BGIOSGA010022

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Revision as of 09:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010022| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010022, complete gene.| tag = OS03G06...")
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Gene Name

BGIOSGA010022

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010022, complete gene.

LocusTag

OS03G0689400

Ensembl Transcript ID

BGIOSGA010022-TA

Ensembl Protein ID

BGIOSGA010022-PA

Length

3400

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31557373..31560772

Sequence Coding Region

31559885..31560772,31557577..31559547,31557373..31557519

Genome Context

<gbrowseImage1> name=IndicaChromosome03:31557373..31560772 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:31557373..31560772 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACGACGCCGACGACATCCTCGACGAGTGCCAGGCCGCCGCGGGGGGCGAGGCCGCGACGCCCGTTGCCATGGCGGGCTGCTGCTGCTGCTTCCGCGGCGTCCGCGTCCCTGCCCTCTCCTGCTTCCGCGACCCCGTCCGGGCACGCGAGATCGGGAAGAGGGTCAGGGCGCTCAACCGGAGGCTGGACGGCATCGAGAGGAGGAGCTCCCGCTTCGGCTTCGTCTCCCAGACTAGGATCATCTCCTCGTCTCCCTCCCCTTGCTGCTCTCGGCGCGCAGATTCAGGCGACGGCCGCCGCACCGCGCTGGGCCTCATCCGATCCGACGTCGTCGGGGAGAAGATCGCGGAAGACACGAGGATGCTCGCCGACATCCTTGTCAGTAAGACGACGGACCTGGACGACGCCGGCGGCGGCTGCAATCTCATCCCCACCATTGCCGTCACCGGCGCCGGCGGCATAGGCAAGACCACCCTCGCCAGGATGGTCTTCGGCGACGCCACGGTCCAAGAGAGCTTCGACGCCAGGATCTGGCTGTTCGTCGGCCGGGACGCCGACGAGGTCACGATGCTGCGCAGCGCCATCGCCCATGCCGCCGGGGCGGCCAGCTGCGAGGGCCTCGCCGTCGCCGGGGACAAGGACCTGCTGGAGCGCGCCCTGCAGCGCGCGGTGACGCACAGGAAGGTCCTGCTGGTGATGGATGACGTGTGGAGCGACGCGGCGTGGAACGAGCTGCTCAGGGTCCCGCTTAGCCATGGCGCCCCGGGGAGCCGGATCCTGGTGACCACGAGAAACGATGGCGTTGCTCACAGGATGAAGGTGAGGTACCTCCACCGTGTTGACAAGCTGCGGCGACAGGATGCTTGGTCCTTGCTCAAGAAGCAGATAGTTTTGAACAAGAGTGATGAAGCTGAATTGGATGAGTTGGAGGATATTGGGATGCAAATTGTGGACAGGTGTGATGGTTTACCGCTCGCGATTAAGATGATTGGGGGCCTCTTACTTAGTAAGAGCAGAACAAGAGGTGCCTGGATGGAGGTTTCTAGACATTCTGCATGGTGTAAACATGAAGTGAATGATGAAATTAACAAAGTGGTCTGCTTGAGCTATGGAGAGTTGCCTTCTCATTTGAAGCAATGCTTTGTGTACTGCTCACTTTTCCCACGAGGTGAGGTGATCGAATCAAGAACCATTGTCCGAATGTGGATCGCTGAAGGGTTCGTGCAAGATAGCACGGGTTCAGGATTGCCAGAGGCTGTAGCAGCTCAGTACTACAAAGAGTTAGTCTTAAGGAACCTTTTGGACCCAAGTGATGGGTACTATGATCAACTAGGATGCACCATGCATGATGTTGTCCGGTCTTTTGCCCAACATGTAGCGAAGGACGAGGGATTGTCCATTAACGAGATGCAGAAACAGACCATAGGTGATGCACTTGGTACTCTGAAGTTTCGTCGGCTCTGTATTTCAAACAAGCAAGTCGAGTGGGATGCTTTACAGAGGCAAGTATCACTAAGGACGTTGATACTATTCAGGAGCATCGTTACTAAGCACAAGAATTTCTTGAATAATCTTTCTTGCCTTCGGGTGCTACATCTTGAGGATGCAAATCTGATAGTACTACCAGACTCCATCTGTCACCTTAAGCATTTGAGATACCTAGGTCTCAAAGGCACATACATATCTGCACTCCCTAACCTCATAGGGAATTTGAGGTTTCTACAGCACATTGATCTCTGTGGTTGCATAAATGTGTCTGAACTTCCTGAAAGCATTGTTCGACTGCGGAAGCTAAGATCACTGGACATCAGACACACAATGGTATCTTCAGTTCCTAGGGGTTTCGGAAAGCTAGAAAATTTGGTTGAGATGTTGGGGTTCCCAACCGATTTGGATGACAGTACACATGATTGGTGTAGCTTGGAAGAGCTAGGATCTTTGCCAAATCTCAGTGCACTACATTTGGAGGTTCTGGAAAAGGCAACACTTGGCCAAATGGCAGCAAGATCAAAGCTCAGCAGCAAGCAGAATCTCACACAACTGGAGCTGAGATGCACTAGCAGGATCAGCGCAAACGGCACCGTGCAAGGTGGTATCAGCGAGGAGGATTGCGAGAGAATCGAGAACGTTTTTGAGCATCTCCGCCCTCCACCTTCAATTGACCGTCTTACGATTGCAGGTTACTTTGGACATCGGCTACCGCAGTGGATGGCCACGGCGACCGCCTTTCGGAGCTTGAGGCGGCTGGTGCTAGAAGACTACGCGTGCTGCGACCGGCTGCCCGGTGGCTTGGGCCAACTCCCTTACCTTGACTACCTCTGGATTGAGCATGCACCATCCATTGAGCATGTCAGTCATGATTTCATCCTCCCTCCGGTAGGCATTGCTGTCGATGGCAACGCACCATCGACGACGACAACAACAACTAAGACTGAAGGTGCAGGCATTGCGTTTCCCAAGCTGAAGCGGCTGGGTTTCCAGGGGATGTTGAGATGGGCATCGTGGGACTGGGACGAGCATGTCCAAGCAATGCCTGCTCTGGAGTCGCTCACAGTGGAGAACAGCAAACTGAATCGTCTCCCTCCGGGGCTTGTGTACCACACCAGAGCACTGAAAGCTTTGGTGCTGACGAACGCCGTGAGCCTTGAATCCGTAGAGAACTTGCATTCGCTGGTTGAACTTTACCTGGCTGACAACCCAAAGCTAGAGATGGTTGTAAACTGCTCGAGCTTGACGAAGATTGAGATCCTCAGATGCCCAGAGCTGAAGGCGTTTGACAGGTTGCCTGCAGTCCGGAGCATCGTTTGGGAGGACTTGGATGCTGACACGCTCCCGGGGTACTTACAGGAGGCAAAGGATGCCAGCTCTGAAGAGTGGAGGAGCGTCCGGCATGTGCAACAATTGAAGGTTTTCGGGTTCAAACCACAGAGCGAAACGTCTGAATGTTACTTCCTTTATACCAAAGAGCCATATCACGTCGAAACAAACATCTCCAAAGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MYDADDILDECQAAAGGEAATPVAMAGCCCCFRGVRVPALSCFRDPVRAREIGKRVRALNRRLDGIERRSSRFGFVSQTRIISSSPSPCCSRRADSGDGRRTALGLIRSDVVGEKIAEDTRMLADILVSKTTDLDDAGGGCNLIPTIAVTGAGGIGKTTLARMVFGDATVQESFDARIWLFVGRDADEVTMLRSAIAHAAGAASCEGLAVAGDKDLLERALQRAVTHRKVLLVMDDVWSDAAWNELLRVPLSHGAPGSRILVTTRNDGVAHRMKVRYLHRVDKLRRQDAWSLLKKQIVLNKSDEAELDELEDIGMQIVDRCDGLPLAIKMIGGLLLSKSRTRGAWMEVSRHSAWCKHEVNDEINKVVCLSYGELPSHLKQCFVYCSLFPRGEVIESRTIVRMWIAEGFVQDSTGSGLPEAVAAQYYKELVLRNLLDPSDGYYDQLGCTMHDVVRSFAQHVAKDEGLSINEMQKQTIGDALGTLKFRRLCISNKQVEWDALQRQVSLRTLILFRSIVTKHKNFLNNLSCLRVLHLEDANLIVLPDSICHLKHLRYLGLKGTYISALPNLIGNLRFLQHIDLCGCINVSELPESIVRLRKLRSLDIRHTMVSSVPRGFGKLENLVEMLGFPTDLDDSTHDWCSLEELGSLPNLSALHLEVLEKATLGQMAARSKLSSKQNLTQLELRCTSRISANGTVQGGISEEDCERIENVFEHLRPPPSIDRLTIAGYFGHRLPQWMATATAFRSLRRLVLEDYACCDRLPGGLGQLPYLDYLWIEHAPSIEHVSHDFILPPVGIAVDGNAPSTTTTTTKTEGAGIAFPKLKRLGFQGMLRWASWDWDEHVQAMPALESLTVENSKLNRLPPGLVYHTRALKALVLTNAVSLESVENLHSLVELYLADNPKLEMVVNCSSLTKIEILRCPELKAFDRLPAVRSIVWEDLDADTLPGYLQEAKDASSEEWRSVRHVQQLKVFGFKPQSETSECYFLYTKEPYHVETNISKA</aaseq>

Gene Sequence

<dnaseqindica>1..888#1226..3196#3254..3400#ATGTACGACGCCGACGACATCCTCGACGAGTGCCAGGCCGCCGCGGGGGGCGAGGCCGCGACGCCCGTTGCCATGGCGGGCTGCTGCTGCTGCTTCCGCGGCGTCCGCGTCCCTGCCCTCTCCTGCTTCCGCGACCCCGTCCGGGCACGCGAGATCGGGAAGAGGGTCAGGGCGCTCAACCGGAGGCTGGACGGCATCGAGAGGAGGAGCTCCCGCTTCGGCTTCGTCTCCCAGACTAGGATCATCTCCTCGTCTCCCTCCCCTTGCTGCTCTCGGCGCGCAGATTCAGGCGACGGCCGCCGCACCGCGCTGGGCCTCATCCGATCCGACGTCGTCGGGGAGAAGATCGCGGAAGACACGAGGATGCTCGCCGACATCCTTGTCAGTAAGACGACGGACCTGGACGACGCCGGCGGCGGCTGCAATCTCATCCCCACCATTGCCGTCACCGGCGCCGGCGGCATAGGCAAGACCACCCTCGCCAGGATGGTCTTCGGCGACGCCACGGTCCAAGAGAGCTTCGACGCCAGGATCTGGCTGTTCGTCGGCCGGGACGCCGACGAGGTCACGATGCTGCGCAGCGCCATCGCCCATGCCGCCGGGGCGGCCAGCTGCGAGGGCCTCGCCGTCGCCGGGGACAAGGACCTGCTGGAGCGCGCCCTGCAGCGCGCGGTGACGCACAGGAAGGTCCTGCTGGTGATGGATGACGTGTGGAGCGACGCGGCGTGGAACGAGCTGCTCAGGGTCCCGCTTAGCCATGGCGCCCCGGGGAGCCGGATCCTGGTGACCACGAGAAACGATGGCGTTGCTCACAGGATGAAGGTGAGGTACCTCCACCGTGTTGACAAGCTGCGGCGACAGGATGCTTGGTCCTTGCTCAAGAAGCAGGTCAGTATCACAAACAAATCTGATCAATTGTGCCAATTGCAAGTTTGGGACTGAAATTCGGATTTCACACGATGAGCTTCGATGTTTAAGCTATTGTAGATCTTGAAGAATCCTTAAATAAATGGTTTACAACTATCTACTTTCTAACTGCAATTATGAGAGTTTTTTTTAAGTAAATCACATGATAAAAAAGCATGGTTGTTATTAGGTAAAAATGAATGTTGCAGGTTTTTTTTTTTGTTGTTGTTTACTGTATTTGAGAATAGCTTATATTCAATGGATGTTATTAGGTATACACTTCATTTTTAAGTAAGATAGCTTTTTACTATTCCAACAGATAGTTTTGAACAAGAGTGATGAAGCTGAATTGGATGAGTTGGAGGATATTGGGATGCAAATTGTGGACAGGTGTGATGGTTTACCGCTCGCGATTAAGATGATTGGGGGCCTCTTACTTAGTAAGAGCAGAACAAGAGGTGCCTGGATGGAGGTTTCTAGACATTCTGCATGGTGTAAACATGAAGTGAATGATGAAATTAACAAAGTGGTCTGCTTGAGCTATGGAGAGTTGCCTTCTCATTTGAAGCAATGCTTTGTGTACTGCTCACTTTTCCCACGAGGTGAGGTGATCGAATCAAGAACCATTGTCCGAATGTGGATCGCTGAAGGGTTCGTGCAAGATAGCACGGGTTCAGGATTGCCAGAGGCTGTAGCAGCTCAGTACTACAAAGAGTTAGTCTTAAGGAACCTTTTGGACCCAAGTGATGGGTACTATGATCAACTAGGATGCACCATGCATGATGTTGTCCGGTCTTTTGCCCAACATGTAGCGAAGGACGAGGGATTGTCCATTAACGAGATGCAGAAACAGACCATAGGTGATGCACTTGGTACTCTGAAGTTTCGTCGGCTCTGTATTTCAAACAAGCAAGTCGAGTGGGATGCTTTACAGAGGCAAGTATCACTAAGGACGTTGATACTATTCAGGAGCATCGTTACTAAGCACAAGAATTTCTTGAATAATCTTTCTTGCCTTCGGGTGCTACATCTTGAGGATGCAAATCTGATAGTACTACCAGACTCCATCTGTCACCTTAAGCATTTGAGATACCTAGGTCTCAAAGGCACATACATATCTGCACTCCCTAACCTCATAGGGAATTTGAGGTTTCTACAGCACATTGATCTCTGTGGTTGCATAAATGTGTCTGAACTTCCTGAAAGCATTGTTCGACTGCGGAAGCTAAGATCACTGGACATCAGACACACAATGGTATCTTCAGTTCCTAGGGGTTTCGGAAAGCTAGAAAATTTGGTTGAGATGTTGGGGTTCCCAACCGATTTGGATGACAGTACACATGATTGGTGTAGCTTGGAAGAGCTAGGATCTTTGCCAAATCTCAGTGCACTACATTTGGAGGTTCTGGAAAAGGCAACACTTGGCCAAATGGCAGCAAGATCAAAGCTCAGCAGCAAGCAGAATCTCACACAACTGGAGCTGAGATGCACTAGCAGGATCAGCGCAAACGGCACCGTGCAAGGTGGTATCAGCGAGGAGGATTGCGAGAGAATCGAGAACGTTTTTGAGCATCTCCGCCCTCCACCTTCAATTGACCGTCTTACGATTGCAGGTTACTTTGGACATCGGCTACCGCAGTGGATGGCCACGGCGACCGCCTTTCGGAGCTTGAGGCGGCTGGTGCTAGAAGACTACGCGTGCTGCGACCGGCTGCCCGGTGGCTTGGGCCAACTCCCTTACCTTGACTACCTCTGGATTGAGCATGCACCATCCATTGAGCATGTCAGTCATGATTTCATCCTCCCTCCGGTAGGCATTGCTGTCGATGGCAACGCACCATCGACGACGACAACAACAACTAAGACTGAAGGTGCAGGCATTGCGTTTCCCAAGCTGAAGCGGCTGGGTTTCCAGGGGATGTTGAGATGGGCATCGTGGGACTGGGACGAGCATGTCCAAGCAATGCCTGCTCTGGAGTCGCTCACAGTGGAGAACAGCAAACTGAATCGTCTCCCTCCGGGGCTTGTGTACCACACCAGAGCACTGAAAGCTTTGGTGCTGACGAACGCCGTGAGCCTTGAATCCGTAGAGAACTTGCATTCGCTGGTTGAACTTTACCTGGCTGACAACCCAAAGCTAGAGATGGTTGTAAACTGCTCGAGCTTGACGAAGATTGAGATCCTCAGATGCCCAGAGCTGAAGGCGTTTGACAGGTTGCCTGCAGTCCGGAGCATCGTTTGGGAGGACTTGGATGCTGACACGCTCCCGGGGTACTTACAGGAGGCAAAGGTAAAGAGGTTACACATAAACTGCAACTTGAGCTTGCTCAACCTGATATCCTTGCAGGATGCCAGCTCTGAAGAGTGGAGGAGCGTCCGGCATGTGCAACAATTGAAGGTTTTCGGGTTCAAACCACAGAGCGAAACGTCTGAATGTTACTTCCTTTATACCAAAGAGCCATATCACGTCGAAACAAACATCTCCAAAGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010022