Os12g0244100

From RiceWiki
Revision as of 10:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0244100| Description = Similar to Heat shock 70 protein| Version = NM_001073018.1 GI:115487997 GeneID:4351875| Length = 5656 bp| Definitio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0244100

Description

Similar to Heat shock 70 protein

Version

NM_001073018.1 GI:115487997 GeneID:4351875

Length

5656 bp

Definition

Oryza sativa Japonica Group Os12g0244100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:7985246..7990901

Sequence Coding Region

7985294..7985824,7986671..7986923,7987562..7987641,7988460..7988602,7988692..7988790
,7988896..7989085,7989331..7989729,7990186..7990587

Expression

GEO Profiles:Os12g0244100

Genome Context

<gbrowseImage1> name=NC_008405:7985246..7990901 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:7985246..7990901 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccttcacctcccagctcggcgccatggcgtgcggcgccgccccctccacctcgcccctcgcggcccggaggagcgggcagctgttcgtggggcggaagcccgcggcggcgtcggtgcagatgcgggtgccgcgggcggggcgggcgcggggggtggcgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcggtggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacgacgccctccgtggtggcgtacaccaagggcggggagcggctggtcgggcagatcgccaagcggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgcaagatggccgaggtcgacgacgaggccaagcaggtctcctaccacgtcgtccgcgacgacaacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgccgccgaggagatttccgcgcaggtcttgaggaagttggtggacgatgcatctaagtttttgaatgacaaaattaccaaagcagtggttactgttcctgcatacttcaatgactcacagaggacagcaacaaaagatgctggacgtattgcaggattggaagttctccgcattataaatgagccgactgctgcatcccttgcttatggttttgagaagaaaaacaacgaaacgattcttgtgtttgacttgggaggcggtacctttgatgtctctgtattggaggttggagatggtgtgtttgaggtgctttccacatctggtgacacacaccttggtggcgatgacttcgataagaaagttgtggattggcttgctagcaactttaagaaagatgaaggcattgatcttctgaaagacaaacaagccctgcagcgactcactgaggcagcagagaaagcgaagatggaactgtctacgctgtctcagacaaacattagcttgcctttcataactgctactgctgatgggcctaaacacatcgagacaactctctccagagccaaatttgaggagctatgttcggacctcattgataggcttaaaactcctgtcactaatgccttgagagatgccaaactgtctgttgataacctggacgaagtgattcttgttggtggatccactcgtatcccttccgtgcaagagcttgtgaagaagatcactggcaaggatcccaatgtcacagtcaaccctgatgaggttgtttctcttggggcagctgtacagggtggagttttggccggagatgtgaaagatgtcgttcttcttgatgttactccattgtctcttggtctggagacgttgggtggagtgatgaccaagattattcccagaaacacaacactgcccacctcaaaatcagaggtattctccacagctgcagatggacagacaagtgttgagataaatgttcttcagggagagagagagtttgtccgggacaacaagtctcttggaagcttccgcttggatggaatccctcctgcaccacgtggtgttccacaaattgaagtcaagtttgatattgatgccaatggtattctctctgttgctgctattgataagggtactgggaagaaacaggatatcaccatcaccggcgctagtacactgccaaaggatgaggttgagagaatggtggaagaggctgacaagtttgctcaggaggacaaagagaaaagagatgccattgataccaaaaaccaggcagactctgtggtctaccagactgagaagcaactgaaggagctaggtgacaaggtacctgcacctgtgaaagagaaggtggatgcaaagctcaacgagctcaaagaggccattgcgggtggatcaacacagagcatgaaggatgccatggctgctttaaacgaggaagttatgcagatcggccaggccatgtacaaccagcagcctaatgctggtgctgctggacctactcctggtgccgatgctggaccgacaagctcaggcggtaagggaccgaatgatggagatgttattgatgcggatttcactgacagcaattga</cdnaseq>

Protein Sequence

<aaseq>MASFTSQLGAMACGAAPSTSPLAARRSGQLFVGRKPAAASVQMR VPRAGRARGVAMRVACEKVVGIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYT KGGERLVGQIAKRQAVVNPENTFFSVKRFIGRKMAEVDDEAKQVSYHVVRDDNGNVKL DCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGR IAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTS GDTHLGGDDFDKKVVDWLASNFKKDEGIDLLKDKQALQRLTEAAEKAKMELSTLSQTN ISLPFITATADGPKHIETTLSRAKFEELCSDLIDRLKTPVTNALRDAKLSVDNLDEVI LVGGSTRIPSVQELVKKITGKDPNVTVNPDEVVSLGAAVQGGVLAGDVKDVVLLDVTP LSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSL GSFRLDGIPPAPRGVPQIEVKFDIDANGILSVAAIDKGTGKKQDITITGASTLPKDEV ERMVEEADKFAQEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAPVKEKVDAKLN ELKEAIAGGSTQSMKDAMAALNEEVMQIGQAMYNQQPNAGAAGPTPGADAGPTSSGGK GPNDGDVIDADFTDSN</aaseq>

