BGIOSGA009964

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009964| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009964, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009964

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009964, complete gene.

LocusTag

OSJNBA0004L11.13

Ensembl Transcript ID

BGIOSGA009964-TA

Ensembl Protein ID

BGIOSGA009964-PA

Length

5286

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32398918..32404203

Sequence Coding Region

32404096..32404203,32401871..32401962,32401062..32401212,32400526..32400657,32400263..32400412
,32399429..32400115,32399153..32399322,32398918..32399053

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32398918..32404203 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32398918..32404203 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGACGGCGCAGCAGCAGCAGCAGAAGCAGCAGGGCGGGGTGGTGCGCGTGGACCAGGCGTCGCCCGCGTCCAGCTTCCGCGAGCTCGACGACGCCTTCCTCCAGACACAGACAAAAATCTGGCTTGGTGAAGTTCTCCATCTTAGGTTTGATGAAGCCGTTATAGTTGCAGACCTTCTTGCTGATGGAGAGTTACTATTTCAAGTTTCCAAAGTACTGTGGAAAAGGCTTGTGAGAATGAACAAAGAACAAATGAAGCAATCCAAGGTGTATATTTATGAGAGAACATCGTCTGGTAAGAGCAATGGAAAATACATGCCCTATCCAAAAGTTGACTCGTTTTTGAAGATATGTCAAATTCTCGGGTTAGCTGGAATTGATTTGTTTACCCCTTCTGATGTGGTTGAGAAAAGAAATGTTCGGAAAGTTTGTATGTGCATACGCTTGCTATCTAAGAAGGCTCGGACGATGCGCCTGACTGTGCCTGATTTTGATATTGTCACTCATACAATAGCCATGCCCAACTACATTGTTGGAGGCATCCGGAGAAGTCTGGAGCAACCACAATGTAGTTCATCTGGTTCAAGTGGTTACAGTCCAAGTGCCAACTCTAAGGCATTAAATCAGCAGAGAGTTTTTGGTGCAGAGAATGATCAACAATGTGAAACACATTATGATTCTGATGAAGCTGAAAGTAAGCTCTCTGCATTAGAACCTGAGGACTCAGTCAGTGAAGATAATATTTCCACACTTTTGAAATCGGGCAACATGCCCAAGGAAGAAAAGGAAGGCTATGGAGATAGTGAGCATGGTATGCATGAAGAGAAGTCATTGTCTGAATCAGTTGGATCGATTGATTTCGGCAATATGGAATCTGATTCTGTTGGTTCAACTCCTTTATTTCACAAAAATGAATCATATTGCTGTATTGAATCTCCAACTGACCAGTGTTCAAGAACTAGAACAATTAGGTGTTCATTAAGTTCAGAAGAGTCAGATTCCATAAGCAGTCATTTGGTAGTTGACAGCAGCAAGGCTAAAAGGACTCATGGCGAACATCTCGAGCCTCTTAACGGAAATGGGAAAAGATTTGCTAACGATCCCGAAAAAGAAAGCGATGCCCTCCAAAAGGTCACCTTTGATCAACAATGTGATATGCTTGCCTGTGATGGGGAGTCTGTATGTTCAAATTGCGACAGTACACCATACTCGAGTTTAACCCCAATAGACAGTGCTTGTGGCAAATTGCCAGCAGTTTCTGAAGATGATAGTGCATGCCGAGGGCTGGAACTCGAATTCCGTTGTGGGAATGAAACGGACGTTTCCCAAAAAGAAGATAAACAGGTGGAATCAGAATATAAAGCTGAAAATGACAGCTCTGCTCAAATGAATGAGAATGATGTTCCCAAATCAGGGAAAGGGATGCTAAAGTCTGTTGCTGGAGGAATTACACTTGTCGGCGCAGTGTTCTTCATAGCTCATCTCAGAAGGAGCAAGGACAGAAGCTTCGCAGGTGTTATAGCTCCATTCTCTGAAAAATCAGTTCAGGGCGACTCAAGGGCAAAGAAAGTAGAGAAAACAAAGGCGGGTGCCGTGTATCCCGGGGAATGGCTAAAAGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MRTAQQQQQKQQGGVVRVDQASPASSFRELDDAFLQTQTKIWLGEVLHLRFDEAVIVADLLADGELLFQVSKVLWKRLVRMNKEQMKQSKVYIYERTSSGKSNGKYMPYPKVDSFLKICQILGLAGIDLFTPSDVVEKRNVRKVCMCIRLLSKKARTMRLTVPDFDIVTHTIAMPNYIVGGIRRSLEQPQCSSSGSSGYSPSANSKALNQQRVFGAENDQQCETHYDSDEAESKLSALEPEDSVSEDNISTLLKSGNMPKEEKEGYGDSEHGMHEEKSLSESVGSIDFGNMESDSVGSTPLFHKNESYCCIESPTDQCSRTRTIRCSLSSEESDSISSHLVVDSSKAKRTHGEHLEPLNGNGKRFANDPEKESDALQKVTFDQQCDMLACDGESVCSNCDSTPYSSLTPIDSACGKLPAVSEDDSACRGLELEFRCGNETDVSQKEDKQVESEYKAENDSSAQMNENDVPKSGKGMLKSVAGGITLVGAVFFIAHLRRSKDRSFAGVIAPFSEKSVQGDSRAKKVEKTKAGAVYPGEWLKV</aaseq>

Gene Sequence

<dnaseqindica>1..108#2242..2333#2992..3142#3547..3678#3792..3941#4089..4775#4882..5051#5151..5286#ATGAGGACGGCGCAGCAGCAGCAGCAGAAGCAGCAGGGCGGGGTGGTGCGCGTGGACCAGGCGTCGCCCGCGTCCAGCTTCCGCGAGCTCGACGACGCCTTCCTCCAGGTCGGTCGCGGTGCCGGCGAAATGCGCCGTGTACTGAACTAAATCTTGTGTGTGCTTCAGTCGGGTCGTCGGAGACCGGGTTAATGGAACAGTAAAGGCCGTGGCCGGCCGGTGGCTCTGTTCGCGACGGCCGGCGTTCGTCGGCGCCGTTCTCTCCAATGGGCGCCGGAGATGCTCCAGTGATTCGAGCTGCCTTCAATGAGTTCATGGCTTGATGCTATCTGTTTCGGGTTTTCCATCCGCATGTTGTATATGCGAGATGTTTAGGATTGGTTTCTCTGATTTCACGGACTCCAAATGGCATATGCGGGTTGATTTCTGAAGTTACTAAACTGCCGTGTGATTGCTCTCTCCTCTTAGCTAATTCAAAATCCAGTATCAGGCATTTCATGTTGTTCATTTTTCTAGTATGAGAAGTTCAGAACGACGGCGAGAGGATTTGTGAAGAGGCAAAGGCTTCGACACCATTGCCGCTCTTGTTTTCATTGATAGTAGAGTTTTCAAGAAGAACATGGTGGCAGCTCTTCAAAGAAATCACTGAAGAAGCAGTTGTGCTGGTGCAGGAGTTTCAGAAGTTTGAGTAGTTCTTTACTGCATTTCGCCGTCCTTTTTATCGCAAAATTAGTCGTTAGATTCTGTCTAGATTTTTCTCATTTTTCAATAATAAGCGAGCCTCTTGCGTATTTAAAAAAGGGCCATTTGCAAATTTACCACCGTTTTTTTTAAATTTTACAAGGATGCCACTCGAATGACAGTTCTAATGGTATTTTTTTAATTTTCTAGTGGCAGTCTTGCAATAACGATTCAAAGCAGTGGTAAATTTGCAATTGCCCCTTAAAAATAAGTAATATATGAGGAAGTTGCAGGGGGGCAAACGAGAATGGATTACTAGTTGACAAGATTCTGTGTGGTCATGGTTGTACAAGATTCTTTTCAACTCTTTCTTTGTCTTTTCTAGGGCAAAGGGTTATTTTGTACTCCTACTTGCATTTCATATCCTCCTAGGTTTTTTCAGAGCCAGAGTTGAAAAATGGTATAAAAGGTAGAACTGAATGGTATTGGTATTGATTAGCTCATGTTGAAGTATCTTTTGATAAATTTATTATGTTACCAGTCTTAGCAGCTGTTGCTCATTTGTCAAGTACCGAAATGGCCAATGCTTGAATCACTTTACATAATATTGTTAACTTAGTCCTTGTGTGGTGCTCAACGTACTTGGCAAAAAGATTACAATGATGTGCTTTAATATTTATCTTACAAGAAATTACACAAAGTTAGTCAAAGACATGAATGCAGCCACTACGTACTACTGTAGCTACTGCAATAGTTTGGGATGTTAAGGAGTATATTTGGACCACAAACTTTCAGGTTTACTCTACATTTTTTTTCATTAAAAACTGTGAGCGATAAGTATGAGATATACATTCCATTCGACATTTTAAGATCTGTTAAACACTTAAACTTAAACATCAAATTTTGAATGGGATATATCTAACTTTATTACTTGCAAACATATACTAAGTTATATTGCACACAGTGTTATGGTACAAATATATATCCTGGACACAACTACAGTTGTTCATAATTTGTACACTGTCACTCTCAACCCTGTACTTCTATATTATTTTCTTCAGGAATTGGTGATTACGAAGATCATCTGATATCCTTATTTAAGATAACATATTAAACCTTTTCTTTTGCTTATCACCCATCTATTATAAACAGTCTTATAGATATTGGGTCTACTGATCTGTATAAAGGATATGGTTACCTTACTTATTACTGTATAGGAGTAGTTACCAATGCAGATGCATTATCGGTCGTTTAGGCAGGTCAGTACCTGCTACCAATTTTTACAATATTTTTTTTCGCCGGGCTGGCAAAGTCGCCAGCCGGAGTATATTAAGGAGTGCAAGAATATATCTTGTTTCCTACCATGCCAAGCAACAGAGCACAGGGCGCACTACAACATATATACAGAACAACTTCTAATTACATACAAGCGGGGCAACCCCGAAATATCTCAAAGCCTTCAATTACACCTTTATTAAGTAAAAGCCTACAATTACACCTTTATCATACTTTTAGTCATCCTTATTATCCTGATTTCTCAGTTCAATTATGTTCTTTCAGACACAGACAAAAATCTGGCTTGGTGAAGTTCTCCATCTTAGGTTTGATGAAGCCGTTATAGTTGCAGACCTTCTTGCTGATGGAGAGTTACTGTAAGATTTAGGTTCTTCACAATAGATGCAGTGTTTTTTATTTGTATTTATAGTACTGTCTAGCATGCAATCCTGATACTTGGTGTCACTTGGTTGGCTTTTGTAAGAATTTACAATTCTGTAACTCTACATGGTAAAATTACACAAATATAAGATCAGAGTCACTAATATACTTCAAATGATAGGTAGTTTTGGCTATATGAAATTAGTAATTAGCCTTAAGTTTCCACTATAAAGTTTCAATGCTGTAATTGTACATGGTAAAATTACACAAATATAGGATCAGAGTGACGAATACTATACTTCAAATGATAGGTAGTTTTGGCTATATGGAATTAGTAATTAGGCTTATGTTTCCACTATAAAGTGTTACCCAGAAAAAAATCATATAATTGGCAAATGATACAATTTATTGTTGGGCAGCAAGCAATTCAGTTCTATATTACATTTTTTACATTTTCCTATTCTAGATATGTTCTATCTTGAAACAACTGAAGGTAATTCTTACTTAGAGGAGCAATGAAATAAATTACTATCATATTTATTCTCTTATTTTTGGGAAGAATAAAAAGACAGCCCTCTCCCTGTGTTTCCTTTCCAGGCTCTAAATCTCTTTTCAGGCTGTCTAATGGCTTACTTGTTTAATGCATGTTGACAGATTTCAAGTTTCCAAAGTACTGTGGAAAAGGCTTGTGAGAATGAACAAAGAACAAATGAAGCAATCCAAGGTGTATATTTATGAGAGAACATCGTCTGGTAAGAGCAATGGAAAATACATGCCCTATCCAAAAGTTGACTCGTTTTTGAAGGTATTGACCATTGGATGCTCTCTTCTTAGCAGCTTACTTTAGTTACTATCTTGATTCAACTTCAAGCGCATTAATTTGGATAACAGTAGAGCGAAAGAATTCATGGGATTTTTTTTTGCCATCACACATACATTTACTCTTTCTCTTTTCATTGAAAGAGTGCTTGTTAATGGTGTCAAACATTTCTATTCTAGCCGAGAAACTGGTATAGATTCTCCAAATATTCTTAACAAAGCTTTACTTTCTATAAATTGGATCGAAATCATTTTTTATGTGCAGAGTACATGCTGAATCTGGATGGCTGTCTTGCTTCTGAATTCTGATAGCATTCCCATATCTTTTACTTTCTTGATGTTTGTTTTCCCTTCTGAAAGGTGGCTTGATATGATATTTTTCCTTTCCAGATATGTCAAATTCTCGGGTTAGCTGGAATTGATTTGTTTACCCCTTCTGATGTGGTTGAGAAAAGAAATGTTCGGAAAGTTTGTATGTGCATACGCTTGCTATCTAAGAAGGCTCGGACGATGCGCCTGACTGTAAGCCCTAGATTCTTATGAAACCATTTATTAAAAATAATTCAATCAGCTAATCATTGCACAATACACATCCTGAAAGATTTAATTGGTGTGTTTCTGCTCTCTGGTGACAGGTGCCTGATTTTGATATTGTCACTCATACAATAGCCATGCCCAACTACATTGTTGGAGGCATCCGGAGAAGTCTGGAGCAACCACAATGTAGTTCATCTGGTTCAAGTGGTTACAGTCCAAGTGCCAACTCTAAGGCATTAAATCAGCAGGTAAGCTCTTTGAAAGGATCAGTTTTTTTTTTTTGGGGAGAAAGGATCAGTTTTATTGGCATGTTCTTGCTAATTGATCCTTTATTTTAAGTCAATACTATCATTGTTTAAAACAATCAACTCATTAATTTTGATATATATTTCCAGAGAGTTTTTGGTGCAGAGAATGATCAACAATGTGAAACACATTATGATTCTGATGAAGCTGAAAGTAAGCTCTCTGCATTAGAACCTGAGGACTCAGTCAGTGAAGATAATATTTCCACACTTTTGAAATCGGGCAACATGCCCAAGGAAGAAAAGGAAGGCTATGGAGATAGTGAGCATGGTATGCATGAAGAGAAGTCATTGTCTGAATCAGTTGGATCGATTGATTTCGGCAATATGGAATCTGATTCTGTTGGTTCAACTCCTTTATTTCACAAAAATGAATCATATTGCTGTATTGAATCTCCAACTGACCAGTGTTCAAGAACTAGAACAATTAGGTGTTCATTAAGTTCAGAAGAGTCAGATTCCATAAGCAGTCATTTGGTAGTTGACAGCAGCAAGGCTAAAAGGACTCATGGCGAACATCTCGAGCCTCTTAACGGAAATGGGAAAAGATTTGCTAACGATCCCGAAAAAGAAAGCGATGCCCTCCAAAAGGTCACCTTTGATCAACAATGTGATATGCTTGCCTGTGATGGGGAGTCTGTATGTTCAAATTGCGACAGTACACCATACTCGAGTTTAACCCCAATAGACAGTGCTTGTGGCAAATTGCCAGCAGTTTCTGAAGATGATAGTGCATGCCGAGGGCTGGAACTCGAATTCCGTTGTGGGAATGAAACGGTACCTCCTGAAATGCCAAACCTGTATATGCTAGTACTACTTTTAACATAGTCATCATTTTGTCTCATGTACAGCAAACACGCTTTAACATTTCTTTGGCATCCAGGACGTTTCCCAAAAAGAAGATAAACAGGTGGAATCAGAATATAAAGCTGAAAATGACAGCTCTGCTCAAATGAATGAGAATGATGTTCCCAAATCAGGGAAAGGGATGCTAAAGTCTGTTGCTGGAGGAATTACACTTGTCGGCGCAGTGTTCTTCATAGCTCATCTCAGGTAATGGTACCACAGTATCAAATTATCGTCGTGTGCCGTTTGGTGTACTGAACACTAATACTCCTATATATTATGAAATTAATCCAAACTTTGCTGCAGAAGGAGCAAGGACAGAAGCTTCGCAGGTGTTATAGCTCCATTCTCTGAAAAATCAGTTCAGGGCGACTCAAGGGCAAAGAAAGTAGAGAAAACAAAGGCGGGTGCCGTGTATCCCGGGGAATGGCTAAAAGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009964