BGIOSGA010054

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Revision as of 09:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA010054| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA010054, complete gene.| tag = OsI_130...")
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Gene Name

BGIOSGA010054

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010054, complete gene.

LocusTag

OsI_13019

Ensembl Transcript ID

BGIOSGA010054-TA

Ensembl Protein ID

BGIOSGA010054-PA

Length

5694

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30950261..30955954

Sequence Coding Region

30955798..30955954,30955198..30955281,30953615..30953853,30953464..30953527,30952724..30952810
,30950970..30951014,30950538..30950649,30950261..30950414

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30950261..30955954 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30950261..30955954 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCGCGGTGGTTGGGGTGGCGAGCAGAGCACGCCGGAGTTCTGGCCCGAGGGGAGTGGCATTCTGCCGATGGACGAACGGCCTCCTCCACCCGCGCTTCGTCTTCCCCGAGGCCGCCGCGGTGGCGGGCTCTGGGGCTGGCTCCGCTCAAGACTGCATTGCATTGAGAAACGCCATTATGCCAATGAAAATTTCTCCATATGCTTCCTATACTGGTTCACATAGTGTTCAACACTTTGCCGCTCCACACCCCACTGCAAATGTCAGCACAAACAACAGCCTTTTGGATCCCTTTTCAACTGGGAATGGTACTGTGCTATCTGTGCAAAAACATGAGCCTGAATGTTCAAGTGTTATATCATCAATGACAAGGACAGAATATGGATTTGAAAGTGATGGTTGCAATTTGTTTAGCCATTTTGATGTTGTTCAAGATTTTTCTGACCATTACTATGCAAAGAATTCACCAGGGAAGACCTCCAAAGATTGGGTGAAGACAATCCAAAATGAATGGAGGCTTCTACAGAAAGATCTACCTGAATCTATCTATGTTAGAGTTTATGAGGATAGGATTGATCTGCTGAGGGCTGCCATTGTTGGGCCAGCTGAAACTCCATATCATGATGAGCTGTACCATGAGAGAGGCCACTTCTATGACTTCACTTCGTTAGTGCGAGAATTAGATGTCGCTGGTGAAATCTATGAAAGGAAGACTTATCCATTTGAGTTCTCTACTGTTGAGATGCCTTATGATTCGTATAACGGAACAAATGTCAGATTGAGGTTCTTAACTACCGAAGCGAAGAAAAGGCTGGATCAAGAAAAGGGGGTACTACGAGCCCTCTGCCCCACGCATCTAACCAGCTCGCGTGGTTCACCGGTTCCACCGACGTCACCCTTAGATAGAGTTATTCTGTCGATACAGAGATGCGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAVVGVASRARRSSGPRGVAFCRWTNGLLHPRFVFPEAAAVAGSGAGSAQDCIALRNAIMPMKISPYASYTGSHSVQHFAAPHPTANVSTNNSLLDPFSTGNGTVLSVQKHEPECSSVISSMTRTEYGFESDGCNLFSHFDVVQDFSDHYYAKNSPGKTSKDWVKTIQNEWRLLQKDLPESIYVRVYEDRIDLLRAAIVGPAETPYHDELYHERGHFYDFTSLVRELDVAGEIYERKTYPFEFSTVEMPYDSYNGTNVRLRFLTTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPTSPLDRVILSIQRCA</aaseq>