Gene Sequence

<dnaseqindica>49..579#1426..1678#2317..2396#3215..3357#3447..3545#3651..3840#4086..4484#4941..5342#ccgcctgaatccttctccctcgccgggttagggtttcctcgcctcgccatggcctccttcacctcccagctcggcgccatggcgtgcggcgccgccccctccacctcgcccctcgcggcccggaggagcgggcagctgttcgtggggcggaagcccgcggcggcgtcggtgcagatgcgggtgccgcgggcggggcgggcgcggggggtggcgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcggtggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacgacgccctccgtggtggcgtacaccaagggcggggagcggctggtcgggcagatcgccaagcggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgcaagatggccgaggtcgacgacgaggccaagcaggtctcctaccacgtcgtccgcgacgacaacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgccgccgaggagatttccgcgcaggtgatttcttctgcttctttattttttttagctctcaacttcgatttctatgtcagtgagactttttgtttgttggccatacattcaatctgtcactcattttgtacccaaaggtgtgtttcagtttcactcaattgggggcacttggaatgattaaacaatgaatttgaatataatgattaatcatataaatgtgattgtttaggcgaattcaaaatacgaaattggacttggaggtatcgcctcggaatagatgttgctatttttagttatatgggcgagctcaagttataatggtttatatgttttcctgtattttttgttagttttgtacaaaaaccaatcctacctggattttttttttttgggatggagggagtattgatttacctgttagtatgttggtagcttggaaacctaagttctataattatgctcaaatgtgtgtaatgcctaatcagcttaagatggtcatgtattcatcttgaacttctatcggcagtgaggcagtctgagtgatgggaaggaatcaactagtaaatctttttcttatagtgcaccattctaaacttgaaatggttttgtgttaccatacttagcacttatccactgttgattaagataaagttttctggcatcaccaattgctaatttgagtcaggtttaacatatcctcactcacctatgcatgtgtagggacataataaatacatggtttgtcacagagacaggacctaagttaaacaacacctgaatgctcagggtccataatggcataatgtagcttacattttatttacatagtaaatggattactaaatttcacttttcgggtcaatgcaacaggtcttgaggaagttggtggacgatgcatctaagtttttgaatgacaaaattaccaaagcagtggttactgttcctgcatacttcaatgactcacagaggacagcaacaaaagatgctggacgtattgcaggattggaagttctccgcattataaatgagccgactgctgcatcccttgcttatggttttgagaagaaaaacaacgaaacgattcttgtgtttgacttgggaggcggtacctttgatgtctctggtatgttatgtgctagaacaccaaactgtttacttttcttgcactattactgtagcatagggatctcgtggacctgaatcttatcatacttctatgacagaccttttttcctagatggatcgtactggaaaatagatgatgaattgatttgatcaaatggaatgtgaaatgctgttgctgtttcatatctgtgaaatcttttaccaaggttcacaactgtttagccagaaacatgagttctttatatggttcctccagaacttaatatattgtcttttatgaaggttcagaactatttagccacaagcatgagttctactttatatggtccctcctgaattaaacatatcgttactaaatatttgagttgagtagctccttgttctatcatcatacatatagaggctgcctcgagtttttttaaatagatcaatatttagttaaaagggactttggaagagagatactcaaagcagatttttctgcgaaaatgactttggaagaatgaaacttacttcaggagtccctcaattgtgaagtatatggttcatgttgtgatgaaaaaaataggatgagtcctcaaacatgccatgatgtaattgaattgtgatctctactaaagaaacattatcctgcagtattggaggttggagatggtgtgtttgaggtgctttccacatctggtgacacacaccttggtggcgatgacttcgataaggtatgtaattccatttttatttttaagagattaactactgccgaatctccattttggaatttcgtgaaaatacatcgcaactgttcgaactgttttctatggaatgttgcactatgcatttttgacaaatattatatgatgtggtgcctcttatgtgtattacattattctttctttggtaaactcacaatatcagtcaaccaaaatttctcaataggttgctcgttctatataattatgttattgcagttttatttctgttgggtattttactttggagccatgactcatgaaactcctgtaagtatgagctctgtgtgttttgtgctggaatctgacctcttcaagccttccatatattctttatgtaatgcccatgacctaaaaatatgtaatttgaacttttgaaagtcaacttaggcttcgttcgttcccgggtgatctgggagattgagagagaaaacatctcgttttccgcgcgcacgcttcccaaactattaaatggtgcgttttttgcaaaaaaaattccataagaaagttgctttaaaaaatcatattaatccatttttaaaatttaaaatagttaatactcaactaatcatacgctaatggctcacctcgttttgtgtatctttccaatcttcccaatctcctcaatccccttctcctcaaacacacccttagcatatcaaaggtctattggcattgtagtgtagctccatggacaacatacctatcagttgaactgattcttttactgacagtatgctatatttattgtttttttttaatttgaatgttatccttgaattatgtagaaagttgtggattggcttgctagcaactttaagaaagatgaaggcattgatcttctgaaagacaaacaagccctgcagcgactcactgaggcagcagagaaagcgaagatggaactgtctacgctgtctcagacaaacattaggtgagcttctttccaattgttctcacagagtattctattgctcatttggtgatttttcttcttaaataattgaatgtcttgaattgcagcttgcctttcataactgctactgctgatgggcctaaacacatcgagacaactctctccagagccaaatttgaggagctatgttcggacctcattgataggtaaaatatggacattctgctgatatataagcctattgcttaggaaaatgatttgcattttctcaaatttttttaaggcttgactaatatgtttcttattgataggcttaaaactcctgtcactaatgccttgagagatgccaaactgtctgttgataacctggacgaagtgattcttgttggtggatccactcgtatcccttccgtgcaagagcttgtgaagaagatcactggcaaggatcccaatgtcacagtcaaccctgatgaggttgtttctcttggggcagctgtacaggtcactttcttgtcctcacaagtgctttaatttgttgttctttgcagaaaatcatccataaaccttctaattacttcactgatcttaagtgcatgtttcctgcattatagtggatcacaaatcaatttatatgtatttaaaactaactgcccaaagcgtgttttaacactgccaagactgcatttatcttgttccgaatctgaaatctcaaatcaatatattttgtgtttcccttgtaacaccagggtggagttttggccggagatgtgaaagatgtcgttcttcttgatgttactccattgtctcttggtctggagacgttgggtggagtgatgaccaagattattcccagaaacacaacactgcccacctcaaaatcagaggtattctccacagctgcagatggacagacaagtgttgagataaatgttcttcagggagagagagagtttgtccgggacaacaagtctcttggaagcttccgcttggatggaatccctcctgcaccacgtggtgttccacaaattgaagtcaagtttgatattgatgccaatggtattctctctgttgctgctattgataagggtactgggaagaaacaggatatcaccatcaccggcgctagtacactgccaaaggatgaggtatgttcccaccttatttgcttaagcattgtgtgattacattcatcaaaagttggttgccagcttgctatattgcaactaggtacaaagttggcaagtttcttcttaacgtatgatagttttctgcatggttatctagttgtagattttcttttccaccatatgttgtgcagcttctttctttgattcccaatcccgttatttgctactggtgtgaaatttatttaccaaatttcttctattatggtagagtttttcatatctttaccagatcgcatgtattgactatttgtttgcatataatctatgttgatggaagagtaattgaattttttgtggtatagagtttaggtatcagttcctctagggaaacaacactatgctcctgtaagcgaagatacaaatgcctacattgaagcataacattcaatctgaaacaacattttgtgtttgtaggttgagagaatggtggaagaggctgacaagtttgctcaggaggacaaagagaaaagagatgccattgataccaaaaaccaggcagactctgtggtctaccagactgagaagcaactgaaggagctaggtgacaaggtacctgcacctgtgaaagagaaggtggatgcaaagctcaacgagctcaaagaggccattgcgggtggatcaacacagagcatgaaggatgccatggctgctttaaacgaggaagttatgcagatcggccaggccatgtacaaccagcagcctaatgctggtgctgctggacctactcctggtgccgatgctggaccgacaagctcaggcggtaagggaccgaatgatggagatgttattgatgcggatttcactgacagcaattgatagttctagcgattgaagattattgatggaaggatgatctgtggtggatggctgtgagggtctgatgggtgatggtataggaagaagggagtgaacaaattgttctttttgtttactatggatcccatgttcaataggctctttagtttgcaatttgatagcgtagggttttgccaacattttcctgtgatgttgaatgaaggattataaaaagtagccttcaaaaaaagaggaggcaaaggttttgatcgaagaagtagctgattgatatgaccttgttccttgaaaataaaaatatcattagttccctgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0244100, RefSeq:Os12g0244100