BGIOSGA009963

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009963| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009963, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009963

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009963, complete gene.

LocusTag

OSJNBA0004L11.12

Ensembl Transcript ID

BGIOSGA009963-TA

Ensembl Protein ID

BGIOSGA009963-PA

Length

5452

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32407763..32413214

Sequence Coding Region

32412076..32413214,32410346..32410430,32410130..32410192,32409812..32409969,32409282..32409357
,32409136..32409195,32408875..32408982,32407763..32407972

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32407763..32413214 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32407763..32413214 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCAGCAGCCGCGGCGGCGGAGGGGAAGGGAGCGGAAGCGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTACGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTGGTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCTGGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGACGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGCATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCCGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGAACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGATGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTTGTTAATCCTAAAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGACAAATGCTTTTTTTATGATTGGAAAAGGAGAACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAGCCAGTGTGTACAAGTTGATCCAGAGCAACGGCCTTCTGCATCACAACTTATGTCACACCCATTTGTTAATAGACCGCTTCGAGCTTCTTTTGAATCTGCATCCCCTCCTGCCATCAGCTCGTATTGA</cdnaseq>

Protein Sequence

<aaseq>MDSSSRGGGGEGSGSGSRGRSSRLERRNAVKHIDYEAAGAGAGAGASSVPACASWSSSMSADRSLGLRPSRSLDLAVGGGGTDIRISGSVEGEVDELCRSLGLSGPEEFAIPVAAWEARKERSNSDLLPRSRFVSSPPVDDPSPMARTISAPEVIQCDLPPSFPASIPEESLNSSSNSTATDSAEEPTAAALGQESPKAAPAVAAVEPLAGLPLLSPKRGGGEVGIRGARPPVLSPPQPLMALAPPPMRRSIVAKDMSGVSAWDIVNSFAPSEEKSEVRTDDERVDASHMSDTEEEEFADEGVAGVDGELKELRIGETFEGFTGTSSLSTTNDDDASSTTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFAVKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDKEESKLYIFIELVTQGSLSSLYQKYKLRDSQVSAYTRQILNGLVYLHERNVVHRDIKCANILVHANGSVKLADFGLAKEMSKINMLRSCKGSVYWMAPEVVNPKKTYGPQADIWSLGCTVLEMLTRNIPYPNVEWTNAFFMIGKGERPQIPSYLSKDAQDFISQCVQVDPEQRPSASQLMSHPFVNRPLRASFESASPPAISSY</aaseq>

