BGIOSGA009989

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Revision as of 09:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009989| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009989, complete gene.| tag = OsJ_122...")
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Gene Name

BGIOSGA009989

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009989, complete gene.

LocusTag

OsJ_12220

Ensembl Transcript ID

BGIOSGA009989-TA

Ensembl Protein ID

BGIOSGA009989-PA

Length

3631

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32114370..32118000

Sequence Coding Region

32117881..32118000,32116100..32116169,32115544..32115899,32114370..32114429

Genome Context

<gbrowseImage1> name=IndicaChromosome03:32114370..32118000 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:32114370..32118000 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGAGGATATCACGGTCTCCGGGGGTCCGCGAGCTGCTGCTGCTGCGTTTGGGGTTGGCACGCACACATGCAGCGATTGGTGCCGAGCAAAAGCCGAACCTGCTCGAAATTCGGTTGAGTTGCTCTCTGAAAACCCTGCTGCGCTTGCCAGGTACCCTGTGGGCACTGAGTACGATTGGGAAGATGAGGTCACGCCCGCGTCCGACGTCGGTGACGCGGAGGGTGCCGGGTCCGACTTCGACCTCGACTTCGCGTTCGCGCCGCCGGTATCAGCGGCCAAGTTGGTGCCGGCCGACGACATCTTCGCGCACGGCCGCATCGTGCCTGCGTACCCGGTGTTCGACCGCAACTTCCTCGACCTCTCACCTGGCGATGTGGCAGAGCCTGCCTCCACGGCAGCGCCCTCCACCGACACCTACTGCGCGTGGACGCCGCGCTCGGCGCCGAGCTCGCCCAGCCTCGACATCGCAGCGAGATCAACGAGGGGGAATTGCAACTCCGAGACGACGGCGAAGGGTGTTCCTGCTGCATCTACAGTGGTCATGAGCAACCGTTACAACAGAGACTTCACCCTATATATGAATTTAACACCGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MAAEDITVSGGPRAAAAAFGVGTHTCSDWCRAKAEPARNSVELLSENPAALARYPVGTEYDWEDEVTPASDVGDAEGAGSDFDLDFAFAPPVSAAKLVPADDIFAHGRIVPAYPVFDRNFLDLSPGDVAEPASTAAPSTDTYCAWTPRSAPSSPSLDIAARSTRGNCNSETTAKGVPAASTVVMSNRYNRDFTLYMNLTPA</aaseq>

Gene Sequence

<dnaseqindica>1..120#1832..1901#2102..2457#3572..3631#ATGGCGGCCGAGGATATCACGGTCTCCGGGGGTCCGCGAGCTGCTGCTGCTGCGTTTGGGGTTGGCACGCACACATGCAGCGATTGGTGCCGAGCAAAAGCCGAACCTGCTCGAAATTCGGTTGGCAATTGATTGGGGAGTTTGCCTGCTCGGTTTGCTTTGCTTCGCTTTACTATTTGCTTGTGCGAGTGCGACACTGGCCTACCACGAGAGCGTGGCCGGCCGCTGGCCTGCCTATCCCAGGGAAGAGCGGAGCTGCCGTGCGTGGCAGGCAGGCAGGGCCGGCCGTGCTACTTGAGGAGTTGAGGTCATCATGTCCTGCCCGCACCCAGACAGCGGCACTGTGTTGACACAAAACTCTCACAAACTGCGGGCTACTGCTGGCTGGAGTAGGAGAGTACTAATATTCTTCTTGATCAGGTGCGCCAGATAGCCAGTGGTGTTGTATGCTGCGAACAGTCTCTCTGCCTTTCTGTTAGATTAGATTAGTAAGAGATTAGCGGAAGAGATGCTGATAGCGTAGGATTGAGACAATAACCCAAGACCCATGGCAGCGCACGTGTTTCCGCAACGGTATAGCTAAGCCAGCCACAACGGGGTCATGTGCGCAGGCTAGAGATTTCGGTTATCCTGAGCGACCGGTGACACGGATAATTTTGTTTATAATCACAGGGCAATTTGCTATTGCAACTCGGCTACTAATCCTAGTTGGATGGACTAGGTAGCAAGGTGAAAAACAACCCCCCACCAATGCTGCTCTCCAATCAGTTTCTCTGGCAGGTCTCTTTTAATCATCAACATTTCAGAAACATGCATGCCCTACCAATGCAAGCAAAGACCCCAAGCTAGTACCCTATGAATCATAGCCTCAGGGATCTTCTGGCAGCTGCATCTTCTTCCAAAATCAAAAGTTTTCTCAATTAGTCTAGTTTTTCGTCTATATTCACAAAATAAACTAAAAACTAAAATCTAGGAAATTCAGCTATTTTAGATTCTTAGAAGTTGTCTACCAACTATCAACTCCTCGGAATTTTAAGCTATTCAAATAGAGTGTTTCTTTAGAGAGAGATAGGTAATGGAGTTAGGCACCACAATCAGAAGAGCAACCAACTTGGTTGTGTGGAGTAAACATCATATGCCCGGCAAGTTCGGCAAGGACATGGTGGTCTTGCCCCTCATCGAATCCTTTCCGCTTCTGACGTGATGTAGTACATATAACTATCATTACCTAGCGCATCATGCTGATTCCAGGGATTTGGGCTGGATTGGTGGCGGCCCAGATCAGCTTATCTGTTGTAGCTAAAAGTTGAAATTTAAAAAATATTTTATAAATAATTTTTATCATAATTTATTGGTCTTTAAGTCACTAAGGTTGTGTTCGTTCACGCAGATCAACTGACCTTTTAAATAGTGCGGAAACCAGAGCAATTAATTAACTTATGATTAATTAATTATTATAAGCTTAAAATAGATTTATTTGAACTTTAAAAAAACTTTCATATAAAAGGTTTTTAAAAAGGGTTAATTAGATTCATATCACTGCAAATATGTCAACTTGAAAAATATTACTACTATTCAACATATCGGTTATGTGCCACTGGAATATAGGAAATTGGAACCTCCAGTTTTCTATCACCTCCGTCATCTCTTTCCCACTTCATTCGCTTCTCCGCCATGGACGCCGGCGAGCCTTCCACCTCGGACTCGCTGGTCCTTGCCACTGCCACCAACGATCGAGCATCTTGTGTCGGACTCGTAGGTGCACTTCTCCTTTGTTTCCGATCGAGCTTCTTGTGTCTCATCTCATGCCTTGTTTTCTTCCTGCTCGCAGGTTGAGTTGCTCTCTGAAAACCCTGCTGCGCTTGCCAGGTACCCTGTGGGCACTGAGTACGATTGGGAAGGTATACAAAGATTGAGAGATGACGAACAAATGAACTAGATCCTATTAAAACCATGGGTGCCACCAATCCCGCCGCGGAGGGCGCGTGGAGGGGAACACGACGTGATGCCACCCTGCGCCGCAGCCGCCACCGCGATGGCGCAGTCGCCACGCAGCCTCCACACGCTAACCAGCTTCGGCCGCGGCGCCGATGACGTCGAGATGAGGTCACGCCCGCGTCCGACGTCGGTGACGCGGAGGGTGCCGGGTCCGACTTCGACCTCGACTTCGCGTTCGCGCCGCCGGTATCAGCGGCCAAGTTGGTGCCGGCCGACGACATCTTCGCGCACGGCCGCATCGTGCCTGCGTACCCGGTGTTCGACCGCAACTTCCTCGACCTCTCACCTGGCGATGTGGCAGAGCCTGCCTCCACGGCAGCGCCCTCCACCGACACCTACTGCGCGTGGACGCCGCGCTCGGCGCCGAGCTCGCCCAGCCTCGACATCGCAGCGAGATCAACGAGGGGGAATTGCAACTCCGAGACGACGGCGAAGGGTGTTCCTGCTGCATCTACAGTGGTGGAGAGAGAGAGAGAGAGGAGGGGAAGGGGAAAGAGAAGAGAGGGGAGGAAGGTGGGGCCCATGTGCGGTTGGGGTTAACTGGGATTTTTGACGGAAAATGTGATGGAGTGGCATTGTTCTAATTTCTCCCGTTTTGAGTGGCACATAGTCAATATGCTAAATAGTAGTGGCATTTTTTTGAATTGGCATATTTGCAGTGGTATGAATCCAATTAACCATTTTAAAAACACACACCATTTTAACATTTTAACGCTAAAAAAATAGAAAGCTATAGTTTAGAACAAGAGAACACTTTAAGAACAACATAAGATGCAATCTAAATATTATGAATAGCTAATTAAGCGTAAAAGAATGGTTGCGATTTAAGTGGTAGATCTAATCAACCGATAAATCAATATACCAACTATTAGAGGTTGTGTTGAATAATTCTCCGTCATAAGATTTAATGACGGTTCTATAAATAATGTGCTAAGAGCCTGCAGAAGTCTCTATGATGGATGAAAAGTAACCAGGAAGTTTATTGTGAGATGTAAAAAACAATAAAAAACAAAATAGCAAATGTTCCAAGATCAGTTCATAATATATGCACGCTTAATATATTGGTCTGTTTGGGCCGAACACACATACTAAAACATACACACTCAACAGTTTCGTTTTCCTTTTGCTTTATTTTGATCAATACTCGTGCACTTATACTGTTTGCATGGCGATGAACATGCTTGCTTGTAGTATCATCGATCAGTTTCCCTTTAATTTTCTTCTTTACATCTGTTTAATTTGTTCAATTTTATTTTATTACGGCTAATATTTTAAGCGTAATGGAATCATTCTTTGTTCGATGGAGGTATGGTTATTGGTTTATCACACACCAAATCCTTCTAACAAAAAGTCATGACTTGTAATCTTATAGTCTCTAAACTATCTATATGATGTTCTAAATGTATACGGTAAGAAATTATGCAGGGAATGATGTTTTATTGATCATTTAAGTGAGTACCACAAGCAGTATGTTTATTCTACTTGTTTATTTTATTTTATATAAAACCTGTTTACTCTATTAACTAACACTCCCTTCTCTTTTAATTTCACTATTCTCTTCTAATTTCACTAGGTCATGAGCAACCGTTACAACAGAGACTTCACCCTATATATGAATTTAACACCGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009989