BGIOSGA009972
| Gene Name |
BGIOSGA009972 |
|---|---|
| Description |
Pinin/SDK/memA protein |
| Definition |
Oryza sativa Indica Group BGIOSGA009972, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA009972-TA |
| Ensembl Protein ID |
BGIOSGA009972-PA |
| Length |
5736 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:32330211..32335946 |
| Sequence Coding Region |
32335557..32335946,32333751..32333852,32333204..32333326,32333021..32333137,32332686..32332757 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome03:32330211..32335946 source=RiceIndica03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome03:32330211..32335946 source=RiceIndica03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGACAAACCCTAAGAACTCTGACACTGGCATCGACAAAAACTGCTTCATACGTGCCTACCAGGCGGTGATGGTGCCCAAGTGCGGCTACATCCGCAAGGCCATCGCGGCGGCGCGCGGTGGCATCACCACCACCGTCGAGTTTGACCTCTCCACGCTGCCCGGCGGCGTCGATGCCTTCGACAAGGCCGCGCGCGACTGCTACGGTGCCAACTTCCAGCTATCAGTGCGCAACGCGGCCGCGCTTCTCTGCGCCTCTGCCTTCCTCGACATGCAGCCGTCGTTGGCCCGGTGGCCGGACGCCTCCATGCGCCCCCGGTCGTGGCGGCAGGGCAGGGCGCCCTGGTTGCGGCGGCACGGCAAGGCCTCGGCCCCGGCCTCGCGCGGCGAGCCGAAGGAATCCTCGACGGCGACGACGATTGCCGCCGCGACGGAGAAGACGGCCGAGGAGATCCGCCGCGAGCTCCAGGAGCTCCAGCGCCAGCACCGCGAGGTGGAGGATACTGAAGCTAAGGAGGATGTCAAGAAGGAAGCGGAGGCAGAGGGGCCGGAGGGCGGTTCGGCTGCTGCTGAAGGCGGTGAGAGGAGGGATGGGAGCCAGCGCATGCCGAGGAGGGAGCTTGATATGTCATTGCCAGAACCTCTCCCGAGGGAATTTCCCAAGGATGAGGATCAAAGTCTTGTGAAGAGGAACAAGAGGATGCTGGGGAAGCTTCTTGTCGGTACATTAGAGAAATTTCAGCAAGAGGACAAAAAACTGTCCAACACAGAGGCTTATATGCGCAGATCAGAGGTTCAGCGAAAGGCTGATCAAAAGGCTCGTGAGGAAAGTGAAAGGTTGCGGCAGCAAGAGCGAGAGCAAGCAATAGAGAAGCGTAAGCGTGATATGATGCTGCGTGCTCGAGTAGCTGCTAAGGCAGAAGAAAAGAGGTTGGAGCTGTTATACATGCAGTGGGCTGAGCATCACAAAAAGCTGTCCAATTTCTTAAGGACAACTGCGGAACCACCAATTTACTACATGCCAGCTAAACCAATAATTGATGATCCGGCTATTGCTGAGGAGAACAAGGAAAAGGCATTTCAAGAATGGAAATCTGAACGCAGGGCTGAGCTGACTCAGTTTCAAAAGCAAGTCGAAGAACAGTACATGTCTAATGTTGAGAGGCAGTTGGAAAGGATGCAGAATGCGCGGAATGCACGGAGGGGTAATGGTCCTTCAAACATGCAAGAAATGGACAAGGAGCTGGACACGCACAGGGCGGAGCATGGTCCAAAAACTCGACGAGTTCTTGAGGGTGGCAATGACGATGAGGATGATATGGACGATATGGCCGTGGAAGATGAGCTGATGGATGAAGTCCTTGGCATTAACGAGCCAATCAGCGATGAGCAAACCAAGCCGTCTGAAGAAGCTGCTGATGGTGTTCCGGTGTCTGAGGAAGTGCAATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MTNPKNSDTGIDKNCFIRAYQAVMVPKCGYIRKAIAAARGGITTTVEFDLSTLPGGVDAFDKAARDCYGANFQLSVRNAAALLCASAFLDMQPSLARWPDASMRPRSWRQGRAPWLRRHGKASAPASRGEPKESSTATTIAAATEKTAEEIRRELQELQRQHREVEDTEAKEDVKKEAEAEGPEGGSAAAEGGERRDGSQRMPRRELDMSLPEPLPREFPKDEDQSLVKRNKRMLGKLLVGTLEKFQQEDKKLSNTEAYMRRSEVQRKADQKAREESERLRQQEREQAIEKRKRDMMLRARVAAKAEEKRLELLYMQWAEHHKKLSNFLRTTAEPPIYYMPAKPIIDDPAIAEENKEKAFQEWKSERRAELTQFQKQVEEQYMSNVERQLERMQNARNARRGNGPSNMQEMDKELDTHRAEHGPKTRRVLEGGNDDEDDMDDMAVEDELMDEVLGINEPISDEQTKPSEEAADGVPVSEEVQ</aaseq> |
| Gene Sequence |
<dnaseqindica>1..390#2095..2196#2621..2743#2810..2926#3190..3261#3902..3985#4093..4193#4504..4588#5362..5736#ATGACAAACCCTAAGAACTCTGACACTGGCATCGACAAAAACTGCTTCATACGTGCCTACCAGGCGGTGATGGTGCCCAAGTGCGGCTACATCCGCAAGGCCATCGCGGCGGCGCGCGGTGGCATCACCACCACCGTCGAGTTTGACCTCTCCACGCTGCCCGGCGGCGTCGATGCCTTCGACAAGGCCGCGCGCGACTGCTACGGTGCCAACTTCCAGCTATCAGTGCGCAACGCGGCCGCGCTTCTCTGCGCCTCTGCCTTCCTCGACATGCAGCCGTCGTTGGCCCGGTGGCCGGACGCCTCCATGCGCCCCCGGTCGTGGCGGCAGGGCAGGGCGCCCTGGTTGCGGCGGCACGGCAAGGCCTCGGCCCCGGCCTCGCGCGGCGAGGTAGGCGAAGCTGCGAGGCAGCCGCCCGGTCCCCTCCCCACCCGCGGCTGCCTGGCACCTCTCCAACCTGGCGTGGCGGCGGCGGCTCCCAGCTAGCTCCGGCCTAGCGCAGGCGAGGGAGGCGAAGCTGCGAGGCGGCCGCCTGGTCCCCTCCCCACTCGCGGCGGCCTGGCGCCTCTCCGGCCTGGTGTGGCGGCGGCCTGGCGCGGGCGAGGAAGGCGAAGCGGCGAGGCGGCGATGCGACCACGGGGGATTTGGGCGTCGGGCGGTAGGAAACGGAGAGCGTGGGCTGAAAACGGAGGCTGCAGGTGGGCCGGCGAAGCAGACCGTTCGATTAGATTTCAACGCTCCAGATCGCTCCAATGTCACACCATGCCATGCCATAACAATTTCACTGAATTCGAATCCCTACAACACGTTCATCACCGCCGCGACAGCTATTCCTTGCTTGCGCTGAGGTCTGCTCGTCGTCGTGTGTGTTCATGCAGGGAAAAGGAGGATGTAGGAACACTCAAAAAAGTAAGAATAGAAAAGGAATAGGAGGCGCTGACATGTGGATCCTACATGCTGATTCAGCATGTTAGACTAAGTCAATGAGCCATGTCAGCAAGAATCGCTTTCAAAACCACCGAGTGATTTTGTATCGGTTTTAACAATTTGGGGTTCAAGATATACGGTTAAAGGTTACAAATTAGATTGGACCTATATTTAAGGGAGTCAAAGTGGACTTATTCTCACCTAGCAACACTTGAGTTTCCCAACTCAATCCTCTCGTTTTCTACGTGCACGTTTTTCAAACTGCTAAATGATGTATTTTTTGCAAAAAAAACCCTATAAGAAGTTGCTTTCAAAATTATATTGATCCATTTTTAGAAAGAAAATAACCAATACTTATTTAATCATGCACTAATAGACCGCTCCATTTTATGTGCAGGAGGATTTGTTCCCAACTGCATCTACCGAATGCAACCTTATTTTGACAGGTAACCAGGAAGGCAGCAGGCCCGGCCTGCTCCTGGCCAGCATGTTAGACTAAGTCAATGAGCCATGTCAGCAAGAATCGCTTTCAAAACCACCGAGTGATTTTGTATCGGTTTTAACAATTTGGGGTTCAAGATATACGATTAAAGGATACAAATTAGATTGGACCTATATTTGAGGGAGTCAAAGTGGACTTATTCTCACCTAGCAACACTTGAGTTTCCCAACTCAATCCTCTCATTTTCTACGTGCACATTTTTTAAACTGCTAAATGATGCATTTTTTTGCAAAAAAAACCCTATACAAAAGTTGCTTTAAAAATTATATTGATCCATTTTTAGAAAGAAAATAACTAATACTTATTTAATCACGCGCTAATGGACCGCTCCATTTTGTATGCAAGAGGATTTGTTCCCAACTGCATCTACCGAATGCAGCCTTATTTTGACAGGTAACCAGGAAGGCAGCAGGCCCGGCCTGCTCCTGGCCCAAAACTCGTTGTCCTAATACCTTCACGGGCCGGACTTGGGCACGGATTTTCGGCCCGTACAAAATGGGCTTTTCTTCTACGCGGCCCGATCAGACCCGGCCCATTCCCAGGTCTGCCGCGGGGAAATCGCCTTCGGGCTTCGGCCCCTTTGCACTTTTGCAGAGGAGCAAAGCTTACAATAGGGCAACCCAAACCAAACCCTGTGCCAACCCCACCTCCAACCCCCCGCGCAGCCGAAGGAATCCTCGACGGCGACGACGATTGCCGCCGCGACGGAGAAGACGGCCGAGGAGATCCGCCGCGAGCTCCAGGAGCTCCAGCGCCAGCACCGCGAGGTCGGTTTCTCTCCCTCTCTCCCTCCCCTGAGAGACCACCCTGTACTCAGCACGATCTCCTCTCCCCGTGCGCAGATCAGCGAGCGCCTCCGAGACCCCCGCGGCCTCCGCCGCGGCGCGCCCGCCGCTGCAGGACCCGGCGGGCCCCGCCCACTTCGCGGATTCCCTAGACCAGTACGGCGTCGCGATTGCGTCTCCTCTTCCCTTTCCCTTTATTTTGTATTCGTGATTTGATTTATTTTCGTGTTCTTGTGTTGCAAGGCTGTGGATTTGGTGGACCAGTCTGCGCCTAAGCGGAGGATTCTATCTGCAGTGGTTAAAGTATCCGCCTAGGCTTTGGTTTTTTATTTTCCTTAGTCAAACTTGTGGTTTGTTTGTCGATAACCCTAATATTCTGTGCATTTGTTTGGTGTCATGAATGGAGGTGGAGGATACTGAAGCTAAGGAGGATGTCAAGAAGGAAGCGGAGGCAGAGGGGCCGGAGGGCGGTTCGGCTGCTGCTGAAGGCGGTGAGAGGAGGGATGGGAGCCAGCGCATGCCGAGGAGGGTGAGTAGGCTGGAACTATAGGGGATTGCGGGTTGAGTTTGCTTAAGTGTATTGTTTTTGTTGCAGGAGCTTGATATGTCATTGCCAGAACCTCTCCCGAGGGAATTTCCCAAGGATGAGGATCAAAGTCTTGTGAAGAGGAACAAGAGGATGCTGGGGAAGCTTCTTGTCGGTACATTAGAGGTAACCGATTCAATAGACATACAAAGGAACAATCCATGGGTCAAGCGATAATAAGATATCAACAGTTTTCAGTGTTTCCTCTCCAACTGATACACACAAAAGAAAATTTTCAGTATTTGTTAACTAGCTTTATCTTGGGTATGGCAACCTGTCAATTAGGTAGGAATTTAATGGAAGTACTAGTGGCAAGCCACCCTCAATCCCCTTCATTGTGAATATTTCAAATCAGTGTAATTGATTTTTCCTTGTGCTTGGTAATCCAGAAATTTCAGCAAGAGGACAAAAAACTGTCCAACACAGAGGCTTATATGCGCAGATCAGAGGTTCAGCGAAAGGTACTAACAATTTCTCTTGGTCTTGGGCCAATCTACATTTAAGCATGATTTAGTGGCTGATGTCAGTTGCATCCACTTTATTCACATGATGACATGTGCTAATTAGAAATTTGATTTTCATACATGGAATTATGAATGTAATATTGCTGTTGGAATTTAACTATTGTGTCCCGTGCCATGACCCATGAATGAACCAAACGATCTCAATAAAACACATACATCAACAGAAAACGTCTTGTCTCCTGATACTACATCAATGAAATTTAGATAAGTAGAATGCATTTTTCAAGCAGTGTTATGTTTTTCTGTTCCTGTGGTCCTGAAAATATCTATTCCCATAGGAACTATCTAGCGCACATTCACTTTATACAACTACCTTTTTGTTGCTATATGCATTGTCCTAGTAGAACTTTGGACAGTACCATGAGTTGAATGGACCGTGTTAAATTCTTTTTATTACCATTCTTTTGCTGGACTTAGGCTAAGTGATCTTCCATTATTGAGATATCGATTTCATTCTCTAGGGTCTCAGTTCTTTCTTTCAAAGTAATCTCGCATATACTATGGTCTAGCCTTGATTTTATTCTCGCTATTAGGTCTGATGTAGCATGGAATATTGAAAAAGATTGCGTGAATGTAGGCTGATCAAAAGGCTCGTGAGGAAAGTGAAAGGTTGCGGCAGCAAGAGCGAGAGCAAGCAATAGAGAAGCGTAAGCGTGATATGGTAAGCTCACATCAGTGTTTATGACTTGCATTTATTTATGATTGGTTCACCTGAGTTAAATTGATGAGTTTATGTTGCAAATGGTTTCCTGATATGCTCTTGAATAGATGCTGCGTGCTCGAGTAGCTGCTAAGGCAGAAGAAAAGAGGTTGGAGCTGTTATACATGCAGTGGGCTGAGCATCACAAAAAGCTGTCCAATTTCTTAAGGTCGCTTTACTTCTTTGCATCATTCTGCACCTTTTTTTATCCATGAATGGGGTCCCTTTTTGTTTCCTTTTGTTGTGCCACTTTGCAATATTTTTATCTGTATTTATCTTACTCTTTTATGAACTGGTCTTATTGTGTGCTGCAGGTTATTTTTATTCCTGGTCCAAAAGTATCCATATTGACAATTAAATTGAGGGAAGATGCGTTTCTGATTGTGCAAATCTTGATGTTCGATGGTCATAGGGGTTTCTATATCCATTTTGCTAAATTATACATTAGTATCTTTTTGAACATTATTGTTGTTTGTCAGGACAACTGCGGAACCACCAATTTACTACATGCCAGCTAAACCAATAATTGATGATCCGGCTATTGCTGAGGAGAACAAGGAAAAGGTATTTTCTGCCCTATATAAGTCAAAGTAAAAACGCTAAGTTTACAAATTTTTGAAGGATGAATTGCGACCCTTTATACACACCTCCATCTACATGCAACTTGGGAGGCAGAACACTACAGATGTACACAATGAGGACAAACTTGTGCCTACTACAAATAATAAATTGTCTATTTTGCTGCTGTAGTATTTGTGTGGCATAGCTAATTTCATCATAGGGCACCATCAGAATGCCAGTTGCCTGCATATATCCAGTCCTGTTGGTTTCTGCTCTGTCATGGTTCAATCAAACATCAAATAAGTACAACGGCTAACTGATCAGCCAGCTATGAAATTGCTGCCCCCCTCCCCCGCATTATGATTATTTTGGTGACATGATATAAAATCTTACCAAAAAATGCATATCGAATCAGTAAGATTTCTGGGCACTTGAAAGTACGTGGTCAGTGCTATGAATTTGTCATATTTTACAAAGCTTTATACTTGAAAGTGCTCTGGTGGTTTGGGTGGGACTGGCTGTATTCGATAACTGTGCATCAATGCTCTTCCTTTGCATGTATGGAGCATGTTGATCTAACCTTTCACGGGATAGTCCTTGGTCAAGTGCAACATATTAAGAGAATGCCACTTCCGCAAGTCAATACTCATCTTTCACATTTTGCCATTTACATCATATGCTTGCTAGTTTCCTGGGCTTCCTTTTTTGTACAATCTGGGGCAACCGATTTTTCTTTGTCCTCTTCATCCATCATGAACTCATATTCAATGTTGCAGGCATTTCAAGAATGGAAATCTGAACGCAGGGCTGAGCTGACTCAGTTTCAAAAGCAAGTCGAAGAACAGTACATGTCTAATGTTGAGAGGCAGTTGGAAAGGATGCAGAATGCGCGGAATGCACGGAGGGGTAATGGTCCTTCAAACATGCAAGAAATGGACAAGGAGCTGGACACGCACAGGGCGGAGCATGGTCCAAAAACTCGACGAGTTCTTGAGGGTGGCAATGACGATGAGGATGATATGGACGATATGGCCGTGGAAGATGAGCTGATGGATGAAGTCCTTGGCATTAACGAGCCAATCAGCGATGAGCAAACCAAGCCGTCTGAAGAAGCTGCTGATGGTGTTCCGGTGTCTGAGGAAGTGCAATAG</dnaseqindica> 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| External Link(s) |
