BGIOSGA009986

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009986| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009986, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA009986

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009986, complete gene.

LocusTag

OSJNBB0017F17.16

Ensembl Transcript ID

BGIOSGA009986-TA

Ensembl Protein ID

BGIOSGA009986-PA

Length

3178

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32136773..32139950

Sequence Coding Region

32139738..32139950,32139496..32139604,32139305..32139369,32139163..32139201,32138940..32139036
,32138747..32138843,32138572..32138638,32138411..32138487,32138168..32138246
,32138018..32138097,32137853..32137922,32137670..32137738,32137515..32137582
,32137372..32137420,32136773..32137159

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32136773..32139950 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32136773..32139950 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCGGCCGCGGTCCTCCCCGTCGTTCTTCGGCGGCCTCCGGGCACGCGAGCTCGGCGGCGGCAGGGTGCCACTGCCACGCGCCTCCGCGGCGCGGCTCCCCTACCTCGCGGACCTCTCCTCCGACCCCGGCGGCCGCGGGAGCGGGGTCATCGCCGTCGAGCACGCCGGCGACCCCGCCATACCTTTCGCCATCTCCTTCTGCAAGGCGGAGCAGATCTCTCACCTTCTGGCGGTAGCTGATGAGGACGGGTATGTTGGCATCTACGACACCCGCCGGCGCCTCCCATCCAGCTCATCGTCATTGGAGAAATCAGCTGAAACGAAGATGTCCGATTGGGTTGCCCACAACAATGCCATCTTTGATGTGTGCTGGATCAAGGACGGTTCCCAATTACTGACTGCATCAGGCGATCAGACTGTGAAAATATGGTCTGTGGAAAACAAGAAATGCCTTGGTGTTCTGTCAGGGCACACCGGGAGTGTGAAGTCGCTGTCATGCCATTCTTCAAACCCAGAGCTCATTGTTACTGGATCAAGGGATGGTTCTTTTGCTCTTTGGGATCTAAGAATCGACCCAAAAACCCCTAATGGTCACCGTGAAGCTTGTCTCATGTCTTCCCTTGTTGTCAAACAAGCACACAGTCCCACACAAAGAAATCGAACAAGGTCTAGAGCAAAGGCTGCTTCGACGAGTATCACATCTGTTCTTTATTTGAAGGATGATATCTCCATTGCTACTTCTGGGGCTGCAGACAACATTGTGAAGATATGGGATACGCGAAATATCAAATTGTCTCTCTCCAACAGAAGCTCTCAAGCAGCAATGCAACCTTTGGAGGGTGTGAAACATGGGATCTCTTGCTTGTCTCAAGACTCATATGGTGCCTATATTGCTGCGTCATGCATGGATAACAGTGCTCTTCATATGGATAAAGGCCCAATTAAGGCTTACACTGGCAGCAAAATTGAATCTTTTTTTGTCAAGTCTGCTATCAGCCCTGATGGAACTCACATTCTTGGTGGTTCGAGTGATGGCAACGTGTACTTATGGCAGGTGGATCAGCCTGAAAGAGGTCCTATAATTTTGGAAGGCCATGAAGGTGAAGCTACTTCAGTTGACTGGTGTGCATCAGAGGTCGGGAAGATCGCAACGTCATCTGATGATTCCAAGGTTCGCGTATGGAATACTGAGAGAAGGGTGTTCCCAAACACAAGTTCCCCAACGGTCATCCGCAAGAGAATAACCGCACCAAACACTGGAAGCCGGTCTGCTAGCCATGAGCTAGCTACTACCTCAAGAGATGTAGGAGTAGCAGCCTGCACCAGTGCAGATGGTGAATTGCCAACTGGTTCACGCTCTCCCCTTCAGCCCAGAGTACTGGAGTTTGGCACACCGGAGTCAGCGAAGAAGAGAGCCTTTAGGTTGTTTCAGGAGGACTCATTGGACATAAGGAAAAGCCCAGAGGCTCAAATGAACAGCCCTTCTTCGGTTCTAAGCCCCCCACATTCACTGAAGAGGAGAACAATTCGGGACTACTTTGCTGGTAGCTCATCTTGA</cdnaseq>

