Os12g0242900

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Gene Name

Os12g0242900

Description

DNA polymerase epsilon subunit B family protein

Version

NM_001073015.1 GI:115487991 GeneID:4351872

Length

3293 bp

Definition

Oryza sativa Japonica Group Os12g0242900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7920688..7923980

Sequence Coding Region

7920995..7921147,7921282..7921408,7921490..7921620,7922027..7922068,7922161..7922202
,7922451..7922543,7922625..7922720,7922796..7922900,7923316..7923483
,7923554..7923629,7923722..7923801,7923890..7923979

Expression

GEO Profiles:Os12g0242900

Genome Context

<gbrowseImage1> name=NC_008405:7920688..7923980 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7920688..7923980 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tatttggaagataggataaggaggtctggaagcttgttttctgcatctgggctttgtggagaacctgcagatgctacccttgcttcagaggagagtatgttttcagttggcatggtaatttgtgatggggaaggtcatctaaatgaaaaatctatcttgctacaaggcagtgttgagcactccaggggacagcatgtacgcttagacttgaaggacgtagaccggttttccttgtttcctgggcaggtcgttggcattcaaggccacaatcctagcgggcattgttttgttgtgtcaaagttgaatgattccataccaaactttgttgatgctcaactgcctcgtgctaagaaacaagctgtggacagtgaaggcaaccaaagttctgacgttgtatcaagagtgctatcatcagtcattgcagcaggtccctatacaacgagtgataatctgttgtttgaacctttgcaagaattgatatcttatgccagtcgtaagcagcctcaacttcttatattgatgggaccctttattgattctgatcatcctgaaataaaaaagggagctgttgataagagctttcaggacatatttcttttcgaaattctgagaaagcttcaagacttcacccagtatttggggcacaatgttcgtgtgattcttattccatccgtacgtgatgcccaccatgactttgtttttccccagcctgcatttgacttgaatttaccagaagacatcacgcatcagattacttgtctggctaatccaagcctattcagttgtaacgagatacactttggctgctgcacaatggatatcctgaaacatctgagtggtgaagaaatttctcgcaagccacctggtgaaaagcatggtgacagaattggtagaatttgcacacacatattgaagcaacaaagctattaccctttatatcctcctcctgctggtgtacccttggacttttcactcgctaacggagcactggagatcgcatcagctcctgacgttctcctgcttccttctgaccttgctccatttgtgaaggtgctttccctcgatgaaagtagcgaagaacctaagcgttttatttgcatgaaccctgggagattagcaaagggcattggtggaggcacatttgtagaactcaactacaacgaggacacagacaagacaagcgcctcccttattcgcatctag</cdnaseq>

Protein Sequence

<aaseq>YLEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGE GHLNEKSILLQGSVEHSRGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLN DSIPNFVDAQLPRAKKQAVDSEGNQSSDVVSRVLSSVIAAGPYTTSDNLLFEPLQELI SYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVR VILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILK HLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPPPAGVPLDFSLANGALEIAS APDVLLLPSDLAPFVKVLSLDESSEEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDK TSASLIRI</aaseq>

Gene Sequence

<dnaseqindica>2834..2986#2573..2699#2361..2491#1913..1954#1779..1820#1438..1530#1261..1356#1081..1185#498..665#352..427#180..259#2..91#ttatttggaagataggataaggaggtctggaagcttgttttctgcatctgggctttgtggagaacctgcagatgctacccttgcttcagaggttactacatgccacctgaactttactggttgaactcatcatcatccctgtcctggaagcatatctaattatatatttttatttttaggagagtatgttttcagttggcatggtaatttgtgatggggaaggtcatctaaatgaaaaatctatcttgctacaaggcaggtaaatgttgattctcaaactagttcatgtggaaaacaacatttcatcaccctttcttctttatgctaactaaatgagatttttctttttagtgttgagcactccaggggacagcatgtacgcttagacttgaaggacgtagaccggttttccttgtttcctgggcaggtatctgtattctgttcatatctcatatttattatcaattacattaaattaataccgagttgaatgacaggtcgttggcattcaaggccacaatcctagcgggcattgttttgttgtgtcaaagttgaatgattccataccaaactttgttgatgctcaactgcctcgtgctaagaaacaagctgtggacagtgaaggcaaccaaagttctgacgttgtatcaagagtgctatcatcagttagttcctactaccatttgagaaaacaattggatacatgcccttttatccaatgatcaatgcgtattgataaatttcttagcttattgatatttattcacttttcttttagcttaattaaattgtcaataacacaggaggttttaataatactaggtcactgtacatcttattgttaaagttagtaaataatttttgcttcctatatttgttgctatatagttcgttatgcttcatttacatattctaatttcaggtagccactaaaagtgtagagttgaataataaaaccatggatcttaagaagtaacaaaaaaaatgcaacaagtaacaaccatacttgattcactgtgaaatgataatggaacatcaaagctactgttctcatgtttgaaggtatcatatgtcttataggtcattgcagcaggtccctatacaacgagtgataatctgttgtttgaacctttgcaagaattgatatcttatgccagtcgtaagcagcctcaacttcttatattggtgaggcatttgaatcttgttgaagcaatttaatatgtttggcactccgtaccaattgatgtgtcttggatgcagatgggaccctttattgattctgatcatcctgaaataaaaaagggagctgttgataagagctttcaggacatatttcttttcgaaattctgagaaaggtaggcaccacagaagatttcatgctggcaggtaatgaaatacacaactgagtaacatttatatttgatgtctttgtccagcttcaagacttcacccagtatttggggcacaatgttcgtgtgattcttattccatccgtacgtgatgcccaccatgactttgtttttccccaggtgtgtaattcctcattcagagccaggcttgtcttgtctaatttgcaattatgaagaggttgccatttttcattatctattaggcacatgacttttattcatctacgacatttttggcctaaaaatatcctatatcttggcattctgcagcttatctctctgatagcttattatgattattattatttaagccttcttttgatgctgctttcacatgcttgacataactgtatttttgctgtctgcagcctgcatttgacttgaatttaccagaagacatcacgcatcaggtagtaatacgatctttgtgataatatctgttttcttgcgaaatatttgataataattcccttgttctgaaatggtttcacaaattatgcagattacttgtctggctaatccaagcctattcagttgtaacgaggtactgtaccgtatccaaatgaaagaaatgattgtgtggtgatatatactttaattattacagaggcaaagtacatgtattctaatcgtgaaaatgtctacaaatggcatccctaggttattgaatcatttgtgctattctgctaagaaatcaggttattccttgttttccattaaaaattcacataatcctttattcacattttagttcaaaaatgtcactgacacataatgatcatggcaatgaatagtaaataagggaaccacaattttattgtgtttgcctactaagatatttatttacctaattttggaacttgtctatgtgctgaatacatatcatccatattaaggacgaacttattctatataagaagttctcctaagctgtattacttgtgttccagatacactttggctgctgcacaatggatatcctgaaacatctgagtggtgaagaaatttctcgcaagccacctggtgaaaagcatggtgacagaattggtagaatttgcacacacatattgaagcaacaaaggtaattacatatatcttgataatggtgctactcagggcagagtttttattaatggactctgatatagtactcttcctatagctattaccctttatatcctcctcctgctggtgtacccttggacttttcactcgctaacggagcactggagatcgcatcagctcctgacgttctcctgcttccttctgaccttgctccatttgtgaaggtaattgtgacaagaaatgttattggaattttaaattgatatgcataaatttgagttgtgatcatcagggagcttaaacatgtcacttattgtttctttttcctttccaaatgaaatgatttacacttcaacaggtgctttccctcgatgaaagtagcgaagaacctaagcgttttatttgcatgaaccctgggagattagcaaagggcattggtggaggcacatttgtagaactcaactacaacgaggacacagacaagacaagcgcctcccttattcgcatctagttttccgaatgccgtaatttataggctgatgagaattaggaaagcttcctttcttatgtaacacaccccttactgctcaacagtaaaggatcgaaattcttcatggttctttatgtggtaagctttcctaattggtcaacgaaaatcagttcatttgcgttatccttgctgtgattattcttggagtagtgtacggtactagcattttctgctaacaaggtgattttactgtgaactaacaactgttctgatcttgttccacatgaccacatcccattgtgaataagaatcaggaagctacttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0242900, RefSeq:Os12g0242900