BGIOSGA009995

From RiceWiki
Revision as of 09:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009995| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009995, complete gene.| tag = OsI_131...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009995

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009995, complete gene.

LocusTag

OsI_13130

Ensembl Transcript ID

BGIOSGA009995-TA

Ensembl Protein ID

BGIOSGA009995-PA

Length

6506

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31926258..31932763

Sequence Coding Region

31932084..31932763,31930224..31930501,31929617..31929790,31928498..31929514,31926644..31926833
,31926258..31926507

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31926258..31932763 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31926258..31932763 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCACTGCATGAGCCCATCCGCCGCTGCTGCTGTAGCTGCTTCTTCTTCTTCTTCACCTCCCTTTTCCTGCCGTCAACGTCGTCCATATACGTAGCCATGGCTGCTGCCAGTGACATGCCGAACTGCCGAAACGAGTGCGGTGGCGTGCTCATCCCTTACCCGTTTGGGGTCGGCGAAAACTGTTCGCGGCCAGGCTTCGACGTATTCCCAATCACATGCAACAACAGCTTTGTTCCTCCAAGACCATACTGGAGTAATTTGGAGATCATTGACATAAACATAGCCACTGCCGAGATGCGCGTTTACCTGCCTGTGTCTCACAAATGCTTCAGCTCGACCAACCAAACTGCAGACCCAAACTGGGGATGGTCCTTGAACTCCAGCTCCTCGCAGTTTCTGGTCTCGCCGACCAAGAACATTTTCACTGCCCTAGGCTGCTACACTATTGCTATGCTTTCAGGCCGAGACAACGGGACATACAGCACCGGGTGCATCAGCTACTGTGCCAGCGAGAGCGAGGTCAAGGTTGGCGACGGCAAAGGGTGCACCGGCCTCGGCTGCTGCCAAACGTCTATCGCAGGAGGTCTCAGCTACATTGCTTTCTACTTCAACGTCCCCAACAACCCTTCCTGGAACTACAGCCCTTGCAGCTACGCCATGGTAGCCGATAAAAGCTGGGATATCAAGATCAGCAAGGAGGATGTAATCGGCAACATGACGTTTGCCCGAAGGATTGAGAGGGGTGCCCCTTTGGTGCTTGACTGGGCCATAAGAAACAATGGGACGTGCCCTCCAGCTCTGATCAGCGGTGAAAACGGGAAGCAGCGGCAACAAGCTGCTGCCGCATGTGTTAGTCCGCACAGCTATTGTTTGAATGCAACCAACGGACCAGGGTACTTCTGCAACTGCTCAGACGGCTATGCTGGGAATCCCTATGTCTCCAACGGGTGCAAAAATGTTAACGAGTGTGATCCATCCTTCTATAAAGAAAATTATCCTTGCATTGGTGGGAAATGCCTTGACACAGAAGGTGGTTTCAAGTGCAAATGCAATTTTGGACGAAAGAGGGATAGTAAAAATAGCCACATTTGCCAACCCGTGCTGTCCAAACCTGCTATAGTAGTGACAGCAACAACATGTGCCATCTCAATTTTGTCCATCATATTCCTTTTCTTGCACATGGAGCGTGAAAAGAGGAAGCTTCGAGAGTTTTTCAAGAAAAATGATGGCCAACTACTACAAAGCATGGGCATTAAGATTTTCAAAAAGAAGACGATAGAAAAAATCACAAATAATTACAGTACAATTATTGGAAAGGGTGGATTTGGTTTGGTCTACAAGGGAGCTGTTGACAATGACCAGAAAGTTGCTGTTAAGTGCCCGAACCCCATTTCAGTTGACACGGCACGCCAAAATGATTTTGCAAATGAGGTCAGTATCCAATCTCAGATAAGCCACAAGAATGTGGTGAGGCTCTTGGGGTGTTGTTTGGAGACAAATATACCGATACTGGTATATGAATTCATACCACGAGGAAGCCTCTATGATGTGCTTCATGGTAATGGTGATGACAGTAATATGACGGAGCATAAACTATCACTAGATGTACGCTTAGGAATAGCTATTGAATCCGCAGAAGCTTTGGCTTACATGCATTCATCTGCTAGTCAGAAGATCCTTCACGGAGATGTTAAGTCTAGCAACATTCTCTTAGATGAAAATTTCACTCCAAAGGTCTCAGATTTTGGAATATCCAGACTCCTATCTATTGAGAAAGATCACACTAAATTCGTCATAGGGGATGCAAACTACATGGATCCTGTGTATATGAAGACAGGCCTTCTTACTGAAAAGAGTGACGTATACAGCTTTGGTGTTGTACTACTAGAACTTATCACAGGAAAGAAAGCAAGGTACGAAGGCAATGAGAGCCTCCCATTGAACTTCGTTAAGTCTTATATGACAGAGAGTAGGGCCAGGGAGATGTTTGACAAGGAACTCATGTGTACTGAAGAGGTAAATTGTCTTGAGATGATTGGTGATATTGCTGTTCAATGCCTGGAAGAAGATGTGGATAAGAGGCCAGCTATGAAGGAAGTTTCGGAACATCTTCATTTGGCAAGAAAGGAATTCATGCAAAATCAAGGAGCAGCAACCATCAGCGACGAAGCCAAAAAACGGAAAAGGGGCGCCGACGGCAAGCTTTTGTGTGATTTCGCCCTTCATCAGCGATCGCCTATCTCGCCGTTGAGCACGTTGGAGGCCGGACTGGACGCCGCCAGGCACCAGCCCACCATCCGCCGGAGTCCAGAAGACAGGGGTGTTCAGCCGTTCAGCCAAGATGAAGAGGAAACGATAACGATTGATTGCTTCTACAAGCCAGTTGTTGCTAGGGCTGTCTCAGTTGAAATTGAAAATCCTAGCCCAACCAATGTGGAAGTTGCTGATCAGGAAAATTTGCAAGCTGAACAAGAAGTAATTGTAACTACGGCATTTGAGAGGGACCCAGGTAAACGTGTTCAAATCTCTGCAGCCATGTTACATTGTTTATTTGATGTTGGAGACTTGGAACTAGTTGCTACCTAA</cdnaseq>

Protein Sequence

<aaseq>MSLHEPIRRCCCSCFFFFFTSLFLPSTSSIYVAMAAASDMPNCRNECGGVLIPYPFGVGENCSRPGFDVFPITCNNSFVPPRPYWSNLEIIDINIATAEMRVYLPVSHKCFSSTNQTADPNWGWSLNSSSSQFLVSPTKNIFTALGCYTIAMLSGRDNGTYSTGCISYCASESEVKVGDGKGCTGLGCCQTSIAGGLSYIAFYFNVPNNPSWNYSPCSYAMVADKSWDIKISKEDVIGNMTFARRIERGAPLVLDWAIRNNGTCPPALISGENGKQRQQAAAACVSPHSYCLNATNGPGYFCNCSDGYAGNPYVSNGCKNVNECDPSFYKENYPCIGGKCLDTEGGFKCKCNFGRKRDSKNSHICQPVLSKPAIVVTATTCAISILSIIFLFLHMEREKRKLREFFKKNDGQLLQSMGIKIFKKKTIEKITNNYSTIIGKGGFGLVYKGAVDNDQKVAVKCPNPISVDTARQNDFANEVSIQSQISHKNVVRLLGCCLETNIPILVYEFIPRGSLYDVLHGNGDDSNMTEHKLSLDVRLGIAIESAEALAYMHSSASQKILHGDVKSSNILLDENFTPKVSDFGISRLLSIEKDHTKFVIGDANYMDPVYMKTGLLTEKSDVYSFGVVLLELITGKKARYEGNESLPLNFVKSYMTESRAREMFDKELMCTEEVNCLEMIGDIAVQCLEEDVDKRPAMKEVSEHLHLARKEFMQNQGAATISDEAKKRKRGADGKLLCDFALHQRSPISPLSTLEAGLDAARHQPTIRRSPEDRGVQPFSQDEEETITIDCFYKPVVARAVSVEIENPSPTNVEVADQENLQAEQEVIVTTAFERDPGKRVQISAAMLHCLFDVGDLELVAT</aaseq>

Gene Sequence

<dnaseqindica>1..680#2263..2540#2974..3147#3250..4266#5931..6120#6257..6506#ATGTCACTGCATGAGCCCATCCGCCGCTGCTGCTGTAGCTGCTTCTTCTTCTTCTTCACCTCCCTTTTCCTGCCGTCAACGTCGTCCATATACGTAGCCATGGCTGCTGCCAGTGACATGCCGAACTGCCGAAACGAGTGCGGTGGCGTGCTCATCCCTTACCCGTTTGGGGTCGGCGAAAACTGTTCGCGGCCAGGCTTCGACGTATTCCCAATCACATGCAACAACAGCTTTGTTCCTCCAAGACCATACTGGAGTAATTTGGAGATCATTGACATAAACATAGCCACTGCCGAGATGCGCGTTTACCTGCCTGTGTCTCACAAATGCTTCAGCTCGACCAACCAAACTGCAGACCCAAACTGGGGATGGTCCTTGAACTCCAGCTCCTCGCAGTTTCTGGTCTCGCCGACCAAGAACATTTTCACTGCCCTAGGCTGCTACACTATTGCTATGCTTTCAGGCCGAGACAACGGGACATACAGCACCGGGTGCATCAGCTACTGTGCCAGCGAGAGCGAGGTCAAGGTTGGCGACGGCAAAGGGTGCACCGGCCTCGGCTGCTGCCAAACGTCTATCGCAGGAGGTCTCAGCTACATTGCTTTCTACTTCAACGTCCCCAACAACCCTTCCTGGAACTACAGCCCTTGCAGCTACGCCATGGTAGCCGATAAAAGCTGGTACATATTTCCTAGTTAACCATGCTAATATACACAAAATACTACTTCTTCTATATGTTCTAATATATAAACACCTTTATTTTCAGAAAAATAGACTTTTAGAAACTTTAGTTAATATTTGAACTAAAAATATATGAATGTGTACTGTTTAGTGCATATATATGCATGTAGTATTATTAAATCCATATTTCAAAAATTCTCGAGTAAATTGCATTTTGGGTCAAATTTTATTACACAAGTTCTCATTTTGGGCCACTCTTAAACCTATTTATTCACTTTGGAGCGGGTGAATGAATTATTGTTGCGGTTTGAATCACCCCCAAATAATTTACTCAACTAGAAAAATGTCCGTGCATTACAACGGGTGAATGCTATTTTAATATTATTATTTGTTATACGGTTTAGTTAGGGTAAAATTCACTATATGAATTCTCTTGGATATTTTTTTTAGAAAATGATGAGCAGCAATTAGAAGTCCGACTTTTATCTCAACTTAGCATGCGGAGTTTTTTAAAAGAAATTTCTTATACGACTCCTTTTTGTATTTTCAAAAGCAAACGAGCTTAAAATCCAACTCAAACACGGACCTATATTTCCAAAAGCGAACGAACCGACTCAAAAACAGTTGATGTAACAAAATACAGACAAAAACATCTTCAATTTTTGTAATAATAGAGATACATCAATGACATCAAACATACCAGCTCCTGTACACTAATGAACTCACATATATGTGCAGTCCATATATTTGCCAAAAGGGAGATTAGACATACGGTTTAGTTTGAACTACAACAATGATAAATATTAATTTATCCAGTTCAAAGTGAAAATATAGATTTGTGGAAATGAAACTTGGATAATAAAAGGTGACCAAAAGTACAATTTAGTCAAATTTTCGTATGATGTTAATTTCATAATTGTTGGTCATATTATGAAATAAATCAATAGTAAAAATACAATATTAAAAACCATGTAGAAAGTTAATACTGCTTATATTTTACAGCATACGGAATATTTTTCTAACTTAAAATTTAATGATATGATCTATATGAGAAACAAGAATACTTTCTTGCAGGCCATTGAATCGGTCAGAACTTAAAACCAAAATTTAAGTCGGCGGGTATATACCCGAATGAAACAAAGTATAAAAATACATTATAAACTTTTTGGGATTGTTTACTAACTAATTCAAACAAGTCTGAAACTTCATTTGGAACTATTTATGTCTTCTTAAAAAAAAGAACTTCGGATTCATGCAAGGTCGTATGCGCCAATAATTAGCAAACTATGCGATGTGAGCATACTGAAATTTCTAAATTATAGTTGTTCCTTTGCAAGGTGTGGGTATTATTATTCGAACTATATTACACCTGGGTACGTACGCATATATATATACCCAGAAATTGAAATTTCCAAAAGAACAGTTCTAACTCGAGTTGAATTCACGTATTTCAAATCCTAGAGCCTTGTGCCCCTGTGAGCGTCCTATGCAAATCAGTGTATAAACATATATATGTGTCTAATGGTATTATTGATTGGAGGTCCTTCCATGCATTGACGATGATATAAACTATATATATAGGGATATCAAGATCAGCAAGGAGGATGTAATCGGCAACATGACGTTTGCCCGAAGGATTGAGAGGGGTGCCCCTTTGGTGCTTGACTGGGCCATAAGAAACAATGGGACGTGCCCTCCAGCTCTGATCAGCGGTGAAAACGGGAAGCAGCGGCAACAAGCTGCTGCCGCATGTGTTAGTCCGCACAGCTATTGTTTGAATGCAACCAACGGACCAGGGTACTTCTGCAACTGCTCAGACGGCTATGCTGGGAATCCCTATGTCTCCAACGGGTGCAAAAGTCTGTCATTTTTCCTTACTTGTTTCGCAAAAAATACTAATAATGTCTGACATCAACAACAGGCAATTTACATGAAAAATACAAAACAATTTTATAAAGTTTCCATTATTTTATTTTTCCATATCGATCTCCTTAAAACAAACTTGCATGTAACTAAACATATGATGCTTATACAAACCCCGGCCCCTTAATTAGTAGTAGTAGTTATCCATGACACCATTCGATCAGGCAACACGTAGCTAATAAAAAGACCTGCAAAGTGTTTCTAGACTCATACTATAATTGAATATTTTCTTGTTCCAGGAAGCACCCTTAATTTACCACTACTGTACACAGACAGACACACAAAAGTTTTTTTTAAAAAAAATGAAATGAATGCATATATAGTGATTCAGATATCTTGATCACTGAATTTGTTTTCTTTATCATACAGATGTTAACGAGTGTGATCCATCCTTCTATAAAGAAAATTATCCTTGCATTGGTGGGAAATGCCTTGACACAGAAGGTGGTTTCAAGTGCAAATGCAATTTTGGACGAAAGAGGGATAGTAAAAATAGCCACATTTGCCAACCCGTGCTGTCCAAACCTGCTATAGTAGTGACAGGTAATGTTCTTAATTAATACAGTCCTCCTTTCCTACTTATTGATTTATGAAATATAATAACTAACACAAATCAAAGATTAATCCCACGATTTTTTTTCTCAGCAACAACATGTGCCATCTCAATTTTGTCCATCATATTCCTTTTCTTGCACATGGAGCGTGAAAAGAGGAAGCTTCGAGAGTTTTTCAAGAAAAATGATGGCCAACTACTACAAAGCATGGGCATTAAGATTTTCAAAAAGAAGACGATAGAAAAAATCACAAATAATTACAGTACAATTATTGGAAAGGGTGGATTTGGTTTGGTCTACAAGGGAGCTGTTGACAATGACCAGAAAGTTGCTGTTAAGTGCCCGAACCCCATTTCAGTTGACACGGCACGCCAAAATGATTTTGCAAATGAGGTCAGTATCCAATCTCAGATAAGCCACAAGAATGTGGTGAGGCTCTTGGGGTGTTGTTTGGAGACAAATATACCGATACTGGTATATGAATTCATACCACGAGGAAGCCTCTATGATGTGCTTCATGGTAATGGTGATGACAGTAATATGACGGAGCATAAACTATCACTAGATGTACGCTTAGGAATAGCTATTGAATCCGCAGAAGCTTTGGCTTACATGCATTCATCTGCTAGTCAGAAGATCCTTCACGGAGATGTTAAGTCTAGCAACATTCTCTTAGATGAAAATTTCACTCCAAAGGTCTCAGATTTTGGAATATCCAGACTCCTATCTATTGAGAAAGATCACACTAAATTCGTCATAGGGGATGCAAACTACATGGATCCTGTGTATATGAAGACAGGCCTTCTTACTGAAAAGAGTGACGTATACAGCTTTGGTGTTGTACTACTAGAACTTATCACAGGAAAGAAAGCAAGGTACGAAGGCAATGAGAGCCTCCCATTGAACTTCGTTAAGTCTTATATGACAGAGAGTAGGGCCAGGGAGATGTTTGACAAGGAACTCATGTGTACTGAAGAGGTAAATTGTCTTGAGATGATTGGTGATATTGCTGTTCAATGCCTGGAAGAAGATGTGGATAAGAGGCCAGCTATGAAGGAAGTTTCGGAACATCTTCATTTGGCAAGAAAGGAATTCATGCAAAATCAAGGTAAAATCAGTTGCGAAGAAGCTGACGAGATAGCCATAGACTTTCCTCTGTCACATCAGTTATCCCCAGCTTGAAAAGTGATAATCAATTGGCAAACTCCGTAAATTTAATTATCTATATATGCAACTGAATGTGCTTGTGATATTATTAATGTAACTAGCTACTAGTTTTGCTAGCTAGTTTATGTACATCAACTTGTAATTAAGGTATTGTATGTTGTTTTAAGCACCTATCAACCTGTAAAAGGTATTGTACGCCATGAATTATTTTTTTTACAGTATTCAATAGTAGGATTGGATCATATCAGACTTTATAATAAACTACAGAATAAATATACTATTTTATATAAGATTTCTAATGTATTTCAAAAAGAGAAAATCTATTGTATGGCACTGACTTTGACCCAATTCTATGATTTGACGCAGACGTTATCAAATTCTACACTATGCCATTGACTTTTGAATTTCTCCGATTAACCGTCGCCGTTAGATTTCAGAATTTGTCTAAACTTTGGACTTTTTTGGGTCATTTGGATAGAATTATGCAGTACTAACGGAGACTAACCAGACAACAATGTTACATCGCAGAAGTTGAAAAGTTAATGGCATATTCCAGTAAGTGGAATATCGTATTATAACGTACAGTAGTAATCAAAAAACAGATTAGTAGGAAAACGAAAATGACATTGATTTGGAATCTTACACTACTTAAATTTGGAAATAATGGGACTTCTCATTATTTCCTTTCTTTCAGTACTTGCAATTTGCAAACGAACGGTCAACGGTACCAAGTCAATATAGTTAACTAATCACTCTGTCCCAAAAAGAGTTGATACAGTTGCAATCAAGAGACAAAATCGTAGGGAAGAAAAATGACTTATATGTCCCTTATTAAATGATGATTTTTTTTAGAGTAGGAAAGAATTCTTGGGTAAAATCGATAGAAGAAATGCATGTTAACGGTCGGAGGAAAAAGTAGAAGTATAGCATCGTAGTTTGGTGGACAAAATTTAAATTCTTAGCGAAGGCATACGTAACCGTGCCGTAATTAATTAAAGGATATTTTGCGGAAATCCTTCGCCTCGGACGACCGACCGGGGGAGCAAAATTGAGCTCTCCCCCCTAACGCGCACATGTCTCCCGGGCCTCACTGTGTGTCCTACCCCACCTGCCACGTCTCAAAAAAATGTTTCACCTGGTGTACTAACAATATTTTACTATGCATAGATCTAATATTGCAATGAATTAAAATATTTTTTTGCAACAAATAACCCATATATTTTGGAAACCCTCTATTAAGGGATTTCGTTTCATTTTTTGTTCCACCAAAAATGTTTCACCTACTATACTCACAATGTTTCACTATGTATTATCTAATGTTGCAGTGAACGAAACATTCTTTTACAAAAAATCACCCACACAGTGGCGAAGCTAAGGGGGGCCGGGGTGGGCCAACACCCCCCTATCAGATTTGGGCCGACCCCCCCCCCCCCCAAAACCCTCTTCTATCTCCCTGGTAGTGGTAAGCCCAATAGCCCAAGGCAAGTTCTCATCTCAGCCCACCATTAGGAAAAAAACGCCTCGCCTTCTTCGTTAATTCCTCGTCTCGATCACCCCGCTAGCCGTCGCTTCACCTTCGCATTGCGTAATGCCATAGGCGAGCAGGAGCAGCAACCATCAGCGACGAAGCCAAAAAACGGAAAAGGGGCGCCGACGGCAAGCTTTTGTGTGATTTCGCCCTTCATCAGCGATCGCCTATCTCGCCGTTGAGCACGTTGGAGGCCGGACTGGACGCCGCCAGGCACCAGCCCACCATCCGCCGGAGTCCAGAAGACAGGGGTGTTCAGCCGTTCAGGTGAGTTCCTTCTCCAGTTCTCCTTTTCTCCTCCAAATCCCCAATACAACAAAGTTTTGTAGCTTGTATGCTGTAGCCACTAGACTTCAATCAGTTTATGAGTACTCAGTTTTGTTATTTCCCATCTTAATTTCAGCCAAGATGAAGAGGAAACGATAACGATTGATTGCTTCTACAAGCCAGTTGTTGCTAGGGCTGTCTCAGTTGAAATTGAAAATCCTAGCCCAACCAATGTGGAAGTTGCTGATCAGGAAAATTTGCAAGCTGAACAAGAAGTAATTGTAACTACGGCATTTGAGAGGGACCCAGGTAAACGTGTTCAAATCTCTGCAGCCATGTTACATTGTTTATTTGATGTTGGAGACTTGGAACTAGTTGCTACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009995