Gene Sequence

<dnaseqindica>1..157#674..757#2102..2340#2428..2491#3145..3231#4941..4985#5306..5417#5541..5694#ATGGCGGCCGCGGTGGTTGGGGTGGCGAGCAGAGCACGCCGGAGTTCTGGCCCGAGGGGAGTGGCATTCTGCCGATGGACGAACGGCCTCCTCCACCCGCGCTTCGTCTTCCCCGAGGCCGCCGCGGTGGCGGGCTCTGGGGCTGGCTCCGCTCAAGGTACAATCCGCCGCGAACTCCCTAGGTTTTCTTTTTGGTGGCTCGGTTGCGGGATCTACCGCGCGTTTGGGTGCTCGGAGATTCCGATGGGTGCGCGCGCGCGCTTGCTTCGCGTTCCGATCGATCGTTCATCAGATCAATGTGATGTGATGCCTGTCGCATGATTCGAGTTCTAGATAGTAGATTGATGCATTAATTCATTTGTGTACTTCTCTGAAATTTGGGGATGTGAGTAGTAGGTTATCTGAACTTCACGGGATGCTATCGGACCAAAGTAATTAGAGAATTTCCCTAGGGTGTTTGGGTGCTGGATTGGAGATGTTTAGAGTGGAGACTGGACAATCTACGTTACAGGAGTTCTTCTGGTGCTACGCATATTTTGTATCCACTTGTTTAAGCTTATGCTTTAGGAAATGTGCTGCTCTGCCCCGGCACACACGTTGCATTAGGAAATGTGCTACTCTATAGTGAACTGCGGAATTAATTCCTCACCATGTGTTTTCTTTGGGGATACAGACTGCATTGCATTGAGAAACGCCATTATGCCAATGAAAATTTCTCCATATGCTTCCTATACTGGTTCACATAGTGTTCAACACTGTAAGTTCCTGACAGCTGGAACTTACAGCTAGGATGCTGTAAGTTCCTCACTTCCTGTGCCCATGTTCTGAACTGTTCCATATGCATTTCCCACTTGATGTTATTTCAAATTGCTGTGTTCCACTTTTGGACCATATATCTGGCAGTAATTCAAACAGATATAGTTTTGCCAGGAGTTCTAGCTAACGTCTCTTCCCGGTCCTTGAGATCACATCTGCTTGGTTTTGCATGTCCTATTGTTTGAAACTTGCTGCCTATTAGAACCTCCTTAGTTGTCTCAATACTTTTACTTTTATTACTGCTACATTAATTATCTTGTTGCTGAGCCCTGCAACTAAAACCCTCCCCCTCCCCCCCTCTCCACTGCAGAGCACAGCGCGACCACCTCAGACAAACCTGAGGTTTTCTTCTTCTCCTTTTTGATCGATGCAGCCGTTGTTCTTGCGGGGAAAGGGTTCTTTTTTTCCTTTTTTATTTTGTGGAGGCGCGGCCGTGGGCGATGGGTGGTGGCTGATGATCAGGGGACATAATGGATTGACATTATTGGATAATTATCAGATAATTGGATAATTGTGGACAAAATGTCAACATTATTGGATAATTGTGGCTGCTGTACATTATTGCTATATCAGATGCTTTGAGGTTAACAAAGTATACCAAAATGTGATATGTGTAGTAAACTTAATCTCAACAGATTGAGAGTGCTACTAGTGTGATTGGATATATTCACTGGAGAGTGAACTTGTGAATAGTCTGGTATTATGAATCCATGAGTCTTGGTGATCAATATTGTTTTGAAGTTTGTTAAACTGTATAATGAAAAAAAACTTAATATTTCATTAGCCTGTATACCCAGCCACGAAATCCGCATCTCCCTCTGAAGCATGGAATTCTCCTTATTTTGTTTCAGAAAGATAAAATCAAGTGTTTTGCTCTTCTGCCTGGAGCTTTCTAATAAAAGAATATTTTCATGCAGGCAAAGCCATTAATCCTCTTTGTAAAGGTATCTTTTCATGCAACTTTTTCCTCCTTGTTTGTTTTTGTAATTCTTATGCTTCATGTAGCTGAACCTGTTCTTTTAAAAAATTAAAATGAACAAAAAAAAAAGCCCCCCCCCCTCCCCGTTTACCCCCAAAGGGGATATTTGTTACTTTAACAGAACTACACATTATCTAATGTTCATCACTCTTTGCTTTGCTGTCAGTCGGTAGTATTGATGCAAGTAAACCTCTTTTTTGCAGTTAAATGAGCTTCAGTATCCTATTCTGTATCTCTGTCTTTAAGATTGGTGTGCCTTTTTTTGTAACATCTTGGTTTGAAACTAGTTACTCTACTGGCTTTCAGTTGCCGCTCCACACCCCACTGCAAATGTCAGCACAAACAACAGCCTTTTGGATCCCTTTTCAACTGGGAATGGTACTGTGCTATCTGTGCAAAAACATGAGCCTGAATGTTCAAGTGTTATATCATCAATGACAAGGACAGAATATGGATTTGAAAGTGATGGTTGCAATTTGTTTAGCCATTTTGATGTTGTTCAAGATTTTTCTGACCATTACTATGCAAAGAATTCACCAGGGAAGGTAAGCTGTGCGTTTTATGAATTCTATTTCTATCAATAGATCCAACTGTGAATTAATTTCCTGTCTTTATCTGTGGCCACTGATCAGACCTCCAAAGATTGGGTGAAGACAATCCAAAATGAATGGAGGCTTCTACAGAAAGATCTACCTGGTCAGTACATGCTTTTATATGGCAAATCATTGTATTCAATTTTATCAAACCGTCAGTGCCTAGATGGTGAACACATATAATGGTCCTTTCTTATACTGACCTCTGTTTTATGCCAATTATATCTGATCCGTGTGACATGCTAACAGACTATGTTTGAAATCTTTCTTGAGTTAAAGGTAGTCACATGCTCAGTTTGGGTTTGAATAGGATATATTCATTGGTTATACCAATTTGTTTGTGGTTTGGAGTTTTGTTACAACTGTTGCTGAATCCCGAACTAGCTAATGATATTGTCTATGCTTGATGTATAAAATACTTTATTCGTGCTATATCTGATTTATCTGTTAGTTTTTGTTAATGTGTCACATATCTTTTAGTTATGGTCTGCATTTATCGTCCCTTTTCCATGCAATCTTGTCATAGAAGCATAACAGTCTTCAGAACTTAATCTTGCTAAGTTTGGGTAATGGGACAAATGGAAAAGAATGTACATATCTCAAATCATGTTGCTGAAGGAAGCTAATGTATCACAAGTATCATTACATACAGTTTACATTTGCGCCTTAAGTTTTTCGTTTAGAGCAACTGTGACTGAAATAGCTGATGTCTTCAATACTAGAAACTTGCATCTCAGTCTGGTTTCAATCATGCAGAATCTATCTATGTTAGAGTTTATGAGGATAGGATTGATCTGCTGAGGGCTGCCATTGTTGGGCCAGCTGAAACTCCATATCATGATGGTCTGTTCTTCTTTGATGTTTGCTTTCCTTCTGAATACCCACAATCCCACCGGTATGAAACCACTTCACACACGCTTTCCACCATTATTTTCATGTTACTACCACCACTGGTATAACCTCTTTAAAATAATATCCAACGTGTACAGAAACTTCATTACCATATGCATTTCCCACTTGATGTAATTTCAAATTGCTTTGTTCTACTTTTGGGCCATATATCTGGCAGTAATTCAAACAAATATAGTTTTGCCAGGAGTTCTAGCTAACGTTTCTTCCCGGTCCTTGAGATCACATCCGCTTGGTTTTGCATGTCCTATTGAAACTTGCTGCCTATTAGAACCTCCTTAGTTGTCTCAATACTTTTACTTTTATTACTGCCATATTAATTATCTTGTTGCTGAGTCCTGTTTTGATGATTATGCACAAAGTATTCAGTTGTTCTGGTACCTAAATGAGTAGTTTGCTTGCTGGCGTATTACATGACTTAAACAATAATACTTCTCTTTTTGTAACTGAAATTAAGTCAATAAAAAGGGAAAAAAACTTGCTATTACATAAAAATCAAGAAATTAAGTCAAAAAATGGAGAATAAAAGAATGGTACCTTCAGTGTGGCCAAATTGAAAGGTTGGATGTGATAGTATGCCAAGATTGTTAGGTTTACATAGAATCTTTCGTGAGAACCATTGCCATTGTAAGATCATCCACAAAGAATACCATCAATGCATATGTATTATCATCCTGTGTACAAAAATAGCAGGCAGCAAATTAACCAATAAAAAACTGCTCATAGCATAAACAACTAAACCTAAATAGGACCACATATATCATTCATGTTGAACTAATAATGAGCAGCAAACCAGAACAGGGATCAGTGGCTAGATCAAATAGGTACACTTGCATATAGTATATAGAAATCATAGTACAACACAAAGGGAAAAATCGTTCATTGCTTTAAGTAGAACTGCATACCAAATTGGGTTTAGCCGAGTCGTCGCCATACGCTGGTACAGTCATGGCTTGTTATTGTTGTCCTAGTCATGGCCGAGCCGCCGCTCTCAATCTATCTTATCGTCCCTGGCGTCCTAGCCATCGCTCGGATCTGGCACTAAATGGAGTGGAGAGCGATTAGAAGAGGGCGAGAGCGAGGGAGGCGATGGTGGGGTGGGGATGGAAGAGGAGAAGATGGTGGCGGCGACTCGTGTCCCTCGCTTCCCTGTGGCCAGATCCACCGGTGACTTATGCGATGGCCTCTCTCGGAGAGAGTGGCGGCGGCGCGGTGAAGATGGCTGGAGGAGGGTGAGGAGGCACGCGGGTGAGGATGGGTGGCGGCGCTAGTTGTGACGACGCGGGTGAGAGGAGGAGGGCGGCTAGGGTTTTGGTGCGGTGTGGTGACATCTGCGCCGTTCATTCCCAATCTGACGAGCGCACGGCTTAGGCATCCACAAATGTGATTTGTTTGTAGACAAACAAATGTGAACGGACAGGTTCTTTGTTCCGCTGAAAATTCATTAGAGTATTTACCCAGCCAATGTTGTTTCAAATTCTCATAACCATGATAAAGTATAGGATTTAATTGCTTGAGAAACTGGAAAAAGTACTCGCATGAGCACTTCTTTTCTTCTACCATTATCAGCAGCATTGATCTTCAATAGTTCAGGTACTTCCAAGTTCTAACATTATTATTACCTGTGATCTTTTATATTGCAGAGCTGTACCATGAGAGAGGCCACTTCTATGACTTCACTTCGTTAGGTAGCTCTCTCAAGTGATTTTGAAGAGTCAAGGAAAAAGAGCTCTCTATTAAGGTAGTCTTGATCTTTTTGCATCTCTTCTTGTATGTCATTGTTCCCTTCAGGTTCTTTGCACTCTTCATATCTTGATAAATTTTGATGCTTTACATTGTTGATTGACCCCAAGAGCACTATCTTTCAAGTTTAGCAGGAAAATTGAACCCTCTGAAAACTTTCCTATCTACAAATAATGGAATATGACTGAGAGCTGGCTGTTCAGTTGTAAACCAGTAAAGCTGTTCAGTATCTTAAGTATTTTTCTCCTTTTTTTTGTCTGTGTAGTGCGAGAATTAGATGTCGCTGGTGAAATCTATGAAAGGAAGACTTATCCATTTGAGTTCTCTACTGTTGAGATGCCTTATGATTCGTATAACGGAACAAATGTCAGATTGAGGTAAGAAGGCCAAGATGCTTCCGTTATGCATTGCACAGGTCATAACAAGAACAGCTTGCATGACTTGTAGCATCAACAACTTTAATAACACTATCTTAAAGATCAGCCCCCCTTGGATTTTAGGTTCTTAACTACCGAAGCGAAGAAAAGGCTGGATCAAGAAAAGGGGGTACTACGAGCCCTCTGCCCCACGCATCTAACCAGCTCGCGTGGTTCACCGGTTCCACCGACGTCACCCTTAGATAGAGTTATTCTGTCGATACAGAGATGCGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010054