAFFGLAPPCALCSRLGVDSLFEPRGEGQGAGAEPLCRVLCDSHAAEVSRLGYCRAHRRLADAGDMCEDCVSASAAAAASSWMRRSELGERDLACACCGVALESGFISPPFLFPAPAACDVDCGHRRDAAMANLNRDLVFVSEEGPVIELFDEKPLEEDPIGAMAGLAAQCAEIVGNVLQLVPLESADLSNVRKSAVSYESRGEGNDAMDHVTSKQRNVVLKNMANTSEDKSAVSSDDDDKVGDMVSKMIDEEITALVLSQDCIEDGFSCEIDGETTESLAADHQQFCEKHSGLKDNNQEISIGSEIPENEQGAVKQELLCVLTNPRGNEFGIDNLEGNTETVHQADLNNGWNSMPVEAGVHASETSTENNEEWIQPGELSQKSNLMPIYSREHADEEIKEDRISLTEIKQGLDSVTIDSWEEVHLISNDGTKENQAEQPELNHQSTFMTVRAIEYVTDLFDANISAGNVNPTEAALPSLHQFSYGPSTSLNKLCPDYNDVESESAPDTPIHIEDIDGLHELPDHKAMTSDTKSVDLESIELVSVDQLKSALASAHKSLSTLYTELENERSAAAIAADETMAMINRLQEQKAAMQMEAIQYQRLMEERSEYDQDALERLNELVVKREKEIQDLERELELYRRKVHLFEVKERRKMSRHKADDHNGSSSASSSAEDSDDHSQSFYEGDESAHGLNGSNGSIPTDAVLQETARHLGTLGCSLADFEEERLSILEQLKLLEERLFDLEDEDSDSVKMDKRLSEENHLMGASNGFSDDDSNFKLHDKRKGVSYRGKKLLPLFDDTTVEDGNDLLTRQDPEADHSTENVVLEPANEQDKLAIAHEIDQVHERLHALEADKEFIKQCVRSLKKGDKGFDLLQEILQHLRDLRRIEQRTRNSGELSPHYLHPYTD</aaseq>

Gene Sequence

<dnaseqindica>1..1024#1537..2085#2180..3498#ATGGTCTCGGAGGCGCCCATGGCGGCGGGCGCCGTCGTCGTCACCGCGGCGCTGTGCAAGAGGAGCAACCGGGTCGCGCGGGTGCTCGCCTACGCGCTCCTCGAGTGGATCCTGATAGCTCTCCTCCTCGCCAATGGCGTCTTCTCCTACCTCATATCGAGGTTCGCCGCCTTCTTCGGCCTGGCGCCGCCGTGCGCCCTCTGCTCCCGCCTCGGCGTGGACAGCCTCTTCGAGCCCCGCGGCGAGGGGCAGGGCGCCGGCGCGGAGCCCCTGTGCCGCGTGCTGTGCGACTCGCACGCCGCCGAGGTGTCGCGCCTCGGCTACTGCCGCGCGCACCGGCGGCTCGCGGACGCCGGGGACATGTGCGAGGACTGCGTGTCCGCCTCCGCGGCGGCGGCGGCGTCGTCGTGGATGAGGCGGAGCGAGCTCGGCGAGCGGGACCTGGCATGCGCGTGCTGCGGCGTCGCGCTCGAGAGCGGCTTCATCTCGCCGCCGTTCTTGTTCCCCGCGCCGGCGGCGTGCGACGTGGACTGTGGCCACAGGAGAGACGCCGCCATGGCAAATCTCAATCGCGATCTGGTCTTCGTGTCCGAGGAGGGCCCTGTGATCGAGCTCTTCGATGAGAAGCCATTGGAGGAGGACCCGATCGGCGCCATGGCTGGCTTGGCAGCTCAATGTGCCGAGATTGTTGGCAATGTCCTGCAGCTGGTGCCTCTTGAATCAGCTGATTTGTCAAATGTCAGAAAGAGTGCAGTATCATATGAATCCCGTGGTGAAGGGAATGATGCAATGGATCATGTAACTTCGAAGCAGCGCAATGTGGTGCTGAAGAACATGGCTAACACCAGTGAGGATAAATCCGCGGTGTCCTCTGATGATGATGACAAGGTGGGTGATATGGTTAGTAAGATGATCGACGAAGAAATTACTGCGTTAGTCCTCTCTCAGGATTGTATTGAGGATGGATTCAGCTGCGAGATAGATGGGGAAACCACGGAGAGCTTAGCTGCTGATCATCAACAATGTAAGGCACTCTTTCCTCTGATAAACTTGCATTCATGGTATTCCGGTTTACCAAATCTGTGGCTATAAATATCACCTGCTATTGCTTTGCCACATATGTTTTAATTGTACCGCCATTTTCACTACATATATACTAGTTCTGTTAACCATTTCGATACTACAATTTAATGCAGTTTCTCTTGCAAATTGTCATGTTACTGTGATGGGGATGTTCATTGAATACCCATGCCTAGATTTCAAATTTTAGCTATTGCAACATCGCTTGGTACTGTAGACTGTAGTTGGCATTCATTTTTCCATCTTGCCTGTACTGGCCACATTTGTACTGATGAACCTTTATTGAAAGAAAAACGTGAACAGCCTGAACTAACTGAATGTTGATAGGGTGAAATGGACGTTGTAACAAAATAGAAGTAAACTCACGCCACTAAATGTACTTCGAGTTGTTCAGTGCTGGTTGTTTTGTATATTTAATGTTACTATGCAATCTGCCTTGATTTTTGTTGCATGCAGTTTGTGAGAAGCATAGTGGATTGAAAGACAACAACCAGGAAATTTCAATCGGGAGTGAGATACCTGAGAATGAGCAGGGTGCTGTAAAACAAGAATTGCTTTGCGTGCTGACAAATCCGAGGGGGAATGAATTTGGTATTGACAATTTAGAAGGAAATACTGAGACAGTTCATCAGGCTGATCTCAATAATGGATGGAATTCGATGCCAGTGGAAGCTGGAGTGCATGCCTCTGAAACTTCAACTGAGAACAATGAGGAGTGGATTCAGCCAGGTGAGCTGAGCCAGAAATCGAATCTGATGCCGATATACTCTAGGGAGCATGCTGATGAAGAAATTAAAGAGGACAGAATTTCACTGACTGAGATAAAACAAGGATTGGACTCTGTGACAATTGATTCTTGGGAAGAAGTTCATTTGATTTCAAATGATGGCACCAAAGAGAATCAGGCTGAACAGCCTGAGCTGAATCATCAATCAACTTTTATGACAGTACGTGCTATTGAGTATGTAACAGACTTGTTTGATGCTAACATCAGTGCAGGCAACGGTAAGAAATAAGATTTTAATCATTTGGTTTGTATCTTTTGTTGACTTCTCTAGTGTGATCAACTGATCATCTTTTTTTTTTCAAATTGATCCAGTTAATCCAACAGAGGCTGCTCTACCAAGCTTACATCAATTCTCTTATGGACCATCAACAAGCTTAAACAAATTATGTCCTGACTATAATGATGTTGAATCAGAGAGTGCTCCGGATACACCAATTCACATTGAAGATATCGATGGTTTACATGAGTTGCCAGACCATAAAGCAATGACTTCTGATACCAAGTCAGTTGATCTGGAAAGTATTGAACTGGTTAGTGTTGATCAGTTAAAATCTGCTTTGGCATCTGCACATAAATCTTTGAGCACCCTATATACTGAGCTTGAAAATGAGAGGAGTGCAGCTGCTATCGCTGCTGATGAGACTATGGCAATGATAAATCGCTTGCAAGAACAAAAGGCGGCAATGCAGATGGAGGCAATCCAGTACCAGCGACTTATGGAAGAACGATCGGAGTATGATCAAGATGCGCTAGAGAGGTTGAATGAACTAGTTGTGAAGAGAGAGAAGGAGATACAAGATCTGGAGAGAGAGCTCGAGTTGTACAGACGCAAGGTTCATCTCTTTGAGGTGAAGGAAAGGAGAAAAATGTCCAGGCACAAGGCTGATGACCACAATGGGTCATCCTCAGCATCATCCAGTGCTGAGGACAGCGATGACCATTCCCAAAGTTTCTATGAAGGCGATGAATCTGCCCATGGTCTTAATGGAAGCAATGGTAGTATCCCTACTGATGCTGTGTTACAAGAAACTGCTAGGCATCTGGGGACACTTGGTTGCTCACTCGCAGATTTTGAGGAAGAAAGACTCTCCATACTGGAGCAGCTCAAATTGCTAGAGGAGAGGCTATTTGACCTCGAAGATGAAGATTCAGATAGTGTTAAGATGGACAAGCGATTATCAGAAGAAAACCATTTGATGGGTGCCTCAAATGGTTTCTCTGATGATGATAGCAACTTCAAACTTCATGACAAAAGAAAAGGTGTAAGCTATAGGGGAAAAAAGCTGCTCCCATTATTTGATGACACTACCGTGGAAGATGGGAACGACCTCCTAACAAGGCAAGATCCTGAGGCAGACCATTCTACAGAAAATGTTGTGTTGGAACCAGCTAATGAGCAAGATAAACTTGCAATAGCGCATGAAATTGATCAAGTCCATGAGCGGCTGCATGCTCTAGAGGCAGACAAGGAATTTATAAAACAGTGTGTGAGGTCTTTGAAGAAAGGAGACAAGGGGTTTGATCTTCTTCAGGAGATCTTGCAGCATCTTAGGGACCTGAGAAGGATCGAGCAGCGTACAAGGAACTCTGGAGAGCTCTCACCGCATTATCTGCACCCTTACACGGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009950