Gene Sequence

<dnaseqindica>1..1139#2785..2869#3023..3085#3246..3403#3858..3933#4020..4079#4233..4340#5243..5452#ATGGACTCCAGCAGCCGCGGCGGCGGAGGGGAAGGGAGCGGAAGCGGGAGCCGCGGGCGTAGCTCGCGGCTGGAGCGCCGCAACGCGGTGAAGCACATCGACTACGAGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGTCGTCCGTGCCGGCGTGCGCGTCGTGGTCGTCGTCCATGTCGGCGGACCGGTCGCTGGGGCTCCGGCCGTCGCGCTCGCTCGACCTGGCCGTCGGGGGCGGCGGCACGGACATCCGCATCAGCGGCAGCGTGGAGGGGGAGGTCGACGAGCTGTGCCGCAGCCTGGGTTTATCGGGGCCGGAGGAGTTCGCGATCCCCGTCGCCGCATGGGAAGCCCGGAAAGAGCGTTCTAACTCCGACCTACTACCGCGCTCCCGCTTCGTCTCCTCGCCACCCGTCGACGACCCCTCTCCCATGGCCCGCACCATTTCCGCCCCCGAGGTCATCCAGTGCGACCTTCCTCCCTCATTCCCTGCTTCAATTCCTGAGGAGTCCCTCAATTCTTCCTCCAATTCCACCGCAACTGATTCGGCGGAGGAGCCTACCGCTGCGGCGCTCGGTCAGGAATCCCCCAAGGCTGCCCCTGCCGTTGCTGCTGTGGAACCCCTCGCTGGATTGCCCCTGCTATCGCCAAAGAGAGGAGGCGGCGAAGTCGGTATCCGAGGAGCCCGACCTCCTGTGCTCTCCCCGCCTCAGCCGCTCATGGCACTCGCACCGCCGCCAATGAGGCGTTCAATTGTGGCTAAAGACATGAGCGGGGTGTCGGCTTGGGATATTGTGAACTCGTTTGCTCCCAGTGAAGAGAAAAGTGAAGTGAGAACAGATGATGAACGCGTGGACGCGTCTCACATGTCGGACACCGAGGAGGAGGAGTTTGCTGACGAGGGAGTGGCAGGGGTGGACGGGGAGCTGAAAGAGTTAAGGATAGGAGAGACCTTTGAAGGGTTCACTGGGACATCATCATTGTCAACAACAAATGATGATGATGCATCCAGCACAACTACGGAGGCTATGTTCATCATCTCACCAAATGGAAAGTTCAAGAGGAAGATTAAGTCGTGGATGCGTGGTGCTCTTCTGGGGAGCGGCTCATTTGGGATGGTGTATGAGGGCATCAGTGAGTAAGTACTAATAATGCTTTAGTTTTTATTTGGTGTTTGCCCATATCATCTTTGCTACTAGTACTACTTATCACAGGGTACTGCAATCTTTTGTCTAATTTAAGCATATTTTAAAAATAGACTGTTATGTCATAGCTGGCCTTAGCTTACAGTTATTTTCATGAAAGATAAATCTTAGCTAGTCCAAACAATCCCCTCGTTAGAAGATGGGCAAGGCTCTTTTTTTTATTACCTAAAACTTAGAAGTGCATGCTGTTATATAATGAATTCTACAAGTAGAATACTAGAATGTCAAATATTTATTTGGGAATGTCTGTGTAGTGTGTTGGTACTGGGGTGATTGGGAGTGGGACAAGAATACCATTCTGTCGCCCTTAGACCTGTGGCTTAGTTCTTTTCTTCAACTTTAACCTTGAACTTCCTCGTTTTCCGTTAGCACGCTTTTCAAACTGTTAAATGGTGTGTGTTTTTCAAAAAAAAAATCTATATAGAAGTTGTTTTAAAAAATCAAATAAATCCATAATTTATGATAGTTAATACTTAATTAATCGTATGTTATTGAGCCTTTTCGTTTTGCATGCGGGGAAAATTTTGCTCCAACTTGAAGCAACGAACGGGGCCAGTTATAGGAAAAACCCAGCACAGTTCTGCCATGTATTGATTTGGTGTTGTTAAATCATTTCCCTCACATGACAGGAACGTATTGTTGACATGGTCTGAAATTATAATATTCTAAAACACAGCTCCTTTAGTCTTATGCCCTGGTGCTACATTTTGTATGAATTTATCTCCTGGTGCTAATTTTCTACTCTTTTGTCCTGGTGTGACTTGTCAATGCAATGTGGGTATGGGCATTATTCATTCAGCAGTCCATATAGATTGCCCTTTCTGTAGCCAGTCGACAGATATGCGCTGGAGGTTTTACTGTTGCATCATAATTTATTTTTTGAATGATTATGCCATGAGAACTGAAGGGAGAAAATATTTTTATTTGACTTAATCCCTTCAGTCATAACAATGGCATAAAGTACATGCTCTGACCTTTAATGACTGAATTTGATTGATACTCGGCCATTGATTTCGATTGGGAGTATTTTGATTTTAACAAGTCAAAAATTGTAGATTCTGACCAACAGTTAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGCTTTTGTACAATAATGGTTTTATAGATTATGAGAAATCATGCTCAAAATTTACTCTTGAAGACTTTTTGAAATTAAAATATGCCTGATAAAAATCAACAACGGTAGTACCCAACTACTTGGCTATAGTACTCTCAAATAGGCAGCATTTTGCATTTGTGCTACAAAGGCTACAATGTCATGAGGAAAGGACCATGGTAGCTGCAAGTTGCAACATTGTGAAGACTTGATTATGCATATACAGTGAAATATTATTGGAACCTAATGGCTTCAGGTTGTAAGTTCTTAGGACTGAGATAGAACATATTTTTCACCTGGTTATATTAAAACTTCAGTCTAGTCGCTTAGAGTAGTGTAAAGGATATTATTCTTTCTTGTTGCTGTACCATTTGAAGAGCATGCGATGTATTTAAAAACATTAAATGATGTCCGTGTTGAATGTCTTTACAGTGAAGGAGCGTTTTTTGCTGTGAAGGAAGTATCTTTGCTTGACCAAGGAAGCAACGCACAACAATCTATTCTTGCACTTGAACAGGTTTTTTTGCTGCGGTTCTTCATCTGTTACAGTTGATTTTTATTGTGAATACCACTGTTCTAATGTTGTACTGTTGTCTTTACTATATTGTACCGCTTTGACATGCTTTGGCATCTTCTGAAACTATCTAATTTTGAGTTGTTGGGTTCTCAGGAAATTGCACTCCTAAGTCAGTTTGAACATGAAAATATAGTCCAGTATTATGGAACTGACAAGGTACCCCCACTGTTCTTTTGATGTTACTCAGTTATTGATTCGGTTCTAGAAATAGTTTTATGTAAGCAGTCAATACACAATATACACTTTTTTTTTTCATTCATGTATGTTTGTAATGATGTCCATTACTCATGTAATTCATTCAACACTTCTAATGCAGGAAGAATCAAAACTGTACATTTTTATTGAGCTTGTTACACAAGGTTCTCTATCGTCCCTCTATCAAAAGTATAAACTACGAGACTCACAAGTGTCAGCATACACAAGGCAGATTCTCAACGGATTGGTTTATCTCCATGAGCGAAATGTGGTTCACAGGTATAAAGATGCTTCTCTTATATTTAGCATTGAAAATAATTCAATGCTTATGATGCTGCAGATAACTAAAGGTGGTCTTTTGAGCTCATTTGTCATACATTTTAAATGCGAATAGTGATACATCTGCATTCCCTGAAGTCAGTATATTGGTCTGAAACGAACATCAACTGCTCCACCTTCTCTAGAAAGTGGCATGCACCACAGGGCCCTGGGGGTTATACATGTCCTGCTGACTCGAAAAGAGTTTCTTATTGGAACCTAGAAAACCACACCTTTTTCTGGACTGTGCAGATGTAGTAACAAACTGGGCAAGCTAACTTCTTACAATATTTATAAAAAAAATAAATGAGGCATCACGCTATATTCTTAACCGTGTGTGTCATTTTGTTTTTGCATCAGATATTGTTGATGTTTCCATTTGATACATTTTCTAATTGTTATTTTTCATTTTCAGAGACATTAAATGCGCAAATATACTGGTTCATGCAAATGGATCAGTAAAATTGGCAGACTTTGGGTTGGCGAAGGAGGTTAGCTTTTTTTTTTTTGTATGAATATTAGTGCTTTATCTATGATGCTGTCTTACGGTGGTAATTTTCTTCTTGTTGGATTTCAGATGTCAAAAATTAACATGCTGAGATCATGCAAAGGAAGTGTTTATTGGATGGCACCTGAGGTAAAAGTTTATTTATCCTATGCTATTTACTTTTATTTAATCATGATTCTTGCGGATCTGACTAATAGTATGATGTTGTTTTCCATTATTTAATGATACTTATGTCTTGGCCATAAACTGTGAAAGTGCTAAATACAACTTCTTATTTTTCAGGTTGTTAATCCTAAAAAAACATATGGGCCCCAGGCTGATATTTGGAGTCTTGGCTGCACTGTATTGGAAATGCTTACTCGTAACATACCATATCCTAATGTGGAGTGGGTATGTCATACTTTGACTTTAAAGTTTATAGTTCTGTTAATGCTCTTTTTATGTGTTAGTCCCTGTTTGATTACAGCATTAAATTTATGTCAATGCTCTTTTTATGTTCTTTATTGAGTAAAATTCAAGAAACTACAAATATTTTTAGATGAATATCACAAGTACTACAGATTTAATACACTGTATGGGAAATCTTTAGTTTTGTGTTAAAGCTGGCGCTGGATTTGTAGTTTTCTGAGATTATGCCTTAAATCTGTACTTTTGTGATATATTTGGTGCTAAATTTGTGTGCGTGTCTTTTGCAAGACAGGGACTTGATTTGTAGTTTTATGATAGTTTTGCAAGCATCGTTTCTTAGATAATGGATAAAGTACAAACCAGCTGCATTTAAGATGCACAAAGCCACAATCAATTATTACAGTAGTTTCACACACCACTTTGGAAAGATAAAAATGTGCAGCAAGTTTAACAAGTATCTATGGTTTTGAGAAATTTACTCATCTTTATTTGACTGTAAAATGAAGGGTAGGACCTTTAATTAATTCGATACTGAGATGTGTGAGCTGCCCATCCACTTTGGGATGCTTCTGTGACAGCATAAGGGAAATTTGTTGTTTTATTTCATTCCAATCCTAAATTATATGATAGGTATAACTATTGTAAATTGTAGTTGCTAACCAAAGATAACCTTGTGGCTGCAAAGTTCTGGTTAAATAGCACTTTCTTCTGACGGGCAGCCTTCCCTTTATTTCTTGTTCTCTGTGGGAACATAGCATTATTAGTCTATGAAATTATTTTGTGTTAAAATTTACTTTAATTCAACTAATGTTCTTTTTAACTTGCTTCGGTTGTAACTCAAGTTTATCTTAAGCACTCCACTTATGTTGATTTGGTATTTCCAGACAAATGCTTTTTTTATGATTGGAAAAGGAGAACGACCTCAAATTCCCAGCTATTTGTCAAAAGATGCTCAAGATTTCATTAGCCAGTGTGTACAAGTTGATCCAGAGCAACGGCCTTCTGCATCACAACTTATGTCACACCCATTTGTTAATAGACCGCTTCGAGCTTCTTTTGAATCTGCATCCCCTCCTGCCATCAGCTCGTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009963