Protein Sequence

<aaseq>MATRPRSSPSFFGGLRARELGGGRVPLPRASAARLPYLADLSSDPGGRGSGVIAVEHAGDPAIPFAISFCKAEQISHLLAVADEDGYVGIYDTRRRLPSSSSSLEKSAETKMSDWVAHNNAIFDVCWIKDGSQLLTASGDQTVKIWSVENKKCLGVLSGHTGSVKSLSCHSSNPELIVTGSRDGSFALWDLRIDPKTPNGHREACLMSSLVVKQAHSPTQRNRTRSRAKAASTSITSVLYLKDDISIATSGAADNIVKIWDTRNIKLSLSNRSSQAAMQPLEGVKHGISCLSQDSYGAYIAASCMDNSALHMDKGPIKAYTGSKIESFFVKSAISPDGTHILGGSSDGNVYLWQVDQPERGPIILEGHEGEATSVDWCASEVGKIATSSDDSKVRVWNTERRVFPNTSSPTVIRKRITAPNTGSRSASHELATTSRDVGVAACTSADGELPTGSRSPLQPRVLEFGTPESAKKRAFRLFQEDSLDIRKSPEAQMNSPSSVLSPPHSLKRRTIRDYFAGSSS</aaseq>

Gene Sequence

<dnaseqindica>1..213#347..455#582..646#750..788#915..1011#1108..1204#1313..1379#1464..1540#1705..1783#1854..1933#2029..2098#2213..2281#2369..2436#2531..2579#2792..3178#ATGGCGACGCGGCCGCGGTCCTCCCCGTCGTTCTTCGGCGGCCTCCGGGCACGCGAGCTCGGCGGCGGCAGGGTGCCACTGCCACGCGCCTCCGCGGCGCGGCTCCCCTACCTCGCGGACCTCTCCTCCGACCCCGGCGGCCGCGGGAGCGGGGTCATCGCCGTCGAGCACGCCGGCGACCCCGCCATACCTTTCGCCATCTCCTTCTGCAAGGTGAGCGAGCCTGGGATCTTTTGTCCCCCCTTCGTTTTCATGCGTTTTTTTTCCCGATTCCGACATCGAAAGGGTTAAGATTTGATGGGAACTGATTGTTCGATGAACCCTCGCATTTTTTTTTTCATTTCAGGCGGAGCAGATCTCTCACCTTCTGGCGGTAGCTGATGAGGACGGGTATGTTGGCATCTACGACACCCGCCGGCGCCTCCCATCCAGCTCATCGTCATTGGAGAAATCAGGTTCGATTGGATCCCCCCTCTTTGATCTAGTTTTCGCACTGTTCGATTCAGTTCGTGGATGTCTGGGGCCACGCACTGGGTGTCATGTTCGATTCGTTCCGGTCTGAAACCGTGACATTCTCGCAGCTGAAACGAAGATGTCCGATTGGGTTGCCCACAACAATGCCATCTTTGATGTGTGCTGGATCAAGGTAACACCTGTTACTCTCAATCATTGAAACATGTTAGAGTTAGTGGTATAAAAGCCAATCCTCACTCACTTGTATCATCTTCTTTTTGGCGTTGTTTATTTAGGACGGTTCCCAATTACTGACTGCATCAGGCGATCAGACTGTAAGTATCGCAATAAGATCATTTTTCAGAAGTAGAATAGAATTGTTTGTTTGTTCTGCATTACAATTCATATTAATGTGATGGTGGACTGCCTTTTGATCATTGGGATTGTTTGTTCTGTATCAGGTGAAAATATGGTCTGTGGAAAACAAGAAATGCCTTGGTGTTCTGTCAGGGCACACCGGGAGTGTGAAGTCGCTGTCATGCCATTCTTCAAACCCAGGTTGGTGTTATGTTGGGAAACAAAAAATCAATTCTTCGTATATTTGTGCCTGTAAAATTTGCCAGGAACTTGTATTCAAGAACTTATTCACTGCAGAGCTCATTGTTACTGGATCAAGGGATGGTTCTTTTGCTCTTTGGGATCTAAGAATCGACCCAAAAACCCCTAATGGTCACCGTGAAGCTTGTCTCATGTATGTTGCCTTGGCTGTTGCAATCTAAATTTCCCCTTTCAACTACAGTGATACAGAAATAACAAATTACTATATTTATAACTCTGTTTGGAATGTGACACATGCTAGGTCTTCCCTTGTTGTCAAACAAGCACACAGTCCCACACAAAGAAATCGAACAAGGTCTAGAGCAAAGGTATTGAATTTGCATGGATTTGCTTTTGCTGGGTATGATCATACATCCTACTGTGGTCAACTTGCTGACGCTGGTAATTTTTAGGCTGCTTCGACGAGTATCACATCTGTTCTTTATTTGAAGGATGATATCTCCATTGCTACTTCTGGGGCTGCAGACAAGTATGTCATTCCCCATTCATTTCATTCTTATAGTTCAAAAGTCATGATGTGTTGTCTGTGGTATTACATTTGAATACGAACATGATCACTTTGAATACAATTTACCTCATTTTTGTGTAACTCTGTCCAAATATTAATGTTCCACTTTCAATAATGTCTGCCAGCATTGTGAAGATATGGGATACGCGAAATATCAAATTGTCTCTCTCCAACAGAAGCTCTCAAGCAGCAATGCAACCTTTGGTAAGCAGCTAACAATCACTACGCAATATGTTTGTAGCCCAATTTCAAGACTTACCGATCATTTGTGCAGGAGGGTGTGAAACATGGGATCTCTTGCTTGTCTCAAGACTCATATGGTGCCTATATTGCTGCGTCATGCATGGATAACAGGTATAACCGCAATCAACCACACTGCCTCAGACTTAATATGCCATTTGTGAAGGCTGCCTTTGACTTTATAAGCCTTTCAGGATCTATTTGTACAGTGCTCTTCATATGGATAAAGGCCCAATTAAGGCTTACACTGGCAGCAAAATTGAATCTTTTTTTGTCAAGGTCAGTGAGTGAACAAGCTGAGTTGATTTCCATTTTTCAAACCGCATGCCTGCTTGTTCTTAGGTAGTTTTATCTGCTATGTTTTATAACACCTGATATGTTGGTCAAATGCAGTCTGCTATCAGCCCTGATGGAACTCACATTCTTGGTGGTTCGAGTGATGGCAACGTGTACTTATGGCAGGTAGTTGTTGGATCATGTTATCATTTCACACACGCATTAGCTGCTCTTTTACTTTCTATTCATGCCACTACTTTTTCACTGACATAGGTGGATCAGCCTGAAAGAGGTCCTATAATTTTGGAAGGCCATGAAGGTGAAGCTACTTCAGTTGACTGGTATGTTCTACATACAATTGTAGTTTTTTTTTTGTGGAAATCTTATCAACCATCCAATGTTCAGATTTCAGTACGATTTTTTCACAATTTTCAGGTGTGCATCAGAGGTCGGGAAGATCGCAACGTCATCTGATGATTCCAAGGTGAGTCTATGTGATTAACCTTGCAAATTTTGTTCATTCAACTTTCATGAATCTTATGAGAATGAGATCCTTTTCTTTTTCTATTACACACCTACATGTTGCAAGCGAATTTAAATGCCTGTTTTGGTATGTAGAAAGGGGAGCTGCTGATATTCAGTATTTTTTTTTAAGAAAACCACTGATAACAACACTTTATGATGTGTATCTATCAGGTTCGCGTATGGAATACTGAGAGAAGGGTGTTCCCAAACACAAGTTCCCCAACGGTCATCCGCAAGAGAATAACCGCACCAAACACTGGAAGCCGGTCTGCTAGCCATGAGCTAGCTACTACCTCAAGAGATGTAGGAGTAGCAGCCTGCACCAGTGCAGATGGTGAATTGCCAACTGGTTCACGCTCTCCCCTTCAGCCCAGAGTACTGGAGTTTGGCACACCGGAGTCAGCGAAGAAGAGAGCCTTTAGGTTGTTTCAGGAGGACTCATTGGACATAAGGAAAAGCCCAGAGGCTCAAATGAACAGCCCTTCTTCGGTTCTAAGCCCCCCACATTCACTGAAGAGGAGAACAATTCGGGACTACTTTGCTGGTAGCTCATCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009986

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009986&oldid=